RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 ALKBH7Q9BT30 221 aaPredicted RBP13.74□□□□□ -0.21
FAM3A-222ENST00000621967 WNT10AQ9GZT5 417 aa13.74□□□□□ -0.21
FAM3A-222ENST00000621967 IGKV1-17P01599 117 aa13.74□□□□□ -0.21
FAM3A-222ENST00000621967 CTRLP40313 264 aa13.74□□□□□ -0.21
FAM3A-222ENST00000621967 MMDQ15546 238 aa13.74□□□□□ -0.21
FAM3A-222ENST00000621967 CIARTQ8N365 385 aaPredicted RBP13.74□□□□□ -0.21
FAM3A-222ENST00000621967 SOX21Q9Y651 276 aaPredicted RBP13.74□□□□□ -0.21
FAM3A-222ENST00000621967 OTOGQ6ZRI0 2925 aa13.73□□□□□ -0.21
FAM3A-222ENST00000621967 A8MWL6 223 aa13.73□□□□□ -0.21
FAM3A-222ENST00000621967 K7EIM0 57 aa13.73□□□□□ -0.21
FAM3A-222ENST00000621967 TIMM23O14925 209 aa13.73□□□□□ -0.21
FAM3A-222ENST00000621967 C3orf79P0CE67 100 aa13.73□□□□□ -0.21
FAM3A-222ENST00000621967 ZNF705AQ6ZN79 300 aaPredicted RBP13.73□□□□□ -0.21
FAM3A-222ENST00000621967 Q86TA4 180 aa13.73□□□□□ -0.21
FAM3A-222ENST00000621967 OR11H6Q8NGC7 330 aa13.73□□□□□ -0.21
FAM3A-222ENST00000621967 RASL11BQ9BPW5 248 aa13.73□□□□□ -0.21
FAM3A-222ENST00000621967 GFRA4Q9GZZ7 299 aa13.73□□□□□ -0.21
FAM3A-222ENST00000621967 TEX15Q9BXT5 2789 aa13.72□□□□□ -0.21
FAM3A-222ENST00000621967 NPIPB6E9PJ23 425 aa13.72□□□□□ -0.21
FAM3A-222ENST00000621967 H3BTX0 84 aa13.72□□□□□ -0.21
FAM3A-222ENST00000621967 M0QZK8 103 aa13.72□□□□□ -0.21
FAM3A-222ENST00000621967 IGHV4-31P0DP07 118 aa13.72□□□□□ -0.21
FAM3A-222ENST00000621967 PLGLAQ15195 96 aa13.72□□□□□ -0.21
FAM3A-222ENST00000621967 TCF24Q7RTU0 167 aa13.72□□□□□ -0.21
FAM3A-222ENST00000621967 FAM19A2Q8N3H0 131 aa13.72□□□□□ -0.21
FAM3A-222ENST00000621967 CFHR4Q92496 578 aa13.72□□□□□ -0.21
FAM3A-222ENST00000621967 WNK2Q9Y3S1 2297 aa13.72□□□□□ -0.21
FAM3A-222ENST00000621967 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.72□□□□□ -0.214e-6■■□□□ 13.3
FAM3A-222ENST00000621967 TRBV6-1A0A0K0K1D8 114 aa13.72□□□□□ -0.21
FAM3A-222ENST00000621967 P01737 135 aa13.72□□□□□ -0.21
FAM3A-222ENST00000621967 ARF6P62330 175 aa13.72□□□□□ -0.21
FAM3A-222ENST00000621967 HBBP68871 147 aa13.72□□□□□ -0.21
FAM3A-222ENST00000621967 GTSF1Q8WW33 167 aa13.72□□□□□ -0.21
FAM3A-222ENST00000621967 SSBP4Q9BWG4 385 aaPredicted RBP13.72□□□□□ -0.21
FAM3A-222ENST00000621967 HIF1ANQ9NWT6 349 aa13.72□□□□□ -0.21
FAM3A-222ENST00000621967 FAM231BA6NCW3 169 aa13.71□□□□□ -0.21
FAM3A-222ENST00000621967 NDUFA3O95167 84 aa13.71□□□□□ -0.21
FAM3A-222ENST00000621967 TGFAP01135 160 aa13.71□□□□□ -0.21
FAM3A-222ENST00000621967 IGLV2-11P01706 119 aa13.71□□□□□ -0.21
FAM3A-222ENST00000621967 HTR1DP28221 377 aa13.71□□□□□ -0.21
FAM3A-222ENST00000621967 CAMPP49913 170 aa13.71□□□□□ -0.21
FAM3A-222ENST00000621967 NPBQ8NG41 125 aa13.71□□□□□ -0.21
FAM3A-222ENST00000621967 DPM3Q9P2X0 92 aa13.71□□□□□ -0.21
FAM3A-222ENST00000621967 M0R1W7 72 aa13.7□□□□□ -0.22
FAM3A-222ENST00000621967 NBR2O15453 112 aa13.7□□□□□ -0.22
FAM3A-222ENST00000621967 CYB5R2Q6BCY4 276 aa13.7□□□□□ -0.22
FAM3A-222ENST00000621967 C16orf54Q6UWD8 224 aa13.7□□□□□ -0.22
FAM3A-222ENST00000621967 KIR3DL3Q8N743 410 aa13.7□□□□□ -0.22
FAM3A-222ENST00000621967 SHANK2-AS3Q9BTD1 123 aa13.7□□□□□ -0.22
FAM3A-222ENST00000621967 H3BRN7 92 aa13.7□□□□□ -0.22
FAM3A-222ENST00000621967 TCAPO15273 167 aa13.7□□□□□ -0.22
FAM3A-222ENST00000621967 CNIH1O95406 144 aa13.7□□□□□ -0.22
FAM3A-222ENST00000621967 ZANQ9Y493 2812 aa13.7□□□□□ -0.22
FAM3A-222ENST00000621967 ODF3BA8MYP8 253 aa13.69□□□□□ -0.22
FAM3A-222ENST00000621967 NTF3P20783 257 aa13.69□□□□□ -0.22
FAM3A-222ENST00000621967 GATA3P23771 443 aa13.69□□□□□ -0.22
FAM3A-222ENST00000621967 RBPMS2Q6ZRY4 209 aaKnown RBP13.69□□□□□ -0.22
FAM3A-222ENST00000621967 BORCS7Q96B45 105 aa13.69□□□□□ -0.22
FAM3A-222ENST00000621967 CELSR1Q9NYQ6 3014 aa13.69□□□□□ -0.22
FAM3A-222ENST00000621967 HSBP1O75506 76 aa13.68□□□□□ -0.22
FAM3A-222ENST00000621967 IGLC2P0DOY2 106 aa13.68□□□□□ -0.22
FAM3A-222ENST00000621967 EXOC3-AS1Q8N2X6 119 aa13.68□□□□□ -0.22
FAM3A-222ENST00000621967 RNF24Q9Y225 148 aa13.68□□□□□ -0.22
FAM3A-222ENST00000621967 TRBV19A0A075B6N1 114 aa13.68□□□□□ -0.22
FAM3A-222ENST00000621967 TRAV8-1A0A0A6YYK1 113 aa13.68□□□□□ -0.22
FAM3A-222ENST00000621967 TOX4O94842 621 aa13.68□□□□□ -0.22
FAM3A-222ENST00000621967 CEACAM3P40198 252 aa13.68□□□□□ -0.22
FAM3A-222ENST00000621967 SPATA45Q537H7 98 aa13.68□□□□□ -0.22
FAM3A-222ENST00000621967 BPIFA4PQ86YQ2 179 aa13.68□□□□□ -0.22
FAM3A-222ENST00000621967 ZNF491Q8N8L2 437 aa13.68□□□□□ -0.22
FAM3A-222ENST00000621967 OR2D3Q8NGH3 330 aa13.68□□□□□ -0.22
FAM3A-222ENST00000621967 DAZAP1Q96EP5 407 aaKnown RBP13.68□□□□□ -0.22
FAM3A-222ENST00000621967 URB1-AS1Q96HZ7 61 aa13.68□□□□□ -0.22
FAM3A-222ENST00000621967 SVEP1Q4LDE5 3571 aa13.67□□□□□ -0.22
FAM3A-222ENST00000621967 CYSRT1A8MQ03 144 aa13.67□□□□□ -0.22
FAM3A-222ENST00000621967 MRPS12O15235 138 aaKnown RBP13.67□□□□□ -0.22
FAM3A-222ENST00000621967 C1orf122Q6ZSJ8 110 aa13.67□□□□□ -0.22
FAM3A-222ENST00000621967 GOLT1AQ6ZVE7 132 aa13.67□□□□□ -0.22
FAM3A-222ENST00000621967 LYPD1Q8N2G4 141 aa13.67□□□□□ -0.22
FAM3A-222ENST00000621967 WI2-2373I1.2A0A1W2PRP0 233 aa13.66□□□□□ -0.22
FAM3A-222ENST00000621967 FAM181BA6NEQ2 426 aa13.66□□□□□ -0.22
FAM3A-222ENST00000621967 PAX8Q06710 450 aa13.66□□□□□ -0.22
FAM3A-222ENST00000621967 FAM162BQ5T6X4 162 aa13.66□□□□□ -0.22
FAM3A-222ENST00000621967 VMO1Q7Z5L0 202 aa13.66□□□□□ -0.22
FAM3A-222ENST00000621967 TMEM75Q8N9X5 138 aa13.66□□□□□ -0.22
FAM3A-222ENST00000621967 RNF125Q96EQ8 232 aa13.66□□□□□ -0.22
FAM3A-222ENST00000621967 PGLYRP4Q96LB8 373 aa13.66□□□□□ -0.22
FAM3A-222ENST00000621967 SIRPDQ9H106 197 aa13.66□□□□□ -0.22
FAM3A-222ENST00000621967 HILPDAQ9Y5L2 63 aa13.66□□□□□ -0.22
FAM3A-222ENST00000621967 ZNF785A8K8V0 405 aa13.66□□□□□ -0.22
FAM3A-222ENST00000621967 APOHP02749 345 aaPredicted RBP13.66□□□□□ -0.22
FAM3A-222ENST00000621967 PRTN3P24158 256 aa13.66□□□□□ -0.22
FAM3A-222ENST00000621967 FOXA3P55318 350 aaPredicted RBP13.66□□□□□ -0.22
FAM3A-222ENST00000621967 SIGLEC15Q6ZMC9 328 aa13.66□□□□□ -0.22
FAM3A-222ENST00000621967 OR4F17Q8NGA8 305 aa13.66□□□□□ -0.22
FAM3A-222ENST00000621967 ZNF48Q96MX3 618 aaPredicted RBP13.66□□□□□ -0.22
FAM3A-222ENST00000621967 ACANP16112 2415 aa13.65□□□□□ -0.22
FAM3A-222ENST00000621967 J3QLI3 93 aa13.65□□□□□ -0.22
FAM3A-222ENST00000621967 M0R2Z0 102 aa13.65□□□□□ -0.22
FAM3A-222ENST00000621967 KLRD1Q13241 179 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms