RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 GAGE5Q13069 117 aa9.5□□□□□ -0.89
COL11A1-211ENST00000635193 GAGE6Q13070 117 aa9.5□□□□□ -0.89
COL11A1-211ENST00000635193 C1QTNF4Q9BXJ3 329 aa9.5□□□□□ -0.89
COL11A1-211ENST00000635193 B5MCH6 92 aa9.49□□□□□ -0.89
COL11A1-211ENST00000635193 VCYO14598 125 aa9.49□□□□□ -0.89
COL11A1-211ENST00000635193 ZNF688P0C7X2 276 aa9.49□□□□□ -0.89
COL11A1-211ENST00000635193 IGHV1-8P0DP01 117 aa9.49□□□□□ -0.89
COL11A1-211ENST00000635193 PTPRDP23468 1912 aa9.49□□□□□ -0.89
COL11A1-211ENST00000635193 IGHV2-70DA0A0C4DH43 119 aa9.49□□□□□ -0.89
COL11A1-211ENST00000635193 HAX1O00165 279 aa9.49□□□□□ -0.89
COL11A1-211ENST00000635193 NTN3O00634 580 aaPredicted RBP9.49□□□□□ -0.89
COL11A1-211ENST00000635193 MLANAQ16655 118 aa9.49□□□□□ -0.89
COL11A1-211ENST00000635193 ZNF492Q9P255 531 aa9.49□□□□□ -0.89
COL11A1-211ENST00000635193 V9GYV3 84 aa9.49□□□□□ -0.89
COL11A1-211ENST00000635193 IGHV1-3A0A0C4DH29 117 aa9.49□□□□□ -0.89
COL11A1-211ENST00000635193 TCF15Q12870 199 aa9.49□□□□□ -0.89
COL11A1-211ENST00000635193 Q8TAT8 98 aa9.49□□□□□ -0.89
COL11A1-211ENST00000635193 PRDM6Q9NQX0 595 aa9.49□□□□□ -0.89
COL11A1-211ENST00000635193 LRRK1Q38SD2 2015 aa9.49□□□□□ -0.89
COL11A1-211ENST00000635193 PAX8Q06710 450 aa9.49□□□□□ -0.89
COL11A1-211ENST00000635193 LGALS9BQ3B8N2 356 aa9.49□□□□□ -0.89
COL11A1-211ENST00000635193 LGALS9CQ6DKI2 356 aa9.49□□□□□ -0.89
COL11A1-211ENST00000635193 RNASE8Q8TDE3 154 aaKnown RBP9.49□□□□□ -0.89
COL11A1-211ENST00000635193 ZSWIM8A7E2V4 1837 aa9.49□□□□□ -0.89
COL11A1-211ENST00000635193 MED12Q93074 2177 aa9.49□□□□□ -0.89
COL11A1-211ENST00000635193 TRGV11A0A075B6L2 103 aa9.48□□□□□ -0.89
COL11A1-211ENST00000635193 MALP21145 153 aa9.48□□□□□ -0.89
COL11A1-211ENST00000635193 B3GALT5-AS1P59052 145 aa9.48□□□□□ -0.89
COL11A1-211ENST00000635193 CT83Q5H943 113 aa9.48□□□□□ -0.89
COL11A1-211ENST00000635193 UNQ6494/PRO21346Q6UXR6 183 aa9.48□□□□□ -0.89
COL11A1-211ENST00000635193 LYPD1Q8N2G4 141 aa9.48□□□□□ -0.89
COL11A1-211ENST00000635193 ZNF876PQ49A33 203 aa9.48□□□□□ -0.89
COL11A1-211ENST00000635193 COLCA1Q6ZS62 124 aa9.48□□□□□ -0.89
COL11A1-211ENST00000635193 DEFB104AQ8WTQ1 72 aa9.48□□□□□ -0.89
COL11A1-211ENST00000635193 WFDC12Q8WWY7 111 aa9.48□□□□□ -0.89
COL11A1-211ENST00000635193 RNASE6Q93091 150 aaKnown RBP9.48□□□□□ -0.89
COL11A1-211ENST00000635193 ZNF625Q96I27 306 aaPredicted RBP9.48□□□□□ -0.89
COL11A1-211ENST00000635193 ACACAQ13085 2346 aa9.48□□□□□ -0.89
COL11A1-211ENST00000635193 TRGV2A0A075B6R0 118 aa9.48□□□□□ -0.89
COL11A1-211ENST00000635193 IGKV1D-17A0A075B6S4 117 aa9.48□□□□□ -0.89
COL11A1-211ENST00000635193 PAX4O43316 350 aa9.48□□□□□ -0.89
COL11A1-211ENST00000635193 INAFM2P0DMQ5 153 aa9.48□□□□□ -0.89
COL11A1-211ENST00000635193 LAMTOR3Q9UHA4 124 aa9.48□□□□□ -0.89
COL11A1-211ENST00000635193 DUSP14O95147 198 aaKnown RBP9.48□□□□□ -0.89
COL11A1-211ENST00000635193 TRACP01848 142 aa9.48□□□□□ -0.89
COL11A1-211ENST00000635193 NEGR1Q7Z3B1 354 aa9.48□□□□□ -0.89
COL11A1-211ENST00000635193 TIMM21Q9BVV7 248 aa9.48□□□□□ -0.89
COL11A1-211ENST00000635193 VWC2LB2RUY7 222 aa9.47□□□□□ -0.89
COL11A1-211ENST00000635193 CFHR2P36980 270 aa9.47□□□□□ -0.89
COL11A1-211ENST00000635193 VDAC2P45880 294 aaPredicted RBP9.47□□□□□ -0.89
COL11A1-211ENST00000635193 ZNF474Q6S9Z5 364 aaPredicted RBP9.47□□□□□ -0.89
COL11A1-211ENST00000635193 DNAJC30Q96LL9 226 aa9.47□□□□□ -0.89
COL11A1-211ENST00000635193 VGLL1Q99990 258 aa9.47□□□□□ -0.89
COL11A1-211ENST00000635193 Q0VFX4 171 aa9.47□□□□□ -0.89
COL11A1-211ENST00000635193 CEND1Q8N111 149 aa9.47□□□□□ -0.89
COL11A1-211ENST00000635193 RASL10AQ92737 203 aa9.47□□□□□ -0.89
COL11A1-211ENST00000635193 PLXNA3P51805 1871 aa9.47□□□□□ -0.89
COL11A1-211ENST00000635193 MYMXA0A1B0GTQ4 84 aa9.47□□□□□ -0.89
COL11A1-211ENST00000635193 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.47□□□□□ -0.89
COL11A1-211ENST00000635193 PMVKQ15126 192 aa9.47□□□□□ -0.89
COL11A1-211ENST00000635193 C15orf32Q32M92 178 aa9.47□□□□□ -0.89
COL11A1-211ENST00000635193 GAFA1Q96PS6 74 aa9.47□□□□□ -0.89
COL11A1-211ENST00000635193 ADARB2-AS1A8MUL3 147 aa9.47□□□□□ -0.89
COL11A1-211ENST00000635193 DEFB125Q8N687 156 aa9.47□□□□□ -0.89
COL11A1-211ENST00000635193 RNF5Q99942 180 aa9.47□□□□□ -0.89
COL11A1-211ENST00000635193 MYLKQ15746 1914 aa9.47□□□□□ -0.89
COL11A1-211ENST00000635193 SMIM27A0A1W2PRY6 76 aa9.47□□□□□ -0.89
COL11A1-211ENST00000635193 K7ERJ3 54 aa9.47□□□□□ -0.89
COL11A1-211ENST00000635193 FCN3O75636 299 aa9.47□□□□□ -0.89
COL11A1-211ENST00000635193 ZNF114Q8NC26 417 aa9.47□□□□□ -0.89
COL11A1-211ENST00000635193 RCHY1Q96PM5 261 aa9.47□□□□□ -0.89
COL11A1-211ENST00000635193 C7orf69Q9H7B7 122 aa9.47□□□□□ -0.89
COL11A1-211ENST00000635193 LEPROTO15243 131 aa9.46□□□□□ -0.89
COL11A1-211ENST00000635193 WNT2P09544 360 aa9.46□□□□□ -0.89
COL11A1-211ENST00000635193 HAPLN4Q86UW8 402 aa9.46□□□□□ -0.89
COL11A1-211ENST00000635193 C14orf178Q8N769 122 aaPredicted RBP9.46□□□□□ -0.89
COL11A1-211ENST00000635193 TMEM213A2RRL7 107 aa9.46□□□□□ -0.89
COL11A1-211ENST00000635193 SIVA1O15304 175 aa9.46□□□□□ -0.89
COL11A1-211ENST00000635193 SLC25A16P16260 332 aa9.46□□□□□ -0.89
COL11A1-211ENST00000635193 TAL2Q16559 108 aa9.46□□□□□ -0.89
COL11A1-211ENST00000635193 COA6Q5JTJ3 125 aaKnown RBP9.46□□□□□ -0.89
COL11A1-211ENST00000635193 FAM104BQ5XKR9 115 aa9.46□□□□□ -0.89
COL11A1-211ENST00000635193 IGKV1-16P04430 117 aa9.46□□□□□ -0.9
COL11A1-211ENST00000635193 AMTNQ6UX39 209 aa9.46□□□□□ -0.9
COL11A1-211ENST00000635193 SRSF8Q9BRL6 282 aaKnown RBP9.46□□□□□ -0.9
COL11A1-211ENST00000635193 TMEM178BH3BS89 294 aa9.46□□□□□ -0.9
COL11A1-211ENST00000635193 VWC2Q2TAL6 325 aa9.46□□□□□ -0.9
COL11A1-211ENST00000635193 FAM168AQ92567 244 aa9.46□□□□□ -0.9
COL11A1-211ENST00000635193 DOCK11Q5JSL3 2073 aa9.45□□□□□ -0.9
COL11A1-211ENST00000635193 OR11H6Q8NGC7 330 aa9.45□□□□□ -0.9
COL11A1-211ENST00000635193 JPT2Q9H910 190 aa9.45□□□□□ -0.9
COL11A1-211ENST00000635193 FAM231DQ6ZW35 169 aa9.45□□□□□ -0.9
COL11A1-211ENST00000635193 LYPD6BQ8NI32 183 aa9.45□□□□□ -0.9
COL11A1-211ENST00000635193 SIGLEC9Q9Y336 463 aa9.45□□□□□ -0.9
COL11A1-211ENST00000635193 IGKV1-39P01597 117 aa9.45□□□□□ -0.9
COL11A1-211ENST00000635193 IGKV1D-39P04432 117 aa9.45□□□□□ -0.9
COL11A1-211ENST00000635193 SRD5A1P18405 259 aa9.45□□□□□ -0.9
COL11A1-211ENST00000635193 SPACA3Q8IXA5 215 aa9.45□□□□□ -0.9
COL11A1-211ENST00000635193 SMIM20Q8N5G0 67 aa9.45□□□□□ -0.9
COL11A1-211ENST00000635193 VOPP1Q96AW1 172 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms