RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 TXNDC17Q9BRA2 123 aa8.1□□□□□ -1.11
CPNE3-212ENST00000621783 SCO2A0A1W2PP80 73 aa8.09□□□□□ -1.11
CPNE3-212ENST00000621783 ZNF785A8K8V0 405 aa8.09□□□□□ -1.11
CPNE3-212ENST00000621783 F6UZH7 168 aa8.09□□□□□ -1.11
CPNE3-212ENST00000621783 PDE6DO43924 150 aa8.09□□□□□ -1.11
CPNE3-212ENST00000621783 ADCYAP1P18509 176 aa8.09□□□□□ -1.11
CPNE3-212ENST00000621783 MYCNOSP40205 109 aa8.09□□□□□ -1.11
CPNE3-212ENST00000621783 RANP62826 216 aaKnown RBP8.09□□□□□ -1.11
CPNE3-212ENST00000621783 PDE6HQ13956 83 aa8.09□□□□□ -1.11
CPNE3-212ENST00000621783 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.09□□□□□ -1.11
CPNE3-212ENST00000621783 CCDC28AQ8IWP9 274 aa8.09□□□□□ -1.11
CPNE3-212ENST00000621783 OR9G4Q8NGQ1 327 aa8.09□□□□□ -1.11
CPNE3-212ENST00000621783 ELOVL1Q9BW60 279 aa8.09□□□□□ -1.11
CPNE3-212ENST00000621783 SLC35B3Q9H1N7 401 aa8.09□□□□□ -1.11
CPNE3-212ENST00000621783 Q9H3A6 140 aa8.09□□□□□ -1.11
CPNE3-212ENST00000621783 OTORQ9NRC9 128 aa8.09□□□□□ -1.11
CPNE3-212ENST00000621783 PEMTQ9UBM1 199 aa8.09□□□□□ -1.11
CPNE3-212ENST00000621783 KRBOX1C9JBD0 128 aa8.08□□□□□ -1.12
CPNE3-212ENST00000621783 TMEM250H0YL14 139 aa8.08□□□□□ -1.12
CPNE3-212ENST00000621783 CEBPGP53567 150 aa8.08□□□□□ -1.12
CPNE3-212ENST00000621783 SUMO1P63165 101 aaKnown RBP8.08□□□□□ -1.12
CPNE3-212ENST00000621783 FAM90A2PQ658T7 463 aa8.08□□□□□ -1.12
CPNE3-212ENST00000621783 ADAMTSL5Q6ZMM2 481 aa8.08□□□□□ -1.12
CPNE3-212ENST00000621783 TCF24Q7RTU0 167 aa8.08□□□□□ -1.12
CPNE3-212ENST00000621783 EXOC3-AS1Q8N2X6 119 aa8.08□□□□□ -1.12
CPNE3-212ENST00000621783 C11orf52Q96A22 123 aa8.08□□□□□ -1.12
CPNE3-212ENST00000621783 CITED1Q99966 193 aa8.08□□□□□ -1.12
CPNE3-212ENST00000621783 NKX6-2Q9C056 277 aaPredicted RBP8.08□□□□□ -1.12
CPNE3-212ENST00000621783 SELENOKQ9Y6D0 94 aa8.08□□□□□ -1.12
CPNE3-212ENST00000621783 PGPA6NDG6 321 aa8.07□□□□□ -1.12
CPNE3-212ENST00000621783 HELTA6NFD8 242 aa8.07□□□□□ -1.12
CPNE3-212ENST00000621783 F8W036 122 aa8.07□□□□□ -1.12
CPNE3-212ENST00000621783 M0QZ24 198 aa8.07□□□□□ -1.12
CPNE3-212ENST00000621783 ZNF253O75346 499 aa8.07□□□□□ -1.12
CPNE3-212ENST00000621783 SLC25A5P05141 298 aaKnown RBP8.07□□□□□ -1.12
CPNE3-212ENST00000621783 FOLR2P14207 255 aa8.07□□□□□ -1.12
CPNE3-212ENST00000621783 S100A1P23297 94 aa8.07□□□□□ -1.12
CPNE3-212ENST00000621783 CBLN1P23435 193 aa8.07□□□□□ -1.12
CPNE3-212ENST00000621783 MEOX2P50222 304 aa8.07□□□□□ -1.12
CPNE3-212ENST00000621783 GNG5P63218 68 aa8.07□□□□□ -1.12
CPNE3-212ENST00000621783 LYPD1Q8N2G4 141 aa8.07□□□□□ -1.12
CPNE3-212ENST00000621783 C5orf17Q8NAS9 161 aa8.07□□□□□ -1.12
CPNE3-212ENST00000621783 RPUSD4Q96CM3 377 aaKnown RBP8.07□□□□□ -1.12
CPNE3-212ENST00000621783 SEC11CQ9BY50 192 aa8.07□□□□□ -1.12
CPNE3-212ENST00000621783 ZNF331Q9NQX6 463 aaPredicted RBP8.07□□□□□ -1.12
CPNE3-212ENST00000621783 MLXQ9UH92 298 aa8.07□□□□□ -1.12
CPNE3-212ENST00000621783 PEX7O00628 323 aa8.06□□□□□ -1.12
CPNE3-212ENST00000621783 OVOL1O14753 267 aa8.06□□□□□ -1.12
CPNE3-212ENST00000621783 CSN3P07498 182 aa8.06□□□□□ -1.12
CPNE3-212ENST00000621783 PSG9Q00887 426 aa8.06□□□□□ -1.12
CPNE3-212ENST00000621783 SOHLH1Q5JUK2 328 aa8.06□□□□□ -1.12
CPNE3-212ENST00000621783 C10orf91Q5T1B1 145 aa8.06□□□□□ -1.12
CPNE3-212ENST00000621783 TCEAL7Q9BRU2 100 aa8.06□□□□□ -1.12
CPNE3-212ENST00000621783 SLC50A1Q9BRV3 221 aa8.06□□□□□ -1.12
CPNE3-212ENST00000621783 PARLQ9H300 379 aa8.06□□□□□ -1.12
CPNE3-212ENST00000621783 AAMDCQ9H7C9 122 aa8.06□□□□□ -1.12
CPNE3-212ENST00000621783 RPH3ALQ9UNE2 315 aa8.06□□□□□ -1.12
CPNE3-212ENST00000621783 CARHSP1Q9Y2V2 147 aaKnown RBP8.06□□□□□ -1.12
CPNE3-212ENST00000621783 IGKV3-7A0A075B6H7 116 aa8.05□□□□□ -1.12
CPNE3-212ENST00000621783 TRAV8-2A0A0B4J237 113 aa8.05□□□□□ -1.12
CPNE3-212ENST00000621783 SOCS3O14543 225 aa8.05□□□□□ -1.12
CPNE3-212ENST00000621783 PF4P02776 101 aa8.05□□□□□ -1.12
CPNE3-212ENST00000621783 HLA-DMBP28068 263 aa8.05□□□□□ -1.12
CPNE3-212ENST00000621783 AKR1C3P42330 323 aa8.05□□□□□ -1.12
CPNE3-212ENST00000621783 RPL11P62913 178 aaKnown RBP8.05□□□□□ -1.12
CPNE3-212ENST00000621783 ZNF674Q2M3X9 581 aa8.05□□□□□ -1.12
CPNE3-212ENST00000621783 IGFL4Q6B9Z1 124 aa8.05□□□□□ -1.12
CPNE3-212ENST00000621783 DYNLRB2Q8TF09 96 aa8.05□□□□□ -1.12
CPNE3-212ENST00000621783 C2CD4CQ8TF44 421 aa8.05□□□□□ -1.12
CPNE3-212ENST00000621783 DERL1Q9BUN8 251 aa8.05□□□□□ -1.12
CPNE3-212ENST00000621783 NRN1Q9NPD7 142 aa8.05□□□□□ -1.12
CPNE3-212ENST00000621783 EPDR1Q9UM22 224 aa8.05□□□□□ -1.12
CPNE3-212ENST00000621783 ZNF727A8MUV8 499 aa8.04□□□□□ -1.12
CPNE3-212ENST00000621783 M0R3E3 92 aa8.04□□□□□ -1.12
CPNE3-212ENST00000621783 TCRAP04437 139 aa8.04□□□□□ -1.12
CPNE3-212ENST00000621783 GUCA2BQ16661 112 aa8.04□□□□□ -1.12
CPNE3-212ENST00000621783 RNF182Q8N6D2 247 aa8.04□□□□□ -1.12
CPNE3-212ENST00000621783 LINC00482Q8N8I6 264 aa8.04□□□□□ -1.12
CPNE3-212ENST00000621783 CMTM2Q8TAZ6 248 aa8.04□□□□□ -1.12
CPNE3-212ENST00000621783 HIST1H2BAQ96A08 127 aa8.04□□□□□ -1.12
CPNE3-212ENST00000621783 C16orf92Q96LL3 132 aa8.04□□□□□ -1.12
CPNE3-212ENST00000621783 SMIM7Q9BQ49 75 aa8.04□□□□□ -1.12
CPNE3-212ENST00000621783 ATG101Q9BSB4 218 aa8.04□□□□□ -1.12
CPNE3-212ENST00000621783 C2CD3Q4AC94 2353 aa8.04□□□□□ -1.12
CPNE3-212ENST00000621783 APOC3P02656 99 aa8.03□□□□□ -1.12
CPNE3-212ENST00000621783 PRB4P10163 310 aaPredicted RBP8.03□□□□□ -1.12
CPNE3-212ENST00000621783 RPL35P42766 123 aaKnown RBP8.03□□□□□ -1.12
CPNE3-212ENST00000621783 CNN1P51911 297 aaKnown RBP8.03□□□□□ -1.12
CPNE3-212ENST00000621783 FAM74A3Q4VXF1 159 aa8.03□□□□□ -1.12
CPNE3-212ENST00000621783 ZNF747Q9BV97 191 aa8.03□□□□□ -1.12
CPNE3-212ENST00000621783 MS4A6AQ9H2W1 248 aa8.03□□□□□ -1.12
CPNE3-212ENST00000621783 SIGLEC8Q9NYZ4 499 aa8.03□□□□□ -1.12
CPNE3-212ENST00000621783 PRELID1Q9Y255 219 aa8.03□□□□□ -1.12
CPNE3-212ENST00000621783 TRBV20OR9-2A0A075B6H5 130 aa8.02□□□□□ -1.13
CPNE3-212ENST00000621783 TRAV34A0A0B4J273 112 aa8.02□□□□□ -1.13
CPNE3-212ENST00000621783 DIRC3C9JPN6 131 aa8.02□□□□□ -1.13
CPNE3-212ENST00000621783 CSN1S1P47710 185 aa8.02□□□□□ -1.13
CPNE3-212ENST00000621783 DEFB114Q30KQ6 69 aa8.02□□□□□ -1.13
CPNE3-212ENST00000621783 CENPWQ5EE01 88 aa8.02□□□□□ -1.13
CPNE3-212ENST00000621783 SAMD13Q5VXD3 122 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms