RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 RMI2Q96E14 147 aa7.93□□□□□ -1.14
CLTCL1-211ENST00000621271 TRAV3A0A0B4J244 114 aa7.93□□□□□ -1.14
CLTCL1-211ENST00000621271 GNB1LQ9BYB4 327 aa7.93□□□□□ -1.14
CLTCL1-211ENST00000621271 A0A1B0GUS0 222 aa7.93□□□□□ -1.14
CLTCL1-211ENST00000621271 TCTEX1D4Q5JR98 221 aa7.93□□□□□ -1.14
CLTCL1-211ENST00000621271 OSTCQ9NRP0 149 aa7.93□□□□□ -1.14
CLTCL1-211ENST00000621271 SCN8AQ9UQD0 1980 aa7.92□□□□□ -1.14
CLTCL1-211ENST00000621271 HEATR1Q9H583 2144 aaKnown RBP7.92□□□□□ -1.14
CLTCL1-211ENST00000621271 ARFGEF3Q5TH69 2177 aa7.92□□□□□ -1.14
CLTCL1-211ENST00000621271 ELANEP08246 267 aa7.92□□□□□ -1.14
CLTCL1-211ENST00000621271 DOCK8Q8NF50 2099 aa7.92□□□□□ -1.14
CLTCL1-211ENST00000621271 TANC1Q9C0D5 1861 aa7.92□□□□□ -1.14
CLTCL1-211ENST00000621271 PSG3Q16557 428 aa7.92□□□□□ -1.14
CLTCL1-211ENST00000621271 TSSC4Q9Y5U2 329 aaPredicted RBP7.92□□□□□ -1.14
CLTCL1-211ENST00000621271 HBDP02042 147 aa7.92□□□□□ -1.14
CLTCL1-211ENST00000621271 LINC00614P0C842 121 aa7.92□□□□□ -1.14
CLTCL1-211ENST00000621271 CFPP27918 469 aa7.92□□□□□ -1.14
CLTCL1-211ENST00000621271 OCC1Q8TAD7 63 aa7.92□□□□□ -1.14
CLTCL1-211ENST00000621271 GGTLC1Q9BX51 225 aa7.92□□□□□ -1.14
CLTCL1-211ENST00000621271 TRBV6-6A0A0A6YYG2 114 aa7.92□□□□□ -1.14
CLTCL1-211ENST00000621271 G3V318 75 aa7.92□□□□□ -1.14
CLTCL1-211ENST00000621271 QRFPP83859 136 aa7.92□□□□□ -1.14
CLTCL1-211ENST00000621271 GZMBP10144 247 aa7.91□□□□□ -1.14
CLTCL1-211ENST00000621271 COL4A6Q14031 1691 aa7.91□□□□□ -1.14
CLTCL1-211ENST00000621271 TEX43Q6ZNM6 134 aa7.91□□□□□ -1.14
CLTCL1-211ENST00000621271 FOXL2NBQ6ZUU3 175 aa7.91□□□□□ -1.14
CLTCL1-211ENST00000621271 SSBP4Q9BWG4 385 aaPredicted RBP7.91□□□□□ -1.14
CLTCL1-211ENST00000621271 SPCS1Q9Y6A9 102 aa7.91□□□□□ -1.14
CLTCL1-211ENST00000621271 PGPEP1LA6NFU8 196 aa7.91□□□□□ -1.14
CLTCL1-211ENST00000621271 LINC00473A8K010 186 aa7.91□□□□□ -1.14
CLTCL1-211ENST00000621271 ZNF561-AS1K7EIQ3 104 aa7.91□□□□□ -1.14
CLTCL1-211ENST00000621271 PAX4O43316 350 aa7.91□□□□□ -1.14
CLTCL1-211ENST00000621271 MRPL52Q86TS9 123 aaKnown RBP7.91□□□□□ -1.14
CLTCL1-211ENST00000621271 Q8TAT8 98 aa7.91□□□□□ -1.14
CLTCL1-211ENST00000621271 VPREB3Q9UKI3 123 aa7.91□□□□□ -1.14
CLTCL1-211ENST00000621271 LMO1P25800 156 aa7.91□□□□□ -1.14
CLTCL1-211ENST00000621271 AGMATQ9BSE5 352 aa7.91□□□□□ -1.14
CLTCL1-211ENST00000621271 CHTOPQ9Y3Y2 248 aaKnown RBP7.91□□□□□ -1.14
CLTCL1-211ENST00000621271 C5orf63A6NC05 138 aa7.9□□□□□ -1.14
CLTCL1-211ENST00000621271 SNAI2O43623 268 aa7.9□□□□□ -1.14
CLTCL1-211ENST00000621271 CFHR3Q02985 330 aa7.9□□□□□ -1.14
CLTCL1-211ENST00000621271 IGFL4Q6B9Z1 124 aa7.9□□□□□ -1.14
CLTCL1-211ENST00000621271 RASL10AQ92737 203 aa7.9□□□□□ -1.14
CLTCL1-211ENST00000621271 ACACBO00763 2458 aa7.9□□□□□ -1.14
CLTCL1-211ENST00000621271 IGKV1-16P04430 117 aa7.9□□□□□ -1.14
CLTCL1-211ENST00000621271 TCRAP04437 139 aa7.9□□□□□ -1.14
CLTCL1-211ENST00000621271 NMSQ5H8A3 153 aa7.9□□□□□ -1.14
CLTCL1-211ENST00000621271 LYPD1Q8N2G4 141 aa7.9□□□□□ -1.14
CLTCL1-211ENST00000621271 ZNF664Q8N3J9 261 aa7.9□□□□□ -1.14
CLTCL1-211ENST00000621271 VCYO14598 125 aa7.9□□□□□ -1.14
CLTCL1-211ENST00000621271 TSPAN13O95857 204 aa7.9□□□□□ -1.14
CLTCL1-211ENST00000621271 IGF2-ASQ6U949 168 aa7.9□□□□□ -1.14
CLTCL1-211ENST00000621271 TSKUQ8WUA8 353 aa7.9□□□□□ -1.14
CLTCL1-211ENST00000621271 C9JQL5 133 aa7.9□□□□□ -1.15
CLTCL1-211ENST00000621271 ITGB1BP1O14713 200 aa7.9□□□□□ -1.15
CLTCL1-211ENST00000621271 DPM2O94777 84 aa7.9□□□□□ -1.15
CLTCL1-211ENST00000621271 DLX4Q92988 240 aaPredicted RBP7.9□□□□□ -1.15
CLTCL1-211ENST00000621271 FREM3P0C091 2139 aa7.9□□□□□ -1.15
CLTCL1-211ENST00000621271 IGHV3-64A0A075B6Q5 118 aa7.89□□□□□ -1.15
CLTCL1-211ENST00000621271 RHODO00212 210 aa7.89□□□□□ -1.15
CLTCL1-211ENST00000621271 LOXP28300 417 aaPredicted RBP7.89□□□□□ -1.15
CLTCL1-211ENST00000621271 DEFB112Q30KQ8 113 aa7.89□□□□□ -1.15
CLTCL1-211ENST00000621271 C10orf91Q5T1B1 145 aa7.89□□□□□ -1.15
CLTCL1-211ENST00000621271 ARTNQ5T4W7 220 aa7.89□□□□□ -1.15
CLTCL1-211ENST00000621271 LINC01551Q86U37 167 aa7.89□□□□□ -1.15
CLTCL1-211ENST00000621271 TMEM158Q8WZ71 300 aa7.89□□□□□ -1.15
CLTCL1-211ENST00000621271 TP53BP1Q12888 1972 aaPredicted RBP7.89□□□□□ -1.15
CLTCL1-211ENST00000621271 TRAV2A0A0B4J234 112 aa7.89□□□□□ -1.15
CLTCL1-211ENST00000621271 TRAV13-1A0A0B4J241 112 aa7.89□□□□□ -1.15
CLTCL1-211ENST00000621271 NDUFB8O95169 186 aa7.89□□□□□ -1.15
CLTCL1-211ENST00000621271 IGHV2-70P01814 119 aa7.89□□□□□ -1.15
CLTCL1-211ENST00000621271 RPP25LQ8N5L8 163 aaKnown RBP7.89□□□□□ -1.15
CLTCL1-211ENST00000621271 C5orf30Q96GV9 206 aa7.89□□□□□ -1.15
CLTCL1-211ENST00000621271 DOCK10Q96BY6 2186 aa7.89□□□□□ -1.15
CLTCL1-211ENST00000621271 LAGE3Q14657 143 aa7.89□□□□□ -1.15
CLTCL1-211ENST00000621271 SPINK13Q1W4C9 94 aa7.89□□□□□ -1.15
CLTCL1-211ENST00000621271 LSM4Q9Y4Z0 139 aaKnown RBP7.89□□□□□ -1.15
CLTCL1-211ENST00000621271 PAX2Q02962 417 aa7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 C10orf126Q8N4M7 172 aa7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 C14orf178Q8N769 122 aaPredicted RBP7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 H3BUT2 72 aa7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 NDUFS7O75251 213 aa7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 GRNP28799 593 aaKnown RBP7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 SSBP2P81877 361 aaPredicted RBP7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 FHL1Q13642 323 aa7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 GAGE12BA1L429 117 aa7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 GAGE7O76087 117 aa7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 IGKV1-5P01602 117 aa7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 GAGE12FP0CL80 117 aa7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 GAGE12GP0CL81 117 aa7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 GAGE12IP0CL82 117 aa7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 CD300EQ496F6 205 aaPredicted RBP7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 MRPL27Q9P0M9 148 aaKnown RBP7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 IGLV3-9A0A075B6K5 115 aa7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 A0A1W2PPI3 338 aa7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 GAGE12JA6NER3 117 aa7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 GGTLC3B5MD39 225 aa7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 RNASE2P10153 161 aaKnown RBP7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 GAGE1Q13065 139 aa7.88□□□□□ -1.15
CLTCL1-211ENST00000621271 GAGE4Q13068 117 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms