RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 CTSGP08311 255 aa11.11□□□□□ -0.63
LINC00339-208ENST00000634934 IGLC1P0CG04 106 aa11.11□□□□□ -0.63
LINC00339-208ENST00000634934 RPL29P47914 159 aaKnown RBP11.11□□□□□ -0.63
LINC00339-208ENST00000634934 PKIAP61925 76 aa11.11□□□□□ -0.63
LINC00339-208ENST00000634934 TIGITQ495A1 244 aa11.11□□□□□ -0.63
LINC00339-208ENST00000634934 SHISA2Q6UWI4 295 aa11.11□□□□□ -0.63
LINC00339-208ENST00000634934 RPUSD4Q96CM3 377 aaKnown RBP11.11□□□□□ -0.63
LINC00339-208ENST00000634934 ATP6V0BQ99437 205 aa11.11□□□□□ -0.63
LINC00339-208ENST00000634934 GGTLC1Q9BX51 225 aa11.11□□□□□ -0.63
LINC00339-208ENST00000634934 A0A1W2PPV4 95 aa11.1□□□□□ -0.63
LINC00339-208ENST00000634934 C9JCJ5 164 aa11.1□□□□□ -0.63
LINC00339-208ENST00000634934 LINC01619G3V211 115 aa11.1□□□□□ -0.63
LINC00339-208ENST00000634934 ADMP35318 185 aa11.1□□□□□ -0.63
LINC00339-208ENST00000634934 RAB31Q13636 194 aa11.1□□□□□ -0.63
LINC00339-208ENST00000634934 LBHQ53QV2 105 aaPredicted RBP11.1□□□□□ -0.63
LINC00339-208ENST00000634934 TEPPQ6URK8 271 aa11.1□□□□□ -0.63
LINC00339-208ENST00000634934 RAX2Q96IS3 184 aa11.1□□□□□ -0.63
LINC00339-208ENST00000634934 PACRGQ96M98 296 aaPredicted RBP11.1□□□□□ -0.63
LINC00339-208ENST00000634934 IGKV1D-37A0A075B6S9 117 aa11.09□□□□□ -0.63
LINC00339-208ENST00000634934 IGKV1OR2-108A0A075B7D4 117 aa11.09□□□□□ -0.63
LINC00339-208ENST00000634934 CCL24O00175 119 aa11.09□□□□□ -0.63
LINC00339-208ENST00000634934 IGKV1-17P01599 117 aa11.09□□□□□ -0.63
LINC00339-208ENST00000634934 NPPCP23582 126 aa11.09□□□□□ -0.63
LINC00339-208ENST00000634934 RPEL1Q2QD12 228 aa11.09□□□□□ -0.63
LINC00339-208ENST00000634934 THAP8Q8NA92 274 aa11.09□□□□□ -0.63
LINC00339-208ENST00000634934 HOXD3P31249 432 aaPredicted RBP11.09□□□□□ -0.63
LINC00339-208ENST00000634934 RHOBP62745 196 aa11.09□□□□□ -0.63
LINC00339-208ENST00000634934 ZNF90Q03938 601 aa11.09□□□□□ -0.63
LINC00339-208ENST00000634934 TRGV9Q99603 122 aa11.09□□□□□ -0.63
LINC00339-208ENST00000634934 MGST2Q99735 147 aa11.09□□□□□ -0.63
LINC00339-208ENST00000634934 PXMP4Q9Y6I8 212 aa11.09□□□□□ -0.63
LINC00339-208ENST00000634934 PKD1L1Q8TDX9 2849 aa11.08□□□□□ -0.64
LINC00339-208ENST00000634934 SLURP1P55000 103 aa11.08□□□□□ -0.64
LINC00339-208ENST00000634934 YPEL3P61236 119 aaPredicted RBP11.08□□□□□ -0.64
LINC00339-208ENST00000634934 PRR20EP86478 221 aa11.08□□□□□ -0.64
LINC00339-208ENST00000634934 PRR20CP86479 221 aa11.08□□□□□ -0.64
LINC00339-208ENST00000634934 PRR20DP86480 221 aa11.08□□□□□ -0.64
LINC00339-208ENST00000634934 PRR20BP86481 221 aa11.08□□□□□ -0.64
LINC00339-208ENST00000634934 PRR20AP86496 221 aa11.08□□□□□ -0.64
LINC00339-208ENST00000634934 RELQ04864 619 aaPredicted RBP11.08□□□□□ -0.64
LINC00339-208ENST00000634934 VWFP04275 2813 aa11.07□□□□□ -0.64
LINC00339-208ENST00000634934 ZNF320A2RRD8 509 aa11.07□□□□□ -0.64
LINC00339-208ENST00000634934 TSTD3H0UI37 97 aa11.07□□□□□ -0.64
LINC00339-208ENST00000634934 AMBPP02760 352 aa11.07□□□□□ -0.64
LINC00339-208ENST00000634934 PF4P02776 101 aa11.07□□□□□ -0.64
LINC00339-208ENST00000634934 RD3LP0DJH9 198 aa11.07□□□□□ -0.64
LINC00339-208ENST00000634934 FABP4P15090 132 aa11.07□□□□□ -0.64
LINC00339-208ENST00000634934 GFI1BQ5VTD9 330 aa11.07□□□□□ -0.64
LINC00339-208ENST00000634934 ZNF600Q6ZNG1 722 aa11.07□□□□□ -0.64
LINC00339-208ENST00000634934 OR4F17Q8NGA8 305 aa11.07□□□□□ -0.64
LINC00339-208ENST00000634934 IGHV3OR16-8A0A075B7F1 116 aa11.06□□□□□ -0.64
LINC00339-208ENST00000634934 OR10J4P0C629 311 aa11.06□□□□□ -0.64
LINC00339-208ENST00000634934 PSG1P11464 419 aa11.06□□□□□ -0.64
LINC00339-208ENST00000634934 GATA2P23769 480 aaPredicted RBP11.06□□□□□ -0.64
LINC00339-208ENST00000634934 MYCNOSP40205 109 aa11.06□□□□□ -0.64
LINC00339-208ENST00000634934 SYNJ2BPP57105 145 aa11.06□□□□□ -0.64
LINC00339-208ENST00000634934 FAM106AQ4KMX7 169 aa11.06□□□□□ -0.64
LINC00339-208ENST00000634934 GATAD1Q8WUU5 269 aa11.06□□□□□ -0.64
LINC00339-208ENST00000634934 TMEM18Q96B42 140 aa11.06□□□□□ -0.64
LINC00339-208ENST00000634934 SFRP2Q96HF1 295 aa11.06□□□□□ -0.64
LINC00339-208ENST00000634934 XKRY2A2RUG3 117 aa11.05□□□□□ -0.64
LINC00339-208ENST00000634934 NDUFA4O00483 81 aa11.05□□□□□ -0.64
LINC00339-208ENST00000634934 TOMM40O96008 361 aa11.05□□□□□ -0.64
LINC00339-208ENST00000634934 SELENOTP62341 195 aa11.05□□□□□ -0.64
LINC00339-208ENST00000634934 DEFA6Q01524 100 aa11.05□□□□□ -0.64
LINC00339-208ENST00000634934 FHL3Q13643 280 aa11.05□□□□□ -0.64
LINC00339-208ENST00000634934 COX19Q49B96 90 aa11.05□□□□□ -0.64
LINC00339-208ENST00000634934 GPHB5Q86YW7 130 aa11.05□□□□□ -0.64
LINC00339-208ENST00000634934 TMEM167BQ9NRX6 74 aa11.05□□□□□ -0.64
LINC00339-208ENST00000634934 SLC45A2Q9UMX9 530 aa11.05□□□□□ -0.64
LINC00339-208ENST00000634934 M0QZ24 198 aa11.04□□□□□ -0.64
LINC00339-208ENST00000634934 IL4P05112 153 aa11.04□□□□□ -0.64
LINC00339-208ENST00000634934 ARL14EPLP0DKL9 152 aa11.04□□□□□ -0.64
LINC00339-208ENST00000634934 ESDP10768 282 aa11.04□□□□□ -0.64
LINC00339-208ENST00000634934 GCHFRP30047 84 aa11.04□□□□□ -0.64
LINC00339-208ENST00000634934 MIC13Q5XKP0 118 aa11.04□□□□□ -0.64
LINC00339-208ENST00000634934 TOMM20LQ6UXN7 152 aa11.04□□□□□ -0.64
LINC00339-208ENST00000634934 UNQ9165/PRO28630Q6UXU0 137 aa11.04□□□□□ -0.64
LINC00339-208ENST00000634934 REC114Q7Z4M0 266 aa11.04□□□□□ -0.64
LINC00339-208ENST00000634934 DLX4Q92988 240 aaPredicted RBP11.04□□□□□ -0.64
LINC00339-208ENST00000634934 UHRF2Q96PU4 802 aa11.04□□□□□ -0.64
LINC00339-208ENST00000634934 RNF2Q99496 336 aa11.04□□□□□ -0.64
LINC00339-208ENST00000634934 CMYA5Q8N3K9 4069 aa11.04□□□□□ -0.64
LINC00339-208ENST00000634934 WNK1Q9H4A3 2382 aa11.04□□□□□ -0.64
LINC00339-208ENST00000634934 A0A1W2PPQ1 181 aa11.04□□□□□ -0.64
LINC00339-208ENST00000634934 NDUFB4O95168 129 aa11.04□□□□□ -0.64
LINC00339-208ENST00000634934 GZMBP10144 247 aa11.04□□□□□ -0.64
LINC00339-208ENST00000634934 CNN1P51911 297 aaKnown RBP11.04□□□□□ -0.64
LINC00339-208ENST00000634934 LYZP61626 148 aa11.04□□□□□ -0.64
LINC00339-208ENST00000634934 KLF5Q13887 457 aaPredicted RBP11.04□□□□□ -0.64
LINC00339-208ENST00000634934 LINC00469Q8N7U9 141 aa11.04□□□□□ -0.64
LINC00339-208ENST00000634934 STPG3Q8N7X2 389 aa11.04□□□□□ -0.64
LINC00339-208ENST00000634934 ZNF414Q96IQ9 312 aa11.04□□□□□ -0.64
LINC00339-208ENST00000634934 ELOVL1Q9BW60 279 aa11.04□□□□□ -0.64
LINC00339-208ENST00000634934 HMGB3O15347 200 aaKnown RBP11.03□□□□□ -0.64
LINC00339-208ENST00000634934 ZNF207O43670 478 aaKnown RBP11.03□□□□□ -0.64
LINC00339-208ENST00000634934 LINC00869P0C866 280 aa11.03□□□□□ -0.64
LINC00339-208ENST00000634934 DDTP30046 118 aa11.03□□□□□ -0.64
LINC00339-208ENST00000634934 ATP5G3P48201 142 aa11.03□□□□□ -0.64
LINC00339-208ENST00000634934 RPL19P84098 196 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms