RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 SLC35B3Q9H1N7 401 aa9.56□□□□□ -0.88
SNX1-214ENST00000625244 MED28Q9H204 178 aa9.56□□□□□ -0.88
SNX1-214ENST00000625244 U3KQE9 123 aa9.56□□□□□ -0.88
SNX1-214ENST00000625244 TRAV30A0A087WSZ9 112 aa9.55□□□□□ -0.88
SNX1-214ENST00000625244 TSC22D2O75157 780 aa9.55□□□□□ -0.88
SNX1-214ENST00000625244 PET100P0DJ07 73 aa9.55□□□□□ -0.88
SNX1-214ENST00000625244 GCSHP23434 173 aa9.55□□□□□ -0.88
SNX1-214ENST00000625244 EIF2B2P49770 351 aaKnown RBP9.55□□□□□ -0.88
SNX1-214ENST00000625244 FCN2Q15485 313 aa9.55□□□□□ -0.88
SNX1-214ENST00000625244 C16orf54Q6UWD8 224 aa9.55□□□□□ -0.88
SNX1-214ENST00000625244 OR4X1Q8NH49 305 aa9.55□□□□□ -0.88
SNX1-214ENST00000625244 NMES1Q9C002 83 aa9.55□□□□□ -0.88
SNX1-214ENST00000625244 SEPSECSQ9HD40 501 aaKnown RBP9.55□□□□□ -0.88
SNX1-214ENST00000625244 RCL1Q9Y2P8 373 aaKnown RBP9.55□□□□□ -0.88
SNX1-214ENST00000625244 LYRM9A8MSI8 78 aa9.54□□□□□ -0.88
SNX1-214ENST00000625244 K7EPK0 472 aa9.54□□□□□ -0.88
SNX1-214ENST00000625244 CLN5O75503 358 aa9.54□□□□□ -0.88
SNX1-214ENST00000625244 SIX6O95475 246 aa9.54□□□□□ -0.88
SNX1-214ENST00000625244 GPX4P36969 197 aaPredicted RBP9.54□□□□□ -0.88
SNX1-214ENST00000625244 CAV2P51636 162 aa9.54□□□□□ -0.88
SNX1-214ENST00000625244 RND2P52198 227 aa9.54□□□□□ -0.88
SNX1-214ENST00000625244 ESRGQ1W209 222 aa9.54□□□□□ -0.88
SNX1-214ENST00000625244 DEFB104AQ8WTQ1 72 aa9.54□□□□□ -0.88
SNX1-214ENST00000625244 ACY3Q96HD9 319 aa9.54□□□□□ -0.88
SNX1-214ENST00000625244 NARS2Q96I59 477 aaKnown RBP9.54□□□□□ -0.88
SNX1-214ENST00000625244 FNDC4Q9H6D8 234 aaPredicted RBP9.54□□□□□ -0.88
SNX1-214ENST00000625244 MRPL36Q9P0J6 103 aaKnown RBP9.54□□□□□ -0.88
SNX1-214ENST00000625244 A0A087WTM6 91 aa9.53□□□□□ -0.88
SNX1-214ENST00000625244 ATP5G1P05496 136 aa9.53□□□□□ -0.88
SNX1-214ENST00000625244 FABP1P07148 127 aa9.53□□□□□ -0.88
SNX1-214ENST00000625244 ATP5G3P48201 142 aa9.53□□□□□ -0.88
SNX1-214ENST00000625244 AP2S1P53680 142 aaPredicted RBP9.53□□□□□ -0.88
SNX1-214ENST00000625244 RAB32Q13637 225 aa9.53□□□□□ -0.88
SNX1-214ENST00000625244 LRRC37A5PQ49AS3 106 aa9.53□□□□□ -0.88
SNX1-214ENST00000625244 OR8G2PQ6IF36 304 aa9.53□□□□□ -0.88
SNX1-214ENST00000625244 OR10P1Q8NGE3 313 aa9.53□□□□□ -0.88
SNX1-214ENST00000625244 TMEM170AQ8WVE7 144 aa9.53□□□□□ -0.88
SNX1-214ENST00000625244 SAV1Q9H4B6 383 aaPredicted RBP9.53□□□□□ -0.88
SNX1-214ENST00000625244 NRN1Q9NPD7 142 aa9.53□□□□□ -0.88
SNX1-214ENST00000625244 TNXBP22105 4242 aa9.52□□□□□ -0.88
SNX1-214ENST00000625244 SMCO3A2RU48 225 aa9.52□□□□□ -0.89
SNX1-214ENST00000625244 ZFP92A6NM28 416 aa9.52□□□□□ -0.89
SNX1-214ENST00000625244 METTL15P1P0C7V9 234 aa9.52□□□□□ -0.89
SNX1-214ENST00000625244 OR10J1P30954 320 aa9.52□□□□□ -0.89
SNX1-214ENST00000625244 AKR1C1Q04828 323 aa9.52□□□□□ -0.89
SNX1-214ENST00000625244 MLANAQ16655 118 aa9.52□□□□□ -0.89
SNX1-214ENST00000625244 PRSS54Q6PEW0 395 aa9.52□□□□□ -0.89
SNX1-214ENST00000625244 STX12Q86Y82 276 aa9.52□□□□□ -0.89
SNX1-214ENST00000625244 OR4B1Q8NGF8 309 aa9.52□□□□□ -0.89
SNX1-214ENST00000625244 OR1S2Q8NGQ3 325 aa9.52□□□□□ -0.89
SNX1-214ENST00000625244 NPIPB3Q92617 1050 aa9.52□□□□□ -0.89
SNX1-214ENST00000625244 CLUHP3Q96NS8 147 aa9.52□□□□□ -0.89
SNX1-214ENST00000625244 MRPS16Q9Y3D3 137 aaKnown RBP9.52□□□□□ -0.89
SNX1-214ENST00000625244 TNFRSF18Q9Y5U5 241 aa9.52□□□□□ -0.89
SNX1-214ENST00000625244 ZNF705GA8MUZ8 300 aaPredicted RBP9.51□□□□□ -0.89
SNX1-214ENST00000625244 E5RGE8 158 aa9.51□□□□□ -0.89
SNX1-214ENST00000625244 PLA2G1BP04054 148 aaKnown RBP9.51□□□□□ -0.89
SNX1-214ENST00000625244 H2BFSP57053 126 aa9.51□□□□□ -0.89
SNX1-214ENST00000625244 RRAS2P62070 204 aaPredicted RBP9.51□□□□□ -0.89
SNX1-214ENST00000625244 PSG9Q00887 426 aa9.51□□□□□ -0.89
SNX1-214ENST00000625244 Q8WTZ3 238 aa9.51□□□□□ -0.89
SNX1-214ENST00000625244 PPP1R1CQ8WVI7 109 aa9.51□□□□□ -0.89
SNX1-214ENST00000625244 ASB13Q8WXK3 278 aa9.51□□□□□ -0.89
SNX1-214ENST00000625244 CBY3A6NI87 242 aa9.5□□□□□ -0.89
SNX1-214ENST00000625244 PAX9P55771 341 aa9.5□□□□□ -0.89
SNX1-214ENST00000625244 HBG1P69891 147 aa9.5□□□□□ -0.89
SNX1-214ENST00000625244 HBG2P69892 147 aa9.5□□□□□ -0.89
SNX1-214ENST00000625244 IL15RAQ13261 267 aa9.5□□□□□ -0.89
SNX1-214ENST00000625244 GAMTQ14353 236 aa9.5□□□□□ -0.89
SNX1-214ENST00000625244 TMEM14EPQ6UXP3 125 aa9.5□□□□□ -0.89
SNX1-214ENST00000625244 FOXI2Q6ZQN5 318 aa9.5□□□□□ -0.89
SNX1-214ENST00000625244 ACOT7LQ6ZUV0 252 aa9.5□□□□□ -0.89
SNX1-214ENST00000625244 LINC00052Q96N35 136 aa9.5□□□□□ -0.89
SNX1-214ENST00000625244 TMEM208Q9BTX3 173 aa9.5□□□□□ -0.89
SNX1-214ENST00000625244 TMEM70Q9BUB7 260 aa9.5□□□□□ -0.89
SNX1-214ENST00000625244 SLC25A31Q9H0C2 315 aa9.5□□□□□ -0.89
SNX1-214ENST00000625244 LYRM2Q9NU23 88 aaPredicted RBP9.5□□□□□ -0.89
SNX1-214ENST00000625244 PLAC8L1A1L4L8 177 aa9.49□□□□□ -0.89
SNX1-214ENST00000625244 IGKV1-17P01599 117 aa9.49□□□□□ -0.89
SNX1-214ENST00000625244 HNRNPCP07910 306 aaKnown RBP eCLIP9.49□□□□□ -0.89
SNX1-214ENST00000625244 IGLC1P0CG04 106 aa9.49□□□□□ -0.89
SNX1-214ENST00000625244 YPEL3P61236 119 aaPredicted RBP9.49□□□□□ -0.89
SNX1-214ENST00000625244 FGL1Q08830 312 aa9.49□□□□□ -0.89
SNX1-214ENST00000625244 TIGITQ495A1 244 aa9.49□□□□□ -0.89
SNX1-214ENST00000625244 THAP6Q8TBB0 222 aa9.49□□□□□ -0.89
SNX1-214ENST00000625244 GGACTQ9BVM4 153 aa9.49□□□□□ -0.89
SNX1-214ENST00000625244 TRAV26-1A0A087WT03 109 aa9.48□□□□□ -0.89
SNX1-214ENST00000625244 FAM24AA6NFZ4 105 aa9.48□□□□□ -0.89
SNX1-214ENST00000625244 F6UB75 175 aa9.48□□□□□ -0.89
SNX1-214ENST00000625244 RD3LP0DJH9 198 aa9.48□□□□□ -0.89
SNX1-214ENST00000625244 SULT1A1P50225 295 aa9.48□□□□□ -0.89
SNX1-214ENST00000625244 SIGLEC15Q6ZMC9 328 aa9.48□□□□□ -0.89
SNX1-214ENST00000625244 RXFP4Q8TDU9 374 aa9.48□□□□□ -0.89
SNX1-214ENST00000625244 GNPNAT1Q96EK6 184 aaPredicted RBP9.48□□□□□ -0.89
SNX1-214ENST00000625244 FAM30AQ9NZY2 134 aa9.48□□□□□ -0.89
SNX1-214ENST00000625244 PFDN2Q9UHV9 154 aa9.48□□□□□ -0.89
SNX1-214ENST00000625244 A0A0J9YY99 117 aa9.47□□□□□ -0.89
SNX1-214ENST00000625244 PRSS46E5RG02 174 aa9.47□□□□□ -0.89
SNX1-214ENST00000625244 FNDC10F2Z333 226 aa9.47□□□□□ -0.89
SNX1-214ENST00000625244 CST7O76096 145 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms