RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 IGHV1OR21-1A0A087WYE8 117 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 A0A1B0GUT8 65 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 TINCRA0A1B0GVN0 87 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 NBR2O15453 112 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 NXPH1P58417 271 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 HES3Q5TGS1 186 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 LYRM7Q5U5X0 104 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 GTSCR1Q86UQ5 136 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 KIR2DL5BQ8NHK3 375 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 AJUBAQ96IF1 538 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 A0A096LNJ9 63 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 TRAV8-2A0A0B4J237 113 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 LINC00473A8K010 186 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 PRSS1P07477 247 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 FKBP2P26885 142 aaKnown RBP6.35□□□□□ -1.39
VPS11-209ENST00000622309 ZNF415Q09FC8 603 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 SFTA2Q6UW10 78 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 FAM19A5Q7Z5A7 132 aaPredicted RBP6.35□□□□□ -1.39
VPS11-209ENST00000622309 RBMXL3Q8N7X1 1067 aaKnown RBP6.35□□□□□ -1.39
VPS11-209ENST00000622309 RPEQ96AT9 228 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 COQ2Q96H96 371 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 RASL11BQ9BPW5 248 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 MRPL32Q9BYC8 188 aaKnown RBP6.35□□□□□ -1.39
VPS11-209ENST00000622309 C7orf69Q9H7B7 122 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 DCHS1Q96JQ0 3298 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 FER1L5A0AVI2 2057 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 TRAV4A0A0B4J268 109 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 LILRA5A6NI73 299 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 ZNHIT1O43257 154 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 NDUFS7O75251 213 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 NGFP01138 241 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 PYYP10082 97 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 HRCT1Q6UXD1 115 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 VKORC1L1Q8N0U8 176 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 PIFOQ8TCI5 191 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 PRSS22Q9GZN4 317 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 TANC2Q9HCD6 1990 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 BAHCC1Q9P281 2608 aa6.35□□□□□ -1.39
VPS11-209ENST00000622309 WISP2O76076 250 aa6.34□□□□□ -1.39
VPS11-209ENST00000622309 OR2H2O95918 312 aa6.34□□□□□ -1.39
VPS11-209ENST00000622309 ASIPP42127 132 aa6.34□□□□□ -1.39
VPS11-209ENST00000622309 LINC00322Q6ZN03 302 aaPredicted RBP6.34□□□□□ -1.39
VPS11-209ENST00000622309 MOB3BQ86TA1 216 aa6.34□□□□□ -1.39
VPS11-209ENST00000622309 TIMD4Q96H15 378 aa6.34□□□□□ -1.39
VPS11-209ENST00000622309 EPDR1Q9UM22 224 aa6.34□□□□□ -1.39
VPS11-209ENST00000622309 KNTC1P50748 2209 aa6.34□□□□□ -1.39
VPS11-209ENST00000622309 GPR179Q6PRD1 2367 aa6.34□□□□□ -1.39
VPS11-209ENST00000622309 DOCK7Q96N67 2140 aa6.34□□□□□ -1.39
VPS11-209ENST00000622309 MOSP00540 346 aa6.34□□□□□ -1.39
VPS11-209ENST00000622309 IGKCP01834 107 aa6.34□□□□□ -1.39
VPS11-209ENST00000622309 DUTP33316 252 aaKnown RBP6.34□□□□□ -1.39
VPS11-209ENST00000622309 FAM53AQ6NSI3 398 aaPredicted RBP6.34□□□□□ -1.39
VPS11-209ENST00000622309 CIARTQ8N365 385 aaPredicted RBP6.34□□□□□ -1.39
VPS11-209ENST00000622309 RND1Q92730 232 aa6.34□□□□□ -1.39
VPS11-209ENST00000622309 ZNF492Q9P255 531 aa6.34□□□□□ -1.39
VPS11-209ENST00000622309 FZR1Q9UM11 496 aa6.34□□□□□ -1.39
VPS11-209ENST00000622309 CACNA1GO43497 2377 aa6.34□□□□□ -1.4
VPS11-209ENST00000622309 A8MZ25 164 aa6.34□□□□□ -1.4
VPS11-209ENST00000622309 COX7A2P2O60397 106 aa6.34□□□□□ -1.4
VPS11-209ENST00000622309 SP1P08047 785 aa6.34□□□□□ -1.4
VPS11-209ENST00000622309 CXCL12P48061 93 aa6.34□□□□□ -1.4
VPS11-209ENST00000622309 EIF4EBP1Q13541 118 aaPredicted RBP6.34□□□□□ -1.4
VPS11-209ENST00000622309 ZC2HC1BQ5TFG8 222 aa6.34□□□□□ -1.4
VPS11-209ENST00000622309 Q6P435 159 aa6.34□□□□□ -1.4
VPS11-209ENST00000622309 GUSBP11Q6P575 273 aa6.34□□□□□ -1.4
VPS11-209ENST00000622309 SLC25A48Q6ZT89 311 aaKnown RBP6.34□□□□□ -1.4
VPS11-209ENST00000622309 OR10J6PQ8NGY7 276 aa6.34□□□□□ -1.4
VPS11-209ENST00000622309 DNAJC30Q96LL9 226 aa6.34□□□□□ -1.4
VPS11-209ENST00000622309 FOXB1Q99853 325 aa6.34□□□□□ -1.4
VPS11-209ENST00000622309 PGPA6NDG6 321 aa6.33□□□□□ -1.4
VPS11-209ENST00000622309 C10orf142B7Z368 130 aa6.33□□□□□ -1.4
VPS11-209ENST00000622309 PCOLCEQ15113 449 aa6.33□□□□□ -1.4
VPS11-209ENST00000622309 C4orf26Q17RF5 130 aa6.33□□□□□ -1.4
VPS11-209ENST00000622309 PDPNQ86YL7 162 aa6.33□□□□□ -1.4
VPS11-209ENST00000622309 PLXDC1Q8IUK5 500 aa6.33□□□□□ -1.4
VPS11-209ENST00000622309 SLC25A2Q9BXI2 301 aa6.33□□□□□ -1.4
VPS11-209ENST00000622309 PRDM14Q9GZV8 571 aa6.33□□□□□ -1.4
VPS11-209ENST00000622309 ZMAT4Q9H898 229 aa6.33□□□□□ -1.4
VPS11-209ENST00000622309 ASPMQ8IZT6 3477 aa6.33□□□□□ -1.4
VPS11-209ENST00000622309 TRAV3A0A0B4J244 114 aa6.33□□□□□ -1.4
VPS11-209ENST00000622309 SHISA9B4DS77 424 aa6.33□□□□□ -1.4
VPS11-209ENST00000622309 LPAL2Q16609 132 aa6.33□□□□□ -1.4
VPS11-209ENST00000622309 Q6Q795 121 aa6.33□□□□□ -1.4
VPS11-209ENST00000622309 TMEM158Q8WZ71 300 aa6.33□□□□□ -1.4
VPS11-209ENST00000622309 IGHV3-43A0A0B4J1X8 118 aa6.32□□□□□ -1.4
VPS11-209ENST00000622309 TRGV8A0A0C4DH27 118 aa6.32□□□□□ -1.4
VPS11-209ENST00000622309 TMEM30CPA0ZSE6 113 aa6.32□□□□□ -1.4
VPS11-209ENST00000622309 DEFB108AA8MXU0 73 aa6.32□□□□□ -1.4
VPS11-209ENST00000622309 C12orf77C9JDV5 145 aa6.32□□□□□ -1.4
VPS11-209ENST00000622309 D6R8Y8 96 aa6.32□□□□□ -1.4
VPS11-209ENST00000622309 ARMS2P0C7Q2 107 aa6.32□□□□□ -1.4
VPS11-209ENST00000622309 SCGB1C2P0DMR2 95 aa6.32□□□□□ -1.4
VPS11-209ENST00000622309 IGHV3-43DP0DP04 118 aa6.32□□□□□ -1.4
VPS11-209ENST00000622309 MYOD1P15172 320 aa6.32□□□□□ -1.4
VPS11-209ENST00000622309 MAGEA5P43359 124 aa6.32□□□□□ -1.4
VPS11-209ENST00000622309 PLGLB1Q02325 96 aa6.32□□□□□ -1.4
VPS11-209ENST00000622309 KRTAP27-1Q3LI81 207 aa6.32□□□□□ -1.4
VPS11-209ENST00000622309 PRR30Q53SZ7 412 aaPredicted RBP6.32□□□□□ -1.4
VPS11-209ENST00000622309 FAM167A-AS1Q96KT0 104 aa6.32□□□□□ -1.4
VPS11-209ENST00000622309 SPRY4Q9C004 299 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 8318.9 ms