RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 C16orf92Q96LL3 132 aa5.94□□□□□ -1.46
PKP4-217ENST00000628904 C8orf49Q96NF6 230 aa5.94□□□□□ -1.46
PKP4-217ENST00000628904 ATG101Q9BSB4 218 aa5.94□□□□□ -1.46
PKP4-217ENST00000628904 SRP14P37108 136 aaKnown RBP5.93□□□□□ -1.46
PKP4-217ENST00000628904 DLX6P56179 175 aa5.93□□□□□ -1.46
PKP4-217ENST00000628904 TWIST1Q15672 202 aa5.93□□□□□ -1.46
PKP4-217ENST00000628904 OR4B1Q8NGF8 309 aa5.93□□□□□ -1.46
PKP4-217ENST00000628904 C8orf46Q8TAG6 207 aa5.93□□□□□ -1.46
PKP4-217ENST00000628904 ZNF586Q9NXT0 402 aa5.93□□□□□ -1.46
PKP4-217ENST00000628904 COL27A1Q8IZC6 1860 aaPredicted RBP5.93□□□□□ -1.46
PKP4-217ENST00000628904 TRBV24-1A0A075B6N3 115 aa5.93□□□□□ -1.46
PKP4-217ENST00000628904 IGKV1D-37A0A075B6S9 117 aa5.93□□□□□ -1.46
PKP4-217ENST00000628904 TMEM238LA0A1B0GVL6 79 aa5.93□□□□□ -1.46
PKP4-217ENST00000628904 GOSR1O95249 250 aa5.93□□□□□ -1.46
PKP4-217ENST00000628904 VWC2Q2TAL6 325 aa5.93□□□□□ -1.46
PKP4-217ENST00000628904 CYB5R2Q6BCY4 276 aa5.93□□□□□ -1.46
PKP4-217ENST00000628904 PRSS3P2Q8NHM4 247 aa5.93□□□□□ -1.46
PKP4-217ENST00000628904 KLK15Q9H2R5 256 aa5.93□□□□□ -1.46
PKP4-217ENST00000628904 IFITM10A6NMD0 228 aa5.93□□□□□ -1.46
PKP4-217ENST00000628904 HOXB4P17483 251 aaPredicted RBP5.93□□□□□ -1.46
PKP4-217ENST00000628904 TMEM183AQ8IXX5 376 aa5.93□□□□□ -1.46
PKP4-217ENST00000628904 FXYD5Q96DB9 178 aa5.93□□□□□ -1.46
PKP4-217ENST00000628904 GCN1Q92616 2671 aaKnown RBP5.92□□□□□ -1.46
PKP4-217ENST00000628904 A0A1W2PRE2 83 aa5.92□□□□□ -1.46
PKP4-217ENST00000628904 TEX22C9J3V5 150 aa5.92□□□□□ -1.46
PKP4-217ENST00000628904 SMKR1H3BMG3 65 aa5.92□□□□□ -1.46
PKP4-217ENST00000628904 ITGB1BP1O14713 200 aa5.92□□□□□ -1.46
PKP4-217ENST00000628904 NCR2O95944 276 aa5.92□□□□□ -1.46
PKP4-217ENST00000628904 TCRAP04437 139 aa5.92□□□□□ -1.46
PKP4-217ENST00000628904 MAS1LP35410 378 aa5.92□□□□□ -1.46
PKP4-217ENST00000628904 ZNF738Q8NE65 137 aa5.92□□□□□ -1.46
PKP4-217ENST00000628904 OR8A1Q8NGG7 326 aa5.92□□□□□ -1.46
PKP4-217ENST00000628904 GPR82Q96P67 336 aa5.92□□□□□ -1.46
PKP4-217ENST00000628904 MRPL32Q9BYC8 188 aaKnown RBP5.92□□□□□ -1.46
PKP4-217ENST00000628904 FBN2P35556 2912 aa5.92□□□□□ -1.46
PKP4-217ENST00000628904 IGHV2-5P01817 119 aa5.92□□□□□ -1.46
PKP4-217ENST00000628904 SLAQ13239 276 aa5.92□□□□□ -1.46
PKP4-217ENST00000628904 POU2AF1Q16633 256 aa5.92□□□□□ -1.46
PKP4-217ENST00000628904 SP5Q6BEB4 398 aaPredicted RBP5.92□□□□□ -1.46
PKP4-217ENST00000628904 BEND2Q8NDZ0 799 aa5.92□□□□□ -1.46
PKP4-217ENST00000628904 NUP35Q8NFH5 326 aa5.92□□□□□ -1.46
PKP4-217ENST00000628904 C14orf144Q96I85 54 aa5.92□□□□□ -1.46
PKP4-217ENST00000628904 FAM167A-AS1Q96KT0 104 aa5.92□□□□□ -1.46
PKP4-217ENST00000628904 C18orf15Q96N68 181 aa5.92□□□□□ -1.46
PKP4-217ENST00000628904 TBL2Q9Y4P3 447 aaKnown RBP5.92□□□□□ -1.46
PKP4-217ENST00000628904 K7EIM0 57 aa5.92□□□□□ -1.46
PKP4-217ENST00000628904 ATP5G2Q06055 141 aa5.92□□□□□ -1.46
PKP4-217ENST00000628904 TMEM30BQ3MIR4 351 aa5.92□□□□□ -1.46
PKP4-217ENST00000628904 Q6ZS46 218 aa5.92□□□□□ -1.46
PKP4-217ENST00000628904 CENPVQ7Z7K6 275 aaPredicted RBP5.92□□□□□ -1.46
PKP4-217ENST00000628904 RCHY1Q96PM5 261 aa5.92□□□□□ -1.46
PKP4-217ENST00000628904 DMRT1Q9Y5R6 373 aa5.92□□□□□ -1.46
PKP4-217ENST00000628904 CENPVL3A0A0U1RRI6 287 aa5.91□□□□□ -1.46
PKP4-217ENST00000628904 F6UB75 175 aa5.91□□□□□ -1.46
PKP4-217ENST00000628904 BMPR1BO00238 502 aa5.91□□□□□ -1.46
PKP4-217ENST00000628904 HIST1H1AQ02539 215 aaPredicted RBP5.91□□□□□ -1.46
PKP4-217ENST00000628904 C10orf99Q6UWK7 81 aa5.91□□□□□ -1.46
PKP4-217ENST00000628904 LINC00322Q6ZN03 302 aaPredicted RBP5.91□□□□□ -1.46
PKP4-217ENST00000628904 ITPR2Q14571 2701 aa5.91□□□□□ -1.46
PKP4-217ENST00000628904 IGHV2-70DA0A0C4DH43 119 aa5.91□□□□□ -1.46
PKP4-217ENST00000628904 A8MWL6 223 aa5.91□□□□□ -1.46
PKP4-217ENST00000628904 DIRC3C9JPN6 131 aa5.91□□□□□ -1.46
PKP4-217ENST00000628904 TRBV12-3P01733 135 aa5.91□□□□□ -1.46
PKP4-217ENST00000628904 EVI2AP22794 236 aa5.91□□□□□ -1.46
PKP4-217ENST00000628904 TDRG1Q3Y452 100 aa5.91□□□□□ -1.46
PKP4-217ENST00000628904 ZNF562Q6V9R5 426 aa5.91□□□□□ -1.46
PKP4-217ENST00000628904 BBC3Q96PG8 261 aaPredicted RBP5.91□□□□□ -1.46
PKP4-217ENST00000628904 VAMP8Q9BV40 100 aa5.91□□□□□ -1.46
PKP4-217ENST00000628904 PSG8Q9UQ74 426 aa5.91□□□□□ -1.46
PKP4-217ENST00000628904 IGHV3OR16-12A0A075B7B8 117 aa5.91□□□□□ -1.46
PKP4-217ENST00000628904 IGHV7-81A0A0B4J1V7 117 aa5.91□□□□□ -1.46
PKP4-217ENST00000628904 TMEM189A5PLL7 270 aa5.91□□□□□ -1.46
PKP4-217ENST00000628904 APOHP02749 345 aaPredicted RBP5.91□□□□□ -1.46
PKP4-217ENST00000628904 LINC00311Q8N616 119 aa5.91□□□□□ -1.46
PKP4-217ENST00000628904 ZNF491Q8N8L2 437 aa5.91□□□□□ -1.46
PKP4-217ENST00000628904 NDFIP1Q9BT67 221 aa5.91□□□□□ -1.46
PKP4-217ENST00000628904 CDC42EP3Q9UKI2 254 aa5.91□□□□□ -1.46
PKP4-217ENST00000628904 V9GYV3 84 aa5.91□□□□□ -1.46
PKP4-217ENST00000628904 M0R381 172 aa5.9□□□□□ -1.46
PKP4-217ENST00000628904 FOLR2P14207 255 aa5.9□□□□□ -1.46
PKP4-217ENST00000628904 ARL3P36405 182 aa5.9□□□□□ -1.46
PKP4-217ENST00000628904 TNFRSF14Q92956 283 aa5.9□□□□□ -1.46
PKP4-217ENST00000628904 METTL26Q96S19 204 aa5.9□□□□□ -1.46
PKP4-217ENST00000628904 ATRQ13535 2644 aa5.9□□□□□ -1.46
PKP4-217ENST00000628904 IGHV4-59P01825 116 aa5.9□□□□□ -1.47
PKP4-217ENST00000628904 KRTAP10-9P60411 292 aa5.9□□□□□ -1.47
PKP4-217ENST00000628904 VGLL1Q99990 258 aa5.9□□□□□ -1.47
PKP4-217ENST00000628904 TRAV41A0A0B4J266 112 aa5.9□□□□□ -1.47
PKP4-217ENST00000628904 F5H697 171 aa5.9□□□□□ -1.47
PKP4-217ENST00000628904 OVOL3O00110 214 aa5.9□□□□□ -1.47
PKP4-217ENST00000628904 ARMS2P0C7Q2 107 aa5.9□□□□□ -1.47
PKP4-217ENST00000628904 DEFB136Q30KP8 78 aa5.9□□□□□ -1.47
PKP4-217ENST00000628904 KCNS1Q96KK3 526 aa5.9□□□□□ -1.47
PKP4-217ENST00000628904 TRGV9Q99603 122 aa5.9□□□□□ -1.47
PKP4-217ENST00000628904 TMEM213A2RRL7 107 aa5.89□□□□□ -1.47
PKP4-217ENST00000628904 I3L2K1 104 aa5.89□□□□□ -1.47
PKP4-217ENST00000628904 MGPP08493 103 aa5.89□□□□□ -1.47
PKP4-217ENST00000628904 RPL7P18124 248 aaKnown RBP5.89□□□□□ -1.47
PKP4-217ENST00000628904 FAM71F2Q6NXP2 309 aa5.89□□□□□ -1.47
PKP4-217ENST00000628904 FA2HQ7L5A8 372 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms