RNA–Protein interactions for RNA: ENST00000622176.4

SLC6A6-209, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best)

Gene SLC6A6, Length 1,116 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-209ENST00000622176 LCN15Q6UWW0 184 aa12.96□□□□□ -0.33
SLC6A6-209ENST00000622176 C16orf92Q96LL3 132 aa12.96□□□□□ -0.33
SLC6A6-209ENST00000622176 OR51M1Q9H341 326 aa12.96□□□□□ -0.33
SLC6A6-209ENST00000622176 PYYP10082 97 aa12.95□□□□□ -0.34
SLC6A6-209ENST00000622176 C4BPBP20851 252 aa12.95□□□□□ -0.34
SLC6A6-209ENST00000622176 KHDC3LQ587J8 217 aa12.95□□□□□ -0.34
SLC6A6-209ENST00000622176 PSMG4Q5JS54 123 aa12.95□□□□□ -0.34
SLC6A6-209ENST00000622176 AKR1C8PQ5T2L2 129 aa12.95□□□□□ -0.34
SLC6A6-209ENST00000622176 SLC51BQ86UW2 128 aa12.95□□□□□ -0.34
SLC6A6-209ENST00000622176 APRG1Q8IVJ8 170 aa12.95□□□□□ -0.34
SLC6A6-209ENST00000622176 SAT2Q96F10 170 aaPredicted RBP12.95□□□□□ -0.34
SLC6A6-209ENST00000622176 ZNF503Q96F45 646 aa12.95□□□□□ -0.34
SLC6A6-209ENST00000622176 CITED4Q96RK1 184 aa12.95□□□□□ -0.34
SLC6A6-209ENST00000622176 PAXXQ9BUH6 204 aa12.95□□□□□ -0.34
SLC6A6-209ENST00000622176 TUBA4BQ9H853 241 aa12.95□□□□□ -0.34
SLC6A6-209ENST00000622176 SRD5A3Q9H8P0 318 aa12.95□□□□□ -0.34
SLC6A6-209ENST00000622176 ZNF586Q9NXT0 402 aa12.95□□□□□ -0.34
SLC6A6-209ENST00000622176 ZNF253O75346 499 aa12.94□□□□□ -0.34
SLC6A6-209ENST00000622176 SNRPCP09234 159 aaKnown RBP12.94□□□□□ -0.34
SLC6A6-209ENST00000622176 CDC34P49427 236 aaPredicted RBP12.94□□□□□ -0.34
SLC6A6-209ENST00000622176 NKX2-5P52952 324 aaPredicted RBP12.94□□□□□ -0.34
SLC6A6-209ENST00000622176 RNF141Q8WVD5 230 aa12.94□□□□□ -0.34
SLC6A6-209ENST00000622176 RAB24Q969Q5 203 aa12.94□□□□□ -0.34
SLC6A6-209ENST00000622176 FXYD5Q96DB9 178 aa12.94□□□□□ -0.34
SLC6A6-209ENST00000622176 LINC00052Q96N35 136 aa12.94□□□□□ -0.34
SLC6A6-209ENST00000622176 SLC50A1Q9BRV3 221 aa12.94□□□□□ -0.34
SLC6A6-209ENST00000622176 ACTR3CQ9C0K3 210 aaPredicted RBP12.94□□□□□ -0.34
SLC6A6-209ENST00000622176 ZNF331Q9NQX6 463 aaPredicted RBP12.94□□□□□ -0.34
SLC6A6-209ENST00000622176 TRBV19A0A075B6N1 114 aa12.93□□□□□ -0.34
SLC6A6-209ENST00000622176 H3BTX0 84 aa12.93□□□□□ -0.34
SLC6A6-209ENST00000622176 OR7C2O60412 319 aa12.93□□□□□ -0.34
SLC6A6-209ENST00000622176 EIF3GO75821 320 aaKnown RBP eCLIP12.93□□□□□ -0.34
SLC6A6-209ENST00000622176 FRMD6-AS1P0C7T7 363 aa12.93□□□□□ -0.34
SLC6A6-209ENST00000622176 ZNF124Q15973 351 aa12.93□□□□□ -0.34
SLC6A6-209ENST00000622176 LINC00322Q6ZN03 302 aaPredicted RBP12.93□□□□□ -0.34
SLC6A6-209ENST00000622176 PQLC2Q6ZP29 291 aa12.93□□□□□ -0.34
SLC6A6-209ENST00000622176 LRRC20Q8TCA0 184 aa12.93□□□□□ -0.34
SLC6A6-209ENST00000622176 C20orf173Q96LM9 149 aa12.93□□□□□ -0.34
SLC6A6-209ENST00000622176 PLA2G2EQ9NZK7 142 aa12.93□□□□□ -0.34
SLC6A6-209ENST00000622176 RBMY1BA6NDE4 496 aaKnown RBP12.92□□□□□ -0.34
SLC6A6-209ENST00000622176 RBMY1EA6NEQ0 496 aaKnown RBP12.92□□□□□ -0.34
SLC6A6-209ENST00000622176 UMAD1C9J7I0 102 aa12.92□□□□□ -0.34
SLC6A6-209ENST00000622176 SLC17A3O00476 420 aa12.92□□□□□ -0.34
SLC6A6-209ENST00000622176 NBEAP1P0C6P0 100 aa12.92□□□□□ -0.34
SLC6A6-209ENST00000622176 RBMY1DP0C7P1 496 aaKnown RBP12.92□□□□□ -0.34
SLC6A6-209ENST00000622176 STAG3L2P0CL84 134 aa12.92□□□□□ -0.34
SLC6A6-209ENST00000622176 STAG3L3P0CL85 134 aa12.92□□□□□ -0.34
SLC6A6-209ENST00000622176 PDE6HQ13956 83 aa12.92□□□□□ -0.34
SLC6A6-209ENST00000622176 IGFL4Q6B9Z1 124 aa12.92□□□□□ -0.34
SLC6A6-209ENST00000622176 TMED6Q8WW62 240 aa12.92□□□□□ -0.34
SLC6A6-209ENST00000622176 HMGB3O15347 200 aaKnown RBP12.91□□□□□ -0.34
SLC6A6-209ENST00000622176 NDUFB4O95168 129 aa12.91□□□□□ -0.34
SLC6A6-209ENST00000622176 OR10J4P0C629 311 aa12.91□□□□□ -0.34
SLC6A6-209ENST00000622176 UBE2L3P68036 154 aaKnown RBP12.91□□□□□ -0.34
SLC6A6-209ENST00000622176 ZNF726P1Q15940 193 aa12.91□□□□□ -0.34
SLC6A6-209ENST00000622176 EIF5AL1Q6IS14 154 aaKnown RBP12.91□□□□□ -0.34
SLC6A6-209ENST00000622176 RNF182Q8N6D2 247 aa12.91□□□□□ -0.34
SLC6A6-209ENST00000622176 CLEC5AQ9NY25 188 aa12.91□□□□□ -0.34
SLC6A6-209ENST00000622176 DNAH9Q9NYC9 4486 aa12.9□□□□□ -0.34
SLC6A6-209ENST00000622176 CTXND1A0A1B0GTU2 59 aa12.9□□□□□ -0.34
SLC6A6-209ENST00000622176 KNCNA6PVL3 124 aa12.9□□□□□ -0.34
SLC6A6-209ENST00000622176 ARL14EPLP0DKL9 152 aa12.9□□□□□ -0.34
SLC6A6-209ENST00000622176 PSG3Q16557 428 aa12.9□□□□□ -0.34
SLC6A6-209ENST00000622176 SSX7Q7RTT5 188 aa12.9□□□□□ -0.34
SLC6A6-209ENST00000622176 BLNKQ8WV28 456 aa12.9□□□□□ -0.34
SLC6A6-209ENST00000622176 LOC102724200A0A096LPH7 203 aaPredicted RBP12.89□□□□□ -0.35
SLC6A6-209ENST00000622176 HLA-DMBP28068 263 aa12.89□□□□□ -0.35
SLC6A6-209ENST00000622176 PSG9Q00887 426 aa12.89□□□□□ -0.35
SLC6A6-209ENST00000622176 ACTL10Q5JWF8 245 aa12.89□□□□□ -0.35
SLC6A6-209ENST00000622176 DPPA3Q6W0C5 159 aa12.89□□□□□ -0.35
SLC6A6-209ENST00000622176 FOXI2Q6ZQN5 318 aa12.89□□□□□ -0.35
SLC6A6-209ENST00000622176 B9D2Q9BPU9 175 aa12.89□□□□□ -0.35
SLC6A6-209ENST00000622176 SAV1Q9H4B6 383 aaPredicted RBP12.89□□□□□ -0.35
SLC6A6-209ENST00000622176 BOLA1Q9Y3E2 137 aa12.89□□□□□ -0.35
SLC6A6-209ENST00000622176 COL7A1Q02388 2944 aa12.89□□□□□ -0.35
SLC6A6-209ENST00000622176 CXorf1O96002 111 aa12.88□□□□□ -0.35
SLC6A6-209ENST00000622176 HLA-DRB4P13762 266 aa12.88□□□□□ -0.35
SLC6A6-209ENST00000622176 GCHFRP30047 84 aa12.88□□□□□ -0.35
SLC6A6-209ENST00000622176 FHITP49789 147 aa12.88□□□□□ -0.35
SLC6A6-209ENST00000622176 DEFB1P60022 68 aa12.88□□□□□ -0.35
SLC6A6-209ENST00000622176 ZNF738Q8NE65 137 aa12.88□□□□□ -0.35
SLC6A6-209ENST00000622176 SUN5Q8TC36 379 aa12.88□□□□□ -0.35
SLC6A6-209ENST00000622176 HLA-DRB4X5D2U9 266 aa12.88□□□□□ -0.35
SLC6A6-209ENST00000622176 AGRNO00468 2067 aa12.88□□□□□ -0.35
SLC6A6-209ENST00000622176 H3BMM0 161 aa12.87□□□□□ -0.35
SLC6A6-209ENST00000622176 RAB5CP51148 216 aa12.87□□□□□ -0.35
SLC6A6-209ENST00000622176 GDF5OSQ5U4N7 250 aa12.87□□□□□ -0.35
SLC6A6-209ENST00000622176 TRPT1Q86TN4 253 aaKnown RBP12.87□□□□□ -0.35
SLC6A6-209ENST00000622176 STHQ8IWL8 128 aa12.87□□□□□ -0.35
SLC6A6-209ENST00000622176 LYPD1Q8N2G4 141 aa12.87□□□□□ -0.35
SLC6A6-209ENST00000622176 MRPL53Q96EL3 112 aaKnown RBP12.87□□□□□ -0.35
SLC6A6-209ENST00000622176 PHYHIPLQ96FC7 376 aa12.87□□□□□ -0.35
SLC6A6-209ENST00000622176 PRELID1Q9Y255 219 aa12.87□□□□□ -0.35
SLC6A6-209ENST00000622176 KIR2DL5BA0A0G2JN68 375 aa12.86□□□□□ -0.35
SLC6A6-209ENST00000622176 KIR2DL5BA0A0G2JPC4 375 aa12.86□□□□□ -0.35
SLC6A6-209ENST00000622176 A0A0J9YX75 114 aa12.86□□□□□ -0.35
SLC6A6-209ENST00000622176 F6UB75 175 aa12.86□□□□□ -0.35
SLC6A6-209ENST00000622176 BOLA2-SMG1P6H3BVE0 249 aa12.86□□□□□ -0.35
SLC6A6-209ENST00000622176 RPL35AP18077 110 aaKnown RBP12.86□□□□□ -0.35
SLC6A6-209ENST00000622176 HAGHQ16775 308 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms