RNA–Protein interactions for RNA: ENST00000626874.2

CHD2-208, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 1 (best) BASIC

Gene CHD2, Length 7,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-208	ENST00000626874	MDS2	Q8NDY4	140 aa		5.64	□□□□□ -1.51
CHD2-208	ENST00000626874	GPHA2	Q96T91	129 aa		5.64	□□□□□ -1.51
CHD2-208	ENST00000626874	NCOR1P1	Q9H4R4	102 aa		5.64	□□□□□ -1.51
CHD2-208	ENST00000626874	TRBV6-6	A0A0A6YYG2	114 aa		5.64	□□□□□ -1.51
CHD2-208	ENST00000626874	FGF16	O43320	207 aa		5.64	□□□□□ -1.51
CHD2-208	ENST00000626874	IGHV3-53	P01767	116 aa		5.64	□□□□□ -1.51
CHD2-208	ENST00000626874	SSBP2	P81877	361 aa	Predicted RBP	5.64	□□□□□ -1.51
CHD2-208	ENST00000626874	LINC00114	Q6XXX2	140 aa		5.64	□□□□□ -1.51
CHD2-208	ENST00000626874	NDUFB1	O75438	58 aa		5.64	□□□□□ -1.51
CHD2-208	ENST00000626874	CTAG1A	P78358	180 aa		5.64	□□□□□ -1.51
CHD2-208	ENST00000626874	ESD	P10768	282 aa		5.64	□□□□□ -1.51
CHD2-208	ENST00000626874	PPIF	P30405	207 aa	Known RBP	5.64	□□□□□ -1.51
CHD2-208	ENST00000626874	CDKN1B	P46527	198 aa		5.64	□□□□□ -1.51
CHD2-208	ENST00000626874	TMEM242	Q9NWH2	141 aa		5.64	□□□□□ -1.51
CHD2-208	ENST00000626874	LYNX1	G3V0Z9	82 aa		5.64	□□□□□ -1.51
CHD2-208	ENST00000626874	RAMP1	O60894	148 aa		5.64	□□□□□ -1.51
CHD2-208	ENST00000626874	LYNX1	P0DP58	116 aa		5.64	□□□□□ -1.51
CHD2-208	ENST00000626874	MPZ	P25189	248 aa		5.64	□□□□□ -1.51
CHD2-208	ENST00000626874	REG4	Q9BYZ8	158 aa		5.64	□□□□□ -1.51
CHD2-208	ENST00000626874	NYNRIN	Q9P2P1	1898 aa	Known RBP	5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	SRP19	P09132	144 aa	Known RBP	5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	DMRTC2	Q8IXT2	367 aa	Predicted RBP	5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	C1orf43	Q9BWL3	253 aa		5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	IGHV1-24	A0A0C4DH33	117 aa		5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	MUC21	A0A0G2JKD1	596 aa		5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	MUC21	A0A140T8X8	626 aa		5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	RAMP3	O60896	148 aa		5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	IGKV2D-40	P01614	121 aa	Predicted RBP	5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	GNG5	P63218	68 aa		5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	MPV17L2	Q567V2	206 aa		5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	STPG4	Q8N801	248 aa		5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	TMEM75	Q8N9X5	138 aa		5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	RNASE7	Q9H1E1	156 aa	Known RBP	5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	WDR83OS	Q9Y284	106 aa		5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	ATP5G3	P48201	142 aa		5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	YPEL3	P61236	119 aa	Predicted RBP	5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	RPL23	P62829	140 aa	Known RBP	5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	IGHV3-73	A0A0B4J1V6	119 aa		5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	HERVK_113	P63121	156 aa		5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	C1QL2	Q7Z5L3	287 aa		5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	FOXF2	Q12947	444 aa		5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	SAMD5	Q5TGI4	173 aa		5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	TMEM170A	Q8WVE7	144 aa		5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	C14orf144	Q96I85	54 aa		5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	C1QTNF9	P0C862	333 aa		5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	MDK	P21741	143 aa	Predicted RBP	5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	TCTEX1D4	Q5JR98	221 aa		5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	GFI1B	Q5VTD9	330 aa		5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	KIR2DL5B	Q8NHK3	375 aa		5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	ZNF503	Q96F45	646 aa		5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	SIGMAR1	Q99720	223 aa		5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	CARHSP1	Q9Y2V2	147 aa	Known RBP	5.63	□□□□□ -1.51
CHD2-208	ENST00000626874	TRBV20-1	A0A075B6N2	111 aa		5.62	□□□□□ -1.51
CHD2-208	ENST00000626874		A0A1B0GV90	55 aa		5.62	□□□□□ -1.51
CHD2-208	ENST00000626874	C5orf63	A6NC05	138 aa		5.62	□□□□□ -1.51
CHD2-208	ENST00000626874	PIN1P1	O15428	100 aa		5.62	□□□□□ -1.51
CHD2-208	ENST00000626874	FUS	P35637	526 aa	Known RBP eCLIP	5.62	□□□□□ -1.51
CHD2-208	ENST00000626874		Q0VFX4	171 aa		5.62	□□□□□ -1.51
CHD2-208	ENST00000626874	FAM219B	Q5XKK7	198 aa		5.62	□□□□□ -1.51
CHD2-208	ENST00000626874	GLRX5	Q86SX6	157 aa		5.62	□□□□□ -1.51
CHD2-208	ENST00000626874	CLPS	P04118	112 aa		5.62	□□□□□ -1.51
CHD2-208	ENST00000626874	ZNF474	Q6S9Z5	364 aa	Predicted RBP	5.62	□□□□□ -1.51
CHD2-208	ENST00000626874	RTBDN	Q9BSG5	229 aa	Predicted RBP	5.62	□□□□□ -1.51
CHD2-208	ENST00000626874	IGHV1OR15-1	A0A075B7D0	117 aa		5.62	□□□□□ -1.51
CHD2-208	ENST00000626874		A0A0U1RRA0	63 aa		5.62	□□□□□ -1.51
CHD2-208	ENST00000626874	UTF1	Q5T230	341 aa		5.62	□□□□□ -1.51
CHD2-208	ENST00000626874		A8MXK9	166 aa		5.62	□□□□□ -1.51
CHD2-208	ENST00000626874	NDUFS5	O43920	106 aa		5.62	□□□□□ -1.51
CHD2-208	ENST00000626874	EGR2	P11161	476 aa	Predicted RBP	5.62	□□□□□ -1.51
CHD2-208	ENST00000626874	H2BFS	P57053	126 aa		5.62	□□□□□ -1.51
CHD2-208	ENST00000626874	SPRED2	Q7Z698	418 aa		5.62	□□□□□ -1.51
CHD2-208	ENST00000626874		K7EMI3	77 aa		5.62	□□□□□ -1.51
CHD2-208	ENST00000626874	SH2D1A	O60880	128 aa		5.62	□□□□□ -1.51
CHD2-208	ENST00000626874	WISP1	O95388	367 aa		5.62	□□□□□ -1.51
CHD2-208	ENST00000626874	TCRA	P04437	139 aa		5.62	□□□□□ -1.51
CHD2-208	ENST00000626874	SPART-AS1	P0CW21	52 aa		5.62	□□□□□ -1.51
CHD2-208	ENST00000626874	KLRD1	Q13241	179 aa		5.62	□□□□□ -1.51
CHD2-208	ENST00000626874	GGN	Q86UU5	652 aa		5.62	□□□□□ -1.51
CHD2-208	ENST00000626874	VPREB3	Q9UKI3	123 aa		5.62	□□□□□ -1.51
CHD2-208	ENST00000626874	IGHV3-64	A0A075B6Q5	118 aa		5.61	□□□□□ -1.51
CHD2-208	ENST00000626874	ANG	P03950	147 aa	Known RBP	5.61	□□□□□ -1.51
CHD2-208	ENST00000626874	PYY	P10082	97 aa		5.61	□□□□□ -1.51
CHD2-208	ENST00000626874		Q8NFD4	153 aa		5.61	□□□□□ -1.51
CHD2-208	ENST00000626874	GAFA1	Q96PS6	74 aa		5.61	□□□□□ -1.51
CHD2-208	ENST00000626874	FAM231B	A6NCW3	169 aa		5.61	□□□□□ -1.51
CHD2-208	ENST00000626874		D6R8Y8	96 aa		5.61	□□□□□ -1.51
CHD2-208	ENST00000626874	OVOL3	O00110	214 aa		5.61	□□□□□ -1.51
CHD2-208	ENST00000626874	EFNA2	O43921	213 aa		5.61	□□□□□ -1.51
CHD2-208	ENST00000626874	MRPL23	Q16540	153 aa	Known RBP	5.61	□□□□□ -1.51
CHD2-208	ENST00000626874	C1orf122	Q6ZSJ8	110 aa		5.61	□□□□□ -1.51
CHD2-208	ENST00000626874		Q8TCH9	128 aa		5.61	□□□□□ -1.51
CHD2-208	ENST00000626874	SCRT1	Q9BWW7	348 aa		5.61	□□□□□ -1.51
CHD2-208	ENST00000626874	TMEM14B	Q9NUH8	114 aa		5.61	□□□□□ -1.51
CHD2-208	ENST00000626874	TRAV1-1	A0A0B4J248	108 aa		5.61	□□□□□ -1.51
CHD2-208	ENST00000626874	CFHR2	P36980	270 aa		5.61	□□□□□ -1.51
CHD2-208	ENST00000626874	BCL6B	Q8N143	479 aa	Predicted RBP	5.61	□□□□□ -1.51
CHD2-208	ENST00000626874	DEPP	Q9NTK1	212 aa		5.61	□□□□□ -1.51
CHD2-208	ENST00000626874	MRPL36	Q9P0J6	103 aa	Known RBP	5.61	□□□□□ -1.51
CHD2-208	ENST00000626874	ZSWIM8	A7E2V4	1837 aa		5.61	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms