RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 XKRY2A2RUG3 117 aa15.24■□□□□ 0.03
CHRNA4-209ENST00000627000 IGLV2-11P01706 119 aa15.24■□□□□ 0.03
CHRNA4-209ENST00000627000 BLCAPP62952 87 aa15.24■□□□□ 0.03
CHRNA4-209ENST00000627000 COA6Q5JTJ3 125 aaKnown RBP15.24■□□□□ 0.03
CHRNA4-209ENST00000627000 S100A7AQ86SG5 101 aa15.24■□□□□ 0.03
CHRNA4-209ENST00000627000 EEF1AKMT3Q96AZ1 226 aa15.24■□□□□ 0.03
CHRNA4-209ENST00000627000 C2orf88Q9BSF0 95 aa15.24■□□□□ 0.03
CHRNA4-209ENST00000627000 ZFAND3Q9H8U3 227 aa15.24■□□□□ 0.03
CHRNA4-209ENST00000627000 RNF24Q9Y225 148 aa15.24■□□□□ 0.03
CHRNA4-209ENST00000627000 SMIM27A0A1W2PRY6 76 aa15.23■□□□□ 0.03
CHRNA4-209ENST00000627000 M0R3E3 92 aa15.23■□□□□ 0.03
CHRNA4-209ENST00000627000 TGFAP01135 160 aa15.23■□□□□ 0.03
CHRNA4-209ENST00000627000 IER3P46695 156 aa15.23■□□□□ 0.03
CHRNA4-209ENST00000627000 CRIP2P52943 208 aaPredicted RBP15.23■□□□□ 0.03
CHRNA4-209ENST00000627000 MBD6Q96DN6 1003 aa15.23■□□□□ 0.03
CHRNA4-209ENST00000627000 ASCL2Q99929 193 aa15.23■□□□□ 0.03
CHRNA4-209ENST00000627000 Q86TA4 180 aa15.22■□□□□ 0.03
CHRNA4-209ENST00000627000 A0A1B0GV90 55 aa15.22■□□□□ 0.03
CHRNA4-209ENST00000627000 BMPR1BO00238 502 aa15.22■□□□□ 0.03
CHRNA4-209ENST00000627000 PRNTQ86SH4 94 aa15.22■□□□□ 0.03
CHRNA4-209ENST00000627000 PRO1933Q9H354 126 aa15.22■□□□□ 0.03
CHRNA4-209ENST00000627000 SMAD5-AS1Q9Y6J3 95 aa15.22■□□□□ 0.03
CHRNA4-209ENST00000627000 ATP5G2Q06055 141 aa15.21■□□□□ 0.03
CHRNA4-209ENST00000627000 LYPD1Q8N2G4 141 aa15.21■□□□□ 0.03
CHRNA4-209ENST00000627000 CR1P17927 2039 aa15.21■□□□□ 0.03
CHRNA4-209ENST00000627000 IGHG2P01859 326 aa15.21■□□□□ 0.02
CHRNA4-209ENST00000627000 IGF1P05019 195 aa15.21■□□□□ 0.02
CHRNA4-209ENST00000627000 CIARTQ8N365 385 aaPredicted RBP15.21■□□□□ 0.02
CHRNA4-209ENST00000627000 SMIM12Q96EX1 92 aa15.21■□□□□ 0.02
CHRNA4-209ENST00000627000 ABCA12Q86UK0 2595 aa15.2■□□□□ 0.02
CHRNA4-209ENST00000627000 TRBV7-1A0A0A6YYK4 115 aa15.2■□□□□ 0.02
CHRNA4-209ENST00000627000 TRGV3P03979 118 aa15.2■□□□□ 0.02
CHRNA4-209ENST00000627000 RPL7P18124 248 aaKnown RBP15.2■□□□□ 0.02
CHRNA4-209ENST00000627000 DEFB113Q30KQ7 82 aa15.2■□□□□ 0.02
CHRNA4-209ENST00000627000 DEFB112Q30KQ8 113 aa15.2■□□□□ 0.02
CHRNA4-209ENST00000627000 GRAMD2BQ96HH9 432 aa15.2■□□□□ 0.02
CHRNA4-209ENST00000627000 MRPL18Q9H0U6 180 aaKnown RBP15.2■□□□□ 0.02
CHRNA4-209ENST00000627000 SNURFLB1AK76 121 aa15.19■□□□□ 0.02
CHRNA4-209ENST00000627000 MRPL54Q6P161 138 aaKnown RBP15.19■□□□□ 0.02
CHRNA4-209ENST00000627000 A0A1B0GUS0 222 aa15.19■□□□□ 0.02
CHRNA4-209ENST00000627000 CLPSL1A2RUU4 121 aa15.19■□□□□ 0.02
CHRNA4-209ENST00000627000 DIRC3C9JPN6 131 aa15.19■□□□□ 0.02
CHRNA4-209ENST00000627000 AMBPP02760 352 aa15.19■□□□□ 0.02
CHRNA4-209ENST00000627000 LOXL1Q08397 574 aaPredicted RBP15.19■□□□□ 0.02
CHRNA4-209ENST00000627000 PDE6HQ13956 83 aa15.19■□□□□ 0.02
CHRNA4-209ENST00000627000 ZANQ9Y493 2812 aa15.19■□□□□ 0.02
CHRNA4-209ENST00000627000 IGHV3-66A0A0C4DH42 116 aa15.18■□□□□ 0.02
CHRNA4-209ENST00000627000 PPIFP30405 207 aaKnown RBP15.18■□□□□ 0.02
CHRNA4-209ENST00000627000 TMEM18Q96B42 140 aa15.18■□□□□ 0.02
CHRNA4-209ENST00000627000 NDUFAF3Q9BU61 184 aa15.18■□□□□ 0.02
CHRNA4-209ENST00000627000 IGHV3OR16-13A0A075B7E8 117 aa15.18■□□□□ 0.02
CHRNA4-209ENST00000627000 IGHV3-74A0A0B4J1X5 117 aa15.18■□□□□ 0.02
CHRNA4-209ENST00000627000 C19orf71A6NCJ1 209 aa15.18■□□□□ 0.02
CHRNA4-209ENST00000627000 IZUMO1RA6ND01 250 aa15.18■□□□□ 0.02
CHRNA4-209ENST00000627000 IGHV4-59P01825 116 aa15.18■□□□□ 0.02
CHRNA4-209ENST00000627000 GZMBP10144 247 aa15.18■□□□□ 0.02
CHRNA4-209ENST00000627000 TPPP2P59282 170 aa15.18■□□□□ 0.02
CHRNA4-209ENST00000627000 Q5PR19 223 aa15.18■□□□□ 0.02
CHRNA4-209ENST00000627000 IGFL4Q6B9Z1 124 aa15.18■□□□□ 0.02
CHRNA4-209ENST00000627000 AAMDCQ9H7C9 122 aa15.18■□□□□ 0.02
CHRNA4-209ENST00000627000 FAM223BA6NKX1 122 aa15.17■□□□□ 0.02
CHRNA4-209ENST00000627000 A8MWP6 167 aa15.17■□□□□ 0.02
CHRNA4-209ENST00000627000 ZNF207O43670 478 aaKnown RBP15.17■□□□□ 0.02
CHRNA4-209ENST00000627000 APOHP02749 345 aaPredicted RBP15.17■□□□□ 0.02
CHRNA4-209ENST00000627000 IGHV4-31P0DP07 118 aa15.17■□□□□ 0.02
CHRNA4-209ENST00000627000 FAM223AQ8IWN6 122 aa15.17■□□□□ 0.02
CHRNA4-209ENST00000627000 TMEM75Q8N9X5 138 aa15.17■□□□□ 0.02
CHRNA4-209ENST00000627000 BEX4Q9NWD9 120 aaPredicted RBP15.17■□□□□ 0.02
CHRNA4-209ENST00000627000 ZNF785A8K8V0 405 aa15.17■□□□□ 0.02
CHRNA4-209ENST00000627000 M0QZK8 103 aa15.17■□□□□ 0.02
CHRNA4-209ENST00000627000 BUB3O43684 328 aa15.17■□□□□ 0.02
CHRNA4-209ENST00000627000 NUP35Q8NFH5 326 aa15.17■□□□□ 0.02
CHRNA4-209ENST00000627000 GNB1LQ9BYB4 327 aa15.17■□□□□ 0.02
CHRNA4-209ENST00000627000 PRSS22Q9GZN4 317 aa15.17■□□□□ 0.02
CHRNA4-209ENST00000627000 PSG8Q9UQ74 426 aa15.17■□□□□ 0.02
CHRNA4-209ENST00000627000 IGHV3-49A0A0A0MS15 119 aa15.16■□□□□ 0.02
CHRNA4-209ENST00000627000 J3QLI3 93 aa15.16■□□□□ 0.02
CHRNA4-209ENST00000627000 TRBV12-3P01733 135 aa15.16■□□□□ 0.02
CHRNA4-209ENST00000627000 HLA-DMBP28068 263 aa15.16■□□□□ 0.02
CHRNA4-209ENST00000627000 PSG3Q16557 428 aa15.16■□□□□ 0.02
CHRNA4-209ENST00000627000 TMEM136Q6ZRR5 245 aa15.16■□□□□ 0.02
CHRNA4-209ENST00000627000 NEU1Q99519 415 aa15.16■□□□□ 0.02
CHRNA4-209ENST00000627000 KLK15Q9H2R5 256 aa15.16■□□□□ 0.02
CHRNA4-209ENST00000627000 ZNF492Q9P255 531 aa15.16■□□□□ 0.02
CHRNA4-209ENST00000627000 GRIFINA4D1Z8 144 aa15.15■□□□□ 0.02
CHRNA4-209ENST00000627000 LCNL1Q6ZST4 164 aa15.15■□□□□ 0.02
CHRNA4-209ENST00000627000 TSKUQ8WUA8 353 aa15.15■□□□□ 0.02
CHRNA4-209ENST00000627000 RPP21Q9H633 154 aaKnown RBP15.15■□□□□ 0.02
CHRNA4-209ENST00000627000 TRBV6-1A0A0K0K1D8 114 aa15.15■□□□□ 0.02
CHRNA4-209ENST00000627000 P01737 135 aa15.15■□□□□ 0.02
CHRNA4-209ENST00000627000 PSG9Q00887 426 aa15.15■□□□□ 0.02
CHRNA4-209ENST00000627000 IQCJQ1A5X6 159 aa15.15■□□□□ 0.02
CHRNA4-209ENST00000627000 HIST2H2BCQ6DN03 193 aa15.15■□□□□ 0.02
CHRNA4-209ENST00000627000 TCF24Q7RTU0 167 aa15.15■□□□□ 0.02
CHRNA4-209ENST00000627000 ZC2HC1AQ96GY0 325 aa15.15■□□□□ 0.02
CHRNA4-209ENST00000627000 NAT8BQ9UHF3 227 aa15.15■□□□□ 0.02
CHRNA4-209ENST00000627000 NAV2Q8IVL1 2488 aa15.14■□□□□ 0.01
CHRNA4-209ENST00000627000 HIGD1CA8MV81 97 aa15.14■□□□□ 0.01
CHRNA4-209ENST00000627000 K7EQM0 130 aa15.14■□□□□ 0.01
CHRNA4-209ENST00000627000 TMEM95Q3KNT9 176 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms