RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 VCX2Q9H322 139 aa13□□□□□ -0.33
GABRB3-215ENST00000622697 CYSLTR1Q9Y271 337 aa13□□□□□ -0.33
GABRB3-215ENST00000622697 TMEM213A2RRL7 107 aa13□□□□□ -0.33
GABRB3-215ENST00000622697 DLEU1O43261 78 aa13□□□□□ -0.33
GABRB3-215ENST00000622697 ZNF833PQ6ZTB9 187 aa13□□□□□ -0.33
GABRB3-215ENST00000622697 MRPL27Q9P0M9 148 aaKnown RBP13□□□□□ -0.33
GABRB3-215ENST00000622697 ZNF815PA8K554 130 aa12.99□□□□□ -0.33
GABRB3-215ENST00000622697 ZNF688P0C7X2 276 aa12.99□□□□□ -0.33
GABRB3-215ENST00000622697 SSBP2P81877 361 aaPredicted RBP12.99□□□□□ -0.33
GABRB3-215ENST00000622697 LAGE3Q14657 143 aa12.99□□□□□ -0.33
GABRB3-215ENST00000622697 TMEM249Q2WGJ8 235 aa12.99□□□□□ -0.33
GABRB3-215ENST00000622697 CDPF1Q6NVV7 123 aa12.99□□□□□ -0.33
GABRB3-215ENST00000622697 DTX1Q86Y01 620 aa12.99□□□□□ -0.33
GABRB3-215ENST00000622697 C18orf32Q8TCD1 76 aa12.99□□□□□ -0.33
GABRB3-215ENST00000622697 SHANK2-AS3Q9BTD1 123 aa12.99□□□□□ -0.33
GABRB3-215ENST00000622697 FAM215AQ9Y5M1 114 aa12.99□□□□□ -0.33
GABRB3-215ENST00000622697 IGLV1-44P01699 117 aa12.99□□□□□ -0.33
GABRB3-215ENST00000622697 GATA4P43694 442 aa12.99□□□□□ -0.33
GABRB3-215ENST00000622697 CREBBPQ92793 2442 aa12.99□□□□□ -0.33
GABRB3-215ENST00000622697 SAA4P35542 130 aa12.99□□□□□ -0.33
GABRB3-215ENST00000622697 RIPPLY3P57055 190 aa12.99□□□□□ -0.33
GABRB3-215ENST00000622697 V9GYV3 84 aa12.99□□□□□ -0.33
GABRB3-215ENST00000622697 LOXP28300 417 aaPredicted RBP12.99□□□□□ -0.33
GABRB3-215ENST00000622697 CFHR2P36980 270 aa12.99□□□□□ -0.33
GABRB3-215ENST00000622697 SLAQ13239 276 aa12.99□□□□□ -0.33
GABRB3-215ENST00000622697 MINOS1Q5TGZ0 78 aa12.99□□□□□ -0.33
GABRB3-215ENST00000622697 C11orf53Q8IXP5 236 aa12.99□□□□□ -0.33
GABRB3-215ENST00000622697 MINOS1-NBL1R4GNA1 71 aa12.99□□□□□ -0.33
GABRB3-215ENST00000622697 ORMDL2Q53FV1 153 aa12.98□□□□□ -0.33
GABRB3-215ENST00000622697 M0R1W7 72 aa12.98□□□□□ -0.33
GABRB3-215ENST00000622697 IGHV2-70P01814 119 aa12.98□□□□□ -0.33
GABRB3-215ENST00000622697 C14orf178Q8N769 122 aaPredicted RBP12.98□□□□□ -0.33
GABRB3-215ENST00000622697 C2orf88Q9BSF0 95 aa12.98□□□□□ -0.33
GABRB3-215ENST00000622697 FCN3O75636 299 aa12.98□□□□□ -0.33
GABRB3-215ENST00000622697 Q6ZWC4 215 aa12.98□□□□□ -0.33
GABRB3-215ENST00000622697 TRAV12-3A0A0B4J271 114 aa12.98□□□□□ -0.33
GABRB3-215ENST00000622697 OVOL1O14753 267 aa12.98□□□□□ -0.33
GABRB3-215ENST00000622697 LYPD6BQ8NI32 183 aa12.98□□□□□ -0.33
GABRB3-215ENST00000622697 PRSS22Q9GZN4 317 aa12.98□□□□□ -0.33
GABRB3-215ENST00000622697 MS4A6AQ9H2W1 248 aa12.98□□□□□ -0.33
GABRB3-215ENST00000622697 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.97□□□□□ -0.33
GABRB3-215ENST00000622697 A0A0U1RRA0 63 aa12.97□□□□□ -0.33
GABRB3-215ENST00000622697 WT1P19544 449 aaPredicted RBP12.97□□□□□ -0.33
GABRB3-215ENST00000622697 Q0VG73 95 aa12.97□□□□□ -0.33
GABRB3-215ENST00000622697 PLA2G2CQ5R387 149 aa12.97□□□□□ -0.33
GABRB3-215ENST00000622697 RNF138Q8WVD3 245 aa12.97□□□□□ -0.33
GABRB3-215ENST00000622697 RUSC1-AS1Q66K80 236 aa12.97□□□□□ -0.33
GABRB3-215ENST00000622697 TRGV2A0A075B6R0 118 aa12.97□□□□□ -0.33
GABRB3-215ENST00000622697 TRAV2A0A0B4J234 112 aa12.97□□□□□ -0.33
GABRB3-215ENST00000622697 STPG4Q8N801 248 aa12.97□□□□□ -0.33
GABRB3-215ENST00000622697 OR2K2Q8NGT1 345 aa12.97□□□□□ -0.33
GABRB3-215ENST00000622697 IGFBPL1Q8WX77 278 aa12.97□□□□□ -0.33
GABRB3-215ENST00000622697 TTC28Q96AY4 2481 aa12.97□□□□□ -0.33
GABRB3-215ENST00000622697 NDUFB8O95169 186 aa12.97□□□□□ -0.33
GABRB3-215ENST00000622697 Q8TCH9 128 aa12.97□□□□□ -0.33
GABRB3-215ENST00000622697 TMEM158Q8WZ71 300 aa12.97□□□□□ -0.33
GABRB3-215ENST00000622697 IGLV3-9A0A075B6K5 115 aa12.96□□□□□ -0.33
GABRB3-215ENST00000622697 TDGF1P3P51864 188 aa12.96□□□□□ -0.33
GABRB3-215ENST00000622697 Q8NFD4 153 aa12.96□□□□□ -0.33
GABRB3-215ENST00000622697 BCL6BQ8N143 479 aaPredicted RBP12.96□□□□□ -0.33
GABRB3-215ENST00000622697 PRTN3P24158 256 aa12.96□□□□□ -0.34
GABRB3-215ENST00000622697 HSD52Q0P140 79 aa12.96□□□□□ -0.34
GABRB3-215ENST00000622697 TMEM101Q96IK0 257 aa12.96□□□□□ -0.34
GABRB3-215ENST00000622697 SNHG12Q9BXW3 62 aa12.96□□□□□ -0.34
GABRB3-215ENST00000622697 PCNX2A6NKB5 2137 aa12.95□□□□□ -0.34
GABRB3-215ENST00000622697 MALRD1Q5VYJ5 2156 aa12.95□□□□□ -0.34
GABRB3-215ENST00000622697 G3V318 75 aa12.95□□□□□ -0.34
GABRB3-215ENST00000622697 SAMD5Q5TGI4 173 aa12.95□□□□□ -0.34
GABRB3-215ENST00000622697 TMEM8BA6NDV4 472 aa12.95□□□□□ -0.34
GABRB3-215ENST00000622697 IGHV4-39P01824 125 aa12.95□□□□□ -0.34
GABRB3-215ENST00000622697 TTC32Q5I0X7 151 aa12.95□□□□□ -0.34
GABRB3-215ENST00000622697 HOXA3O43365 443 aaPredicted RBP12.95□□□□□ -0.34
GABRB3-215ENST00000622697 LYPD1Q8N2G4 141 aa12.95□□□□□ -0.34
GABRB3-215ENST00000622697 K7EN84 100 aa12.94□□□□□ -0.34
GABRB3-215ENST00000622697 ATP6V0E1O15342 81 aa12.94□□□□□ -0.34
GABRB3-215ENST00000622697 PEMTQ9UBM1 199 aa12.94□□□□□ -0.34
GABRB3-215ENST00000622697 C2orf16Q68DN1 1984 aa12.94□□□□□ -0.34
GABRB3-215ENST00000622697 OOSP1A8MZH6 123 aa12.94□□□□□ -0.34
GABRB3-215ENST00000622697 K7EM74 188 aa12.94□□□□□ -0.34
GABRB3-215ENST00000622697 STHQ8IWL8 128 aa12.94□□□□□ -0.34
GABRB3-215ENST00000622697 CD28P10747 220 aa12.94□□□□□ -0.34
GABRB3-215ENST00000622697 CEACAM8P31997 349 aaPredicted RBP12.94□□□□□ -0.34
GABRB3-215ENST00000622697 ZGRF1Q86YA3 2104 aa12.94□□□□□ -0.34
GABRB3-215ENST00000622697 ZNF479Q96JC4 524 aa12.94□□□□□ -0.34
GABRB3-215ENST00000622697 TRBV7-1A0A0A6YYK4 115 aa12.93□□□□□ -0.34
GABRB3-215ENST00000622697 SEC11AP67812 179 aa12.93□□□□□ -0.34
GABRB3-215ENST00000622697 MED13Q9UHV7 2174 aa12.93□□□□□ -0.34
GABRB3-215ENST00000622697 ZNF562Q6V9R5 426 aa12.93□□□□□ -0.34
GABRB3-215ENST00000622697 TEX29Q8N6K0 151 aa12.93□□□□□ -0.34
GABRB3-215ENST00000622697 BDP1A6H8Y1 2624 aa12.93□□□□□ -0.34
GABRB3-215ENST00000622697 A0A087WWL8 130 aa12.93□□□□□ -0.34
GABRB3-215ENST00000622697 NPC2P61916 151 aa12.93□□□□□ -0.34
GABRB3-215ENST00000622697 YAE1D1Q9NRH1 226 aa12.93□□□□□ -0.34
GABRB3-215ENST00000622697 ZC2HC1BQ5TFG8 222 aa12.92□□□□□ -0.34
GABRB3-215ENST00000622697 TEX36Q5VZQ5 186 aa12.92□□□□□ -0.34
GABRB3-215ENST00000622697 RCHY1Q96PM5 261 aa12.92□□□□□ -0.34
GABRB3-215ENST00000622697 FREM1Q5H8C1 2179 aa12.92□□□□□ -0.34
GABRB3-215ENST00000622697 TRBV19A0A075B6N1 114 aa12.92□□□□□ -0.34
GABRB3-215ENST00000622697 DUSP14O95147 198 aaKnown RBP12.92□□□□□ -0.34
GABRB3-215ENST00000622697 DNAL4O96015 105 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms