RNA–Protein interactions for RNA: ENST00000625672.2

NRXN1-222, Transcript of neurexin 1, human

TSL 1 (best) BASIC

Gene NRXN1, Length 8,113 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-222	ENST00000625672	DOCK8	Q8NF50	2099 aa		11.32	□□□□□ -0.6
NRXN1-222	ENST00000625672	NTN3	O00634	580 aa	Predicted RBP	11.31	□□□□□ -0.6
NRXN1-222	ENST00000625672	SPATA31B1P	Q5VZV4	182 aa		11.31	□□□□□ -0.6
NRXN1-222	ENST00000625672	PAQR4	Q8N4S7	273 aa	Predicted RBP	11.31	□□□□□ -0.6
NRXN1-222	ENST00000625672	CD177	Q8N6Q3	437 aa		11.31	□□□□□ -0.6
NRXN1-222	ENST00000625672	TREML4	Q6UXN2	200 aa		11.31	□□□□□ -0.6
NRXN1-222	ENST00000625672	IGF2BP2-AS1	Q96M15	143 aa		11.31	□□□□□ -0.6
NRXN1-222	ENST00000625672	KLK9	Q9UKQ9	250 aa		11.31	□□□□□ -0.6
NRXN1-222	ENST00000625672	COL24A1	Q17RW2	1714 aa		11.31	□□□□□ -0.6
NRXN1-222	ENST00000625672	IGFBP3	P17936	291 aa	Predicted RBP	11.31	□□□□□ -0.6
NRXN1-222	ENST00000625672	GAGE6	Q13070	117 aa		11.31	□□□□□ -0.6
NRXN1-222	ENST00000625672	TMEM158	Q8WZ71	300 aa		11.31	□□□□□ -0.6
NRXN1-222	ENST00000625672	SIGLEC9	Q9Y336	463 aa		11.31	□□□□□ -0.6
NRXN1-222	ENST00000625672	TBX6	O95947	436 aa	Predicted RBP	11.31	□□□□□ -0.6
NRXN1-222	ENST00000625672	FBLIM1	Q8WUP2	373 aa		11.31	□□□□□ -0.6
NRXN1-222	ENST00000625672	LYPD2	Q6UXB3	125 aa		11.31	□□□□□ -0.6
NRXN1-222	ENST00000625672	SMKR1	H3BMG3	65 aa		11.3	□□□□□ -0.6
NRXN1-222	ENST00000625672	CR1L	Q2VPA4	569 aa		11.3	□□□□□ -0.6
NRXN1-222	ENST00000625672	CLPSL2	Q6UWE3	100 aa		11.3	□□□□□ -0.6
NRXN1-222	ENST00000625672	GAFA1	Q96PS6	74 aa		11.3	□□□□□ -0.6
NRXN1-222	ENST00000625672	BCL6B	Q8N143	479 aa	Predicted RBP	11.3	□□□□□ -0.6
NRXN1-222	ENST00000625672	TEX48	A0A1B0GUV7	120 aa		11.3	□□□□□ -0.6
NRXN1-222	ENST00000625672	MDS2	Q8NDY4	140 aa		11.3	□□□□□ -0.6
NRXN1-222	ENST00000625672	RFNG	Q9Y644	331 aa		11.3	□□□□□ -0.6
NRXN1-222	ENST00000625672	COL5A3	P25940	1745 aa	Predicted RBP	11.3	□□□□□ -0.6
NRXN1-222	ENST00000625672	ERVH48-1	M5A8F1	160 aa		11.3	□□□□□ -0.6
NRXN1-222	ENST00000625672	SMIM2	Q9BVW6	85 aa		11.3	□□□□□ -0.6
NRXN1-222	ENST00000625672	RALGAPA2	Q2PPJ7	1873 aa		11.29	□□□□□ -0.6
NRXN1-222	ENST00000625672	IGKV2D-24	A0A075B6R9	120 aa		11.29	□□□□□ -0.6
NRXN1-222	ENST00000625672		A6NNC1	897 aa		11.29	□□□□□ -0.6
NRXN1-222	ENST00000625672	IGHG3	P01860	377 aa		11.29	□□□□□ -0.6
NRXN1-222	ENST00000625672	NXPH4	O95158	308 aa		11.29	□□□□□ -0.6
NRXN1-222	ENST00000625672	GGN	Q86UU5	652 aa		11.29	□□□□□ -0.6
NRXN1-222	ENST00000625672	ANG	P03950	147 aa	Known RBP	11.29	□□□□□ -0.6
NRXN1-222	ENST00000625672	VWCE	Q96DN2	955 aa		11.29	□□□□□ -0.6
NRXN1-222	ENST00000625672	ACACA	Q13085	2346 aa		11.29	□□□□□ -0.6
NRXN1-222	ENST00000625672	TRAV3	A0A0B4J244	114 aa		11.29	□□□□□ -0.6
NRXN1-222	ENST00000625672	EFNA2	O43921	213 aa		11.29	□□□□□ -0.6
NRXN1-222	ENST00000625672	IGKV1-5	P01602	117 aa		11.29	□□□□□ -0.6
NRXN1-222	ENST00000625672	NAA38	Q9BRA0	125 aa	Known RBP	11.29	□□□□□ -0.6
NRXN1-222	ENST00000625672	CARHSP1	Q9Y2V2	147 aa	Known RBP	11.28	□□□□□ -0.6
NRXN1-222	ENST00000625672	NEUROG3	Q9Y4Z2	214 aa		11.28	□□□□□ -0.6
NRXN1-222	ENST00000625672	IGKV1-9	A0A0C4DH69	117 aa		11.28	□□□□□ -0.6
NRXN1-222	ENST00000625672	PRSS29P	A6NIE9	313 aa		11.28	□□□□□ -0.6
NRXN1-222	ENST00000625672	FOXG1	P55316	489 aa	Predicted RBP	11.28	□□□□□ -0.6
NRXN1-222	ENST00000625672	IGKV1OR2-108	A0A075B7D4	117 aa		11.28	□□□□□ -0.6
NRXN1-222	ENST00000625672	IGLV3-32	A0A0A0MS00	114 aa		11.28	□□□□□ -0.6
NRXN1-222	ENST00000625672	IFITM2	Q01629	132 aa		11.28	□□□□□ -0.6
NRXN1-222	ENST00000625672	LINC00518	Q8N0U6	118 aa		11.28	□□□□□ -0.6
NRXN1-222	ENST00000625672	TMEM190	Q8WZ59	177 aa		11.28	□□□□□ -0.6
NRXN1-222	ENST00000625672	SCRT2	Q9NQ03	307 aa		11.28	□□□□□ -0.6
NRXN1-222	ENST00000625672	SOCS3	O14543	225 aa		11.28	□□□□□ -0.6
NRXN1-222	ENST00000625672	LINC00114	Q6XXX2	140 aa		11.28	□□□□□ -0.6
NRXN1-222	ENST00000625672	DSCR8	Q96T75	97 aa		11.28	□□□□□ -0.6
NRXN1-222	ENST00000625672	INAFM2	P0DMQ5	153 aa		11.28	□□□□□ -0.6
NRXN1-222	ENST00000625672	TMEM243	Q9BU79	118 aa		11.28	□□□□□ -0.6
NRXN1-222	ENST00000625672	VSIR	Q9H7M9	311 aa		11.28	□□□□□ -0.6
NRXN1-222	ENST00000625672	GUSBP1	Q15486	140 aa		11.27	□□□□□ -0.6
NRXN1-222	ENST00000625672		Q9HAA7	133 aa		11.27	□□□□□ -0.6
NRXN1-222	ENST00000625672	CLPSL1	A2RUU4	121 aa		11.27	□□□□□ -0.6
NRXN1-222	ENST00000625672		E7EQL1	145 aa		11.27	□□□□□ -0.61
NRXN1-222	ENST00000625672	TCTEX1D4	Q5JR98	221 aa		11.27	□□□□□ -0.61
NRXN1-222	ENST00000625672	CHD3	Q12873	2000 aa	Known RBP	11.27	□□□□□ -0.61
NRXN1-222	ENST00000625672	RHOD	O00212	210 aa		11.27	□□□□□ -0.61
NRXN1-222	ENST00000625672	PRR30	Q53SZ7	412 aa	Predicted RBP	11.27	□□□□□ -0.61
NRXN1-222	ENST00000625672	ATP6V0E1	O15342	81 aa		11.26	□□□□□ -0.61
NRXN1-222	ENST00000625672	RPRML	Q8N4K4	120 aa		11.26	□□□□□ -0.61
NRXN1-222	ENST00000625672	WDR83OS	Q9Y284	106 aa		11.26	□□□□□ -0.61
NRXN1-222	ENST00000625672	IGHV1-69D	A0A0B4J2H0	117 aa		11.26	□□□□□ -0.61
NRXN1-222	ENST00000625672	IGHV1-69	P01742	117 aa		11.26	□□□□□ -0.61
NRXN1-222	ENST00000625672	DEFB105A	Q8NG35	78 aa		11.26	□□□□□ -0.61
NRXN1-222	ENST00000625672	IGHV3-38	A0A0C4DH36	116 aa		11.26	□□□□□ -0.61
NRXN1-222	ENST00000625672	MESP1	Q9BRJ9	268 aa		11.26	□□□□□ -0.61
NRXN1-222	ENST00000625672	NYNRIN	Q9P2P1	1898 aa	Known RBP	11.26	□□□□□ -0.61
NRXN1-222	ENST00000625672		A0A0A6YYD4	124 aa		11.26	□□□□□ -0.61
NRXN1-222	ENST00000625672	LRRC37A	A6NMS7	1700 aa		11.25	□□□□□ -0.61
NRXN1-222	ENST00000625672	ARMS2	P0C7Q2	107 aa		11.25	□□□□□ -0.61
NRXN1-222	ENST00000625672	NUP35	Q8NFH5	326 aa		11.25	□□□□□ -0.61
NRXN1-222	ENST00000625672	ZNRF2	Q8NHG8	242 aa		11.25	□□□□□ -0.61
NRXN1-222	ENST00000625672	CHAC1	Q9BUX1	264 aa		11.25	□□□□□ -0.61
NRXN1-222	ENST00000625672	RNF126	Q9BV68	326 aa		11.25	□□□□□ -0.61
NRXN1-222	ENST00000625672	GVINP1	Q7Z2Y8	2422 aa		11.25	□□□□□ -0.61
NRXN1-222	ENST00000625672		I3L3M4	83 aa		11.25	□□□□□ -0.61
NRXN1-222	ENST00000625672	GBF1	Q92538	1859 aa		11.25	□□□□□ -0.61
NRXN1-222	ENST00000625672	UBE2E1	P51965	193 aa		11.25	□□□□□ -0.61
NRXN1-222	ENST00000625672	NCOR1	O75376	2440 aa		11.25	□□□□□ -0.61
NRXN1-222	ENST00000625672	HAMP	P81172	84 aa		11.25	□□□□□ -0.61
NRXN1-222	ENST00000625672	THSD7A	Q9UPZ6	1657 aa		11.24	□□□□□ -0.61
NRXN1-222	ENST00000625672	WNK3	Q9BYP7	1800 aa		11.24	□□□□□ -0.61
NRXN1-222	ENST00000625672	ANK1	P16157	1881 aa		11.24	□□□□□ -0.61
NRXN1-222	ENST00000625672	TRAV12-2	A0A075B6T6	113 aa		11.24	□□□□□ -0.61
NRXN1-222	ENST00000625672	hDV102S1	A0JD36	115 aa		11.24	□□□□□ -0.61
NRXN1-222	ENST00000625672		C9JAW5	83 aa		11.24	□□□□□ -0.61
NRXN1-222	ENST00000625672	LYPD1	Q8N2G4	141 aa		11.24	□□□□□ -0.61
NRXN1-222	ENST00000625672	GSN-AS1	Q9NRJ2	163 aa		11.24	□□□□□ -0.61
NRXN1-222	ENST00000625672	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	11.24	□□□□□ -0.61
NRXN1-222	ENST00000625672	MED12	Q93074	2177 aa		11.24	□□□□□ -0.61
NRXN1-222	ENST00000625672	RNF222	A6NCQ9	220 aa		11.24	□□□□□ -0.61
NRXN1-222	ENST00000625672	AMN1	Q8IY45	258 aa		11.24	□□□□□ -0.61
NRXN1-222	ENST00000625672	RPL18A	Q02543	176 aa	Known RBP	11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms