RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 RETNQ9HD89 108 aa10.51□□□□□ -0.73
CBWD3-217ENST00000621474 ZNF331Q9NQX6 463 aaPredicted RBP10.51□□□□□ -0.73
CBWD3-217ENST00000621474 ZNF586Q9NXT0 402 aa10.51□□□□□ -0.73
CBWD3-217ENST00000621474 TMEM14CQ9P0S9 112 aa10.51□□□□□ -0.73
CBWD3-217ENST00000621474 FUT9Q9Y231 359 aa10.51□□□□□ -0.73
CBWD3-217ENST00000621474 KIR2DL5BA0A0G2JN68 375 aa10.51□□□□□ -0.73
CBWD3-217ENST00000621474 KIR2DL5BA0A0G2JPC4 375 aa10.51□□□□□ -0.73
CBWD3-217ENST00000621474 F6UB75 175 aa10.51□□□□□ -0.73
CBWD3-217ENST00000621474 EIF3GO75821 320 aaKnown RBP eCLIP10.51□□□□□ -0.73
CBWD3-217ENST00000621474 GIG44P09565 113 aaPredicted RBP10.51□□□□□ -0.73
CBWD3-217ENST00000621474 ID1P41134 155 aa10.51□□□□□ -0.73
CBWD3-217ENST00000621474 RAB2AP61019 212 aa10.51□□□□□ -0.73
CBWD3-217ENST00000621474 KIR2DL5AQ8N109 375 aa10.51□□□□□ -0.73
CBWD3-217ENST00000621474 KIR2DL5BQ8NHK3 375 aa10.51□□□□□ -0.73
CBWD3-217ENST00000621474 SAV1Q9H4B6 383 aaPredicted RBP10.51□□□□□ -0.73
CBWD3-217ENST00000621474 H3BMM0 161 aa10.5□□□□□ -0.73
CBWD3-217ENST00000621474 HLA-DRB4P13762 266 aa10.5□□□□□ -0.73
CBWD3-217ENST00000621474 M6PRP20645 277 aa10.5□□□□□ -0.73
CBWD3-217ENST00000621474 LCN15Q6UWW0 184 aa10.5□□□□□ -0.73
CBWD3-217ENST00000621474 STHQ8IWL8 128 aa10.5□□□□□ -0.73
CBWD3-217ENST00000621474 HLA-DRB4X5D2U9 266 aa10.5□□□□□ -0.73
CBWD3-217ENST00000621474 DNAH7Q8WXX0 4024 aa10.49□□□□□ -0.73
CBWD3-217ENST00000621474 TAAR5O14804 337 aa10.49□□□□□ -0.73
CBWD3-217ENST00000621474 NDUFB4O95168 129 aa10.49□□□□□ -0.73
CBWD3-217ENST00000621474 PRB4P10163 310 aaPredicted RBP10.49□□□□□ -0.73
CBWD3-217ENST00000621474 SPATA25Q9BR10 227 aa10.49□□□□□ -0.73
CBWD3-217ENST00000621474 TRBV19A0A075B6N1 114 aa10.48□□□□□ -0.73
CBWD3-217ENST00000621474 A0A0J9YX75 114 aa10.48□□□□□ -0.73
CBWD3-217ENST00000621474 JTBO76095 146 aa10.48□□□□□ -0.73
CBWD3-217ENST00000621474 C4BPBP20851 252 aa10.48□□□□□ -0.73
CBWD3-217ENST00000621474 APOC4P55056 127 aa10.48□□□□□ -0.73
CBWD3-217ENST00000621474 ACOT6Q3I5F7 207 aaPredicted RBP10.48□□□□□ -0.73
CBWD3-217ENST00000621474 FOXI2Q6ZQN5 318 aa10.48□□□□□ -0.73
CBWD3-217ENST00000621474 AKAP14Q86UN6 197 aa10.48□□□□□ -0.73
CBWD3-217ENST00000621474 RPP25LQ8N5L8 163 aaKnown RBP10.48□□□□□ -0.73
CBWD3-217ENST00000621474 FXYD5Q96DB9 178 aa10.48□□□□□ -0.73
CBWD3-217ENST00000621474 RCHY1Q96PM5 261 aa10.48□□□□□ -0.73
CBWD3-217ENST00000621474 CSTL1Q9H114 145 aa10.48□□□□□ -0.73
CBWD3-217ENST00000621474 BORCS7-ASMTA0A0B4J1R7 106 aa10.47□□□□□ -0.73
CBWD3-217ENST00000621474 C1QBP02746 253 aa10.47□□□□□ -0.73
CBWD3-217ENST00000621474 HIST1H1EP10412 219 aaKnown RBP10.47□□□□□ -0.73
CBWD3-217ENST00000621474 RHOBP62745 196 aa10.47□□□□□ -0.73
CBWD3-217ENST00000621474 SERF2P84101 59 aa10.47□□□□□ -0.73
CBWD3-217ENST00000621474 DEFB135Q30KP9 77 aa10.47□□□□□ -0.73
CBWD3-217ENST00000621474 Q6ZWC4 215 aa10.47□□□□□ -0.73
CBWD3-217ENST00000621474 ARPC5LQ9BPX5 153 aa10.47□□□□□ -0.73
CBWD3-217ENST00000621474 OVOL2Q9BRP0 275 aa10.47□□□□□ -0.73
CBWD3-217ENST00000621474 SLC50A1Q9BRV3 221 aa10.47□□□□□ -0.73
CBWD3-217ENST00000621474 OR51M1Q9H341 326 aa10.47□□□□□ -0.73
CBWD3-217ENST00000621474 ZMAT4Q9H898 229 aa10.47□□□□□ -0.73
CBWD3-217ENST00000621474 RPRMQ9NS64 109 aa10.47□□□□□ -0.73
CBWD3-217ENST00000621474 U3KQK5 164 aa10.47□□□□□ -0.73
CBWD3-217ENST00000621474 A0A0D9SG52 128 aa10.47□□□□□ -0.73
CBWD3-217ENST00000621474 ZNF253O75346 499 aa10.47□□□□□ -0.73
CBWD3-217ENST00000621474 OR10J4P0C629 311 aa10.47□□□□□ -0.73
CBWD3-217ENST00000621474 PSG3Q16557 428 aa10.47□□□□□ -0.73
CBWD3-217ENST00000621474 GUK1Q16774 197 aa10.47□□□□□ -0.73
CBWD3-217ENST00000621474 LGALSLQ3ZCW2 172 aaPredicted RBP10.47□□□□□ -0.73
CBWD3-217ENST00000621474 OR10G4Q8NGN3 311 aa10.47□□□□□ -0.73
CBWD3-217ENST00000621474 OR10G9Q8NGN4 311 aa10.47□□□□□ -0.73
CBWD3-217ENST00000621474 OR10G7Q8NGN6 311 aa10.47□□□□□ -0.73
CBWD3-217ENST00000621474 GNPNAT1Q96EK6 184 aaPredicted RBP10.47□□□□□ -0.73
CBWD3-217ENST00000621474 A8MTW9 85 aa10.46□□□□□ -0.74
CBWD3-217ENST00000621474 ZNF705FA8MVS1 300 aaPredicted RBP10.46□□□□□ -0.74
CBWD3-217ENST00000621474 UBE2CO00762 179 aa10.46□□□□□ -0.74
CBWD3-217ENST00000621474 BCL2L11O43521 198 aa10.46□□□□□ -0.74
CBWD3-217ENST00000621474 CA1P00915 261 aaPredicted RBP10.46□□□□□ -0.74
CBWD3-217ENST00000621474 ZNF705DP0CH99 300 aaPredicted RBP10.46□□□□□ -0.74
CBWD3-217ENST00000621474 ZNF705BP0CI00 300 aaPredicted RBP10.46□□□□□ -0.74
CBWD3-217ENST00000621474 SPP1P10451 314 aa10.46□□□□□ -0.74
CBWD3-217ENST00000621474 PDE6HQ13956 83 aa10.46□□□□□ -0.74
CBWD3-217ENST00000621474 FAM122CQ6P4D5 195 aa10.46□□□□□ -0.74
CBWD3-217ENST00000621474 SSX7Q7RTT5 188 aa10.46□□□□□ -0.74
CBWD3-217ENST00000621474 LRRC20Q8TCA0 184 aa10.46□□□□□ -0.74
CBWD3-217ENST00000621474 PAXXQ9BUH6 204 aa10.46□□□□□ -0.74
CBWD3-217ENST00000621474 OR7C2O60412 319 aa10.45□□□□□ -0.74
CBWD3-217ENST00000621474 KHDC3LQ587J8 217 aa10.45□□□□□ -0.74
CBWD3-217ENST00000621474 AMTNQ6UX39 209 aa10.45□□□□□ -0.74
CBWD3-217ENST00000621474 TMUB2Q71RG4 321 aa10.45□□□□□ -0.74
CBWD3-217ENST00000621474 CSNK1G2-AS1Q8NCQ2 148 aa10.45□□□□□ -0.74
CBWD3-217ENST00000621474 BLNKQ8WV28 456 aa10.45□□□□□ -0.74
CBWD3-217ENST00000621474 RNF141Q8WVD5 230 aa10.45□□□□□ -0.74
CBWD3-217ENST00000621474 RNF183Q96D59 192 aa10.45□□□□□ -0.74
CBWD3-217ENST00000621474 CLUHP3Q96NS8 147 aa10.45□□□□□ -0.74
CBWD3-217ENST00000621474 PLA2G2EQ9NZK7 142 aa10.45□□□□□ -0.74
CBWD3-217ENST00000621474 CSMD3Q7Z407 3707 aa10.44□□□□□ -0.74
CBWD3-217ENST00000621474 PRAC2D3DTV9 90 aa10.44□□□□□ -0.74
CBWD3-217ENST00000621474 HMGB3O15347 200 aaKnown RBP10.44□□□□□ -0.74
CBWD3-217ENST00000621474 IGKV3-20P01619 116 aa10.44□□□□□ -0.74
CBWD3-217ENST00000621474 NBEAP1P0C6P0 100 aa10.44□□□□□ -0.74
CBWD3-217ENST00000621474 CDC34P49427 236 aaPredicted RBP10.44□□□□□ -0.74
CBWD3-217ENST00000621474 CNN1P51911 297 aaKnown RBP10.44□□□□□ -0.74
CBWD3-217ENST00000621474 ZNF726P1Q15940 193 aa10.44□□□□□ -0.74
CBWD3-217ENST00000621474 TMEM41BQ5BJD5 291 aa10.44□□□□□ -0.74
CBWD3-217ENST00000621474 EXOC3-AS1Q8N2X6 119 aa10.44□□□□□ -0.74
CBWD3-217ENST00000621474 ZNF738Q8NE65 137 aa10.44□□□□□ -0.74
CBWD3-217ENST00000621474 RAB24Q969Q5 203 aa10.44□□□□□ -0.74
CBWD3-217ENST00000621474 PHYHIPLQ96FC7 376 aa10.44□□□□□ -0.74
CBWD3-217ENST00000621474 TP53TG1Q9Y2A0 90 aa10.44□□□□□ -0.74
CBWD3-217ENST00000621474 A0A1W2PPV4 95 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms