RNA–Protein interactions for RNA: ENST00000619750.1

PCDHGA3-203, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA3, Length 2,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-203ENST00000619750 CRYGBP07316 175 aa11.33□□□□□ -0.6
PCDHGA3-203ENST00000619750 CBY3A6NI87 242 aa11.32□□□□□ -0.6
PCDHGA3-203ENST00000619750 I3L2K1 104 aa11.32□□□□□ -0.6
PCDHGA3-203ENST00000619750 NCR2O95944 276 aa11.32□□□□□ -0.6
PCDHGA3-203ENST00000619750 LOXL1Q08397 574 aaPredicted RBP11.32□□□□□ -0.6
PCDHGA3-203ENST00000619750 A0A087X0K7 114 aa11.32□□□□□ -0.6
PCDHGA3-203ENST00000619750 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.32□□□□□ -0.6
PCDHGA3-203ENST00000619750 APOHP02749 345 aaPredicted RBP11.32□□□□□ -0.6
PCDHGA3-203ENST00000619750 COX11Q9Y6N1 276 aa11.32□□□□□ -0.6
PCDHGA3-203ENST00000619750 CRIP1P50238 77 aa11.32□□□□□ -0.6
PCDHGA3-203ENST00000619750 FAM71F2Q6NXP2 309 aa11.32□□□□□ -0.6
PCDHGA3-203ENST00000619750 NGBQ9NPG2 151 aa11.32□□□□□ -0.6
PCDHGA3-203ENST00000619750 OTORQ9NRC9 128 aa11.32□□□□□ -0.6
PCDHGA3-203ENST00000619750 RNF24Q9Y225 148 aa11.32□□□□□ -0.6
PCDHGA3-203ENST00000619750 TMEM213A2RRL7 107 aa11.31□□□□□ -0.6
PCDHGA3-203ENST00000619750 K7EIM0 57 aa11.31□□□□□ -0.6
PCDHGA3-203ENST00000619750 MRPS16Q9Y3D3 137 aaKnown RBP11.31□□□□□ -0.6
PCDHGA3-203ENST00000619750 VAMP3Q15836 100 aa11.31□□□□□ -0.6
PCDHGA3-203ENST00000619750 WFDC3Q8IUB2 231 aa11.31□□□□□ -0.6
PCDHGA3-203ENST00000619750 MUC15Q8N387 334 aa11.31□□□□□ -0.6
PCDHGA3-203ENST00000619750 Q8TAT8 98 aa11.31□□□□□ -0.6
PCDHGA3-203ENST00000619750 PPP1R14DQ9NXH3 145 aa11.31□□□□□ -0.6
PCDHGA3-203ENST00000619750 HLA-DRB1P01911 266 aa11.3□□□□□ -0.6
PCDHGA3-203ENST00000619750 UCNP55089 124 aa11.3□□□□□ -0.6
PCDHGA3-203ENST00000619750 OR8A1Q8NGG7 326 aa11.3□□□□□ -0.6
PCDHGA3-203ENST00000619750 TRBV19A0A075B6N1 114 aa11.3□□□□□ -0.6
PCDHGA3-203ENST00000619750 IGKV2-40A0A087WW87 121 aaPredicted RBP11.3□□□□□ -0.6
PCDHGA3-203ENST00000619750 A0A1B0GUT8 65 aa11.3□□□□□ -0.6
PCDHGA3-203ENST00000619750 VSTM5A8MXK1 200 aa11.3□□□□□ -0.6
PCDHGA3-203ENST00000619750 SMKR1H3BMG3 65 aa11.3□□□□□ -0.6
PCDHGA3-203ENST00000619750 IGKV2D-40P01614 121 aaPredicted RBP11.3□□□□□ -0.6
PCDHGA3-203ENST00000619750 ZNF738Q8NE65 137 aa11.3□□□□□ -0.6
PCDHGA3-203ENST00000619750 ZNF492Q9P255 531 aa11.3□□□□□ -0.6
PCDHGA3-203ENST00000619750 KAAG1Q9UBP8 84 aa11.3□□□□□ -0.6
PCDHGA3-203ENST00000619750 PSG8Q9UQ74 426 aa11.3□□□□□ -0.6
PCDHGA3-203ENST00000619750 RAXQ9Y2V3 346 aa11.3□□□□□ -0.6
PCDHGA3-203ENST00000619750 OR2T8A6NH00 312 aa11.29□□□□□ -0.6
PCDHGA3-203ENST00000619750 OVOL3O00110 214 aa11.29□□□□□ -0.6
PCDHGA3-203ENST00000619750 HLA-DMBP28068 263 aa11.29□□□□□ -0.6
PCDHGA3-203ENST00000619750 SIGLEC15Q6ZMC9 328 aa11.29□□□□□ -0.6
PCDHGA3-203ENST00000619750 BPIFA4PQ86YQ2 179 aa11.29□□□□□ -0.6
PCDHGA3-203ENST00000619750 RNF125Q96EQ8 232 aa11.29□□□□□ -0.6
PCDHGA3-203ENST00000619750 MAP1LC3CQ9BXW4 147 aa11.29□□□□□ -0.6
PCDHGA3-203ENST00000619750 IFI27P40305 119 aaPredicted RBP11.29□□□□□ -0.6
PCDHGA3-203ENST00000619750 C8orf31Q8N9H6 132 aa11.29□□□□□ -0.6
PCDHGA3-203ENST00000619750 PRSS3P2Q8NHM4 247 aa11.29□□□□□ -0.6
PCDHGA3-203ENST00000619750 APOBEC3AP31941 199 aaPredicted RBP11.28□□□□□ -0.6
PCDHGA3-203ENST00000619750 AMN1Q8IY45 258 aa11.28□□□□□ -0.6
PCDHGA3-203ENST00000619750 ZNF491Q8N8L2 437 aa11.28□□□□□ -0.6
PCDHGA3-203ENST00000619750 SPTBN4Q9H254 2564 aa11.28□□□□□ -0.6
PCDHGA3-203ENST00000619750 NPIPB6E9PJ23 425 aa11.28□□□□□ -0.6
PCDHGA3-203ENST00000619750 CD3EP07766 207 aa11.28□□□□□ -0.6
PCDHGA3-203ENST00000619750 RNF151Q2KHN1 245 aa11.28□□□□□ -0.6
PCDHGA3-203ENST00000619750 TMEM75Q8N9X5 138 aa11.28□□□□□ -0.6
PCDHGA3-203ENST00000619750 NEU4Q8WWR8 484 aaPredicted RBP11.28□□□□□ -0.6
PCDHGA3-203ENST00000619750 LOC105371242A0A075B767 164 aa11.27□□□□□ -0.6
PCDHGA3-203ENST00000619750 NCBP2LA6PVI3 153 aaKnown RBP11.27□□□□□ -0.6
PCDHGA3-203ENST00000619750 HSBP1L1C9JCN9 74 aa11.27□□□□□ -0.6
PCDHGA3-203ENST00000619750 D6R8Y8 96 aa11.27□□□□□ -0.6
PCDHGA3-203ENST00000619750 GNG7O60262 68 aa11.27□□□□□ -0.6
PCDHGA3-203ENST00000619750 PCP4P48539 62 aa11.27□□□□□ -0.6
PCDHGA3-203ENST00000619750 PLP1P60201 277 aa11.27□□□□□ -0.6
PCDHGA3-203ENST00000619750 RBPJQ06330 500 aa11.27□□□□□ -0.6
PCDHGA3-203ENST00000619750 CT83Q5H943 113 aa11.27□□□□□ -0.6
PCDHGA3-203ENST00000619750 SLC25A34Q6PIV7 304 aa11.27□□□□□ -0.6
PCDHGA3-203ENST00000619750 ORAOV1Q8WV07 137 aa11.27□□□□□ -0.6
PCDHGA3-203ENST00000619750 CHCHD1Q96BP2 118 aaKnown RBP11.27□□□□□ -0.6
PCDHGA3-203ENST00000619750 SHANK2-AS3Q9BTD1 123 aa11.27□□□□□ -0.6
PCDHGA3-203ENST00000619750 TMEM191AQ9H0A3 160 aa11.27□□□□□ -0.6
PCDHGA3-203ENST00000619750 AP5S1Q9NUS5 200 aa11.27□□□□□ -0.6
PCDHGA3-203ENST00000619750 LIPFP07098 398 aa11.27□□□□□ -0.61
PCDHGA3-203ENST00000619750 OR5AL1P0C617 328 aa11.27□□□□□ -0.61
PCDHGA3-203ENST00000619750 CDSNQ15517 529 aa11.27□□□□□ -0.61
PCDHGA3-203ENST00000619750 IGHV3OR16-13A0A075B7E8 117 aa11.26□□□□□ -0.61
PCDHGA3-203ENST00000619750 IGHV3-74A0A0B4J1X5 117 aa11.26□□□□□ -0.61
PCDHGA3-203ENST00000619750 HAX1O00165 279 aa11.26□□□□□ -0.61
PCDHGA3-203ENST00000619750 UBE2V1Q13404 147 aa11.26□□□□□ -0.61
PCDHGA3-203ENST00000619750 ZNF672Q499Z4 452 aaPredicted RBP11.26□□□□□ -0.61
PCDHGA3-203ENST00000619750 PVRIGQ6DKI7 326 aa11.26□□□□□ -0.61
PCDHGA3-203ENST00000619750 LYZL1Q6UWQ5 148 aa11.26□□□□□ -0.61
PCDHGA3-203ENST00000619750 OR4C5Q8NGB2 326 aa11.26□□□□□ -0.61
PCDHGA3-203ENST00000619750 NAA38Q9BRA0 125 aaKnown RBP11.26□□□□□ -0.61
PCDHGA3-203ENST00000619750 NDFIP1Q9BT67 221 aa11.26□□□□□ -0.61
PCDHGA3-203ENST00000619750 JKAMPQ9P055 326 aa11.26□□□□□ -0.61
PCDHGA3-203ENST00000619750 H3BRN7 92 aa11.26□□□□□ -0.61
PCDHGA3-203ENST00000619750 UQCRFS1P47985 274 aa11.26□□□□□ -0.61
PCDHGA3-203ENST00000619750 NDPQ00604 133 aa11.26□□□□□ -0.61
PCDHGA3-203ENST00000619750 PSG3Q16557 428 aa11.26□□□□□ -0.61
PCDHGA3-203ENST00000619750 FA2HQ7L5A8 372 aa11.26□□□□□ -0.61
PCDHGA3-203ENST00000619750 SMIM12Q96EX1 92 aa11.26□□□□□ -0.61
PCDHGA3-203ENST00000619750 ZNF414Q96IQ9 312 aa11.26□□□□□ -0.61
PCDHGA3-203ENST00000619750 GFRA4Q9GZZ7 299 aa11.26□□□□□ -0.61
PCDHGA3-203ENST00000619750 CBY1Q9Y3M2 126 aa11.26□□□□□ -0.61
PCDHGA3-203ENST00000619750 IGHV3-66A0A0C4DH42 116 aa11.25□□□□□ -0.61
PCDHGA3-203ENST00000619750 CRXO43186 299 aaPredicted RBP11.25□□□□□ -0.61
PCDHGA3-203ENST00000619750 BVES-AS1Q5T3Y7 98 aa11.25□□□□□ -0.61
PCDHGA3-203ENST00000619750 PPIFP30405 207 aaKnown RBP11.24□□□□□ -0.61
PCDHGA3-203ENST00000619750 ST20Q9HBF5 79 aa11.24□□□□□ -0.61
PCDHGA3-203ENST00000619750 SCRT2Q9NQ03 307 aa11.24□□□□□ -0.61
PCDHGA3-203ENST00000619750 C1RLQ9NZP8 487 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms