RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 ZNF503Q96F45 646 aa5.61□□□□□ -1.51
SRGAP3-213ENST00000618999 RPUSD1Q9UJJ7 312 aaKnown RBP5.61□□□□□ -1.51
SRGAP3-213ENST00000618999 IGKV1OR2-108A0A075B7D4 117 aa5.61□□□□□ -1.51
SRGAP3-213ENST00000618999 IGHV3-21A0A0B4J1V1 117 aa5.61□□□□□ -1.51
SRGAP3-213ENST00000618999 K7EP13 123 aa5.61□□□□□ -1.51
SRGAP3-213ENST00000618999 IGLV2-8P01709 118 aa5.61□□□□□ -1.51
SRGAP3-213ENST00000618999 C17orf58Q2M2W7 97 aa5.61□□□□□ -1.51
SRGAP3-213ENST00000618999 DUX4L9Q6RFH8 374 aaPredicted RBP5.61□□□□□ -1.51
SRGAP3-213ENST00000618999 SMIM12Q96EX1 92 aa5.61□□□□□ -1.51
SRGAP3-213ENST00000618999 CST9LQ9H4G1 147 aa5.61□□□□□ -1.51
SRGAP3-213ENST00000618999 HIGD1AQ9Y241 93 aa5.61□□□□□ -1.51
SRGAP3-213ENST00000618999 MED13LQ71F56 2210 aa5.61□□□□□ -1.51
SRGAP3-213ENST00000618999 OR2T8A6NH00 312 aa5.6□□□□□ -1.51
SRGAP3-213ENST00000618999 NDUFB3O43676 98 aa5.6□□□□□ -1.51
SRGAP3-213ENST00000618999 WFDC3Q8IUB2 231 aa5.6□□□□□ -1.51
SRGAP3-213ENST00000618999 OR4F17Q8NGA8 305 aa5.6□□□□□ -1.51
SRGAP3-213ENST00000618999 BBC3Q96PG8 261 aaPredicted RBP5.6□□□□□ -1.51
SRGAP3-213ENST00000618999 CHTOPQ9Y3Y2 248 aaKnown RBP5.6□□□□□ -1.51
SRGAP3-213ENST00000618999 IGHV1-24A0A0C4DH33 117 aa5.6□□□□□ -1.51
SRGAP3-213ENST00000618999 TMEM178BH3BS89 294 aa5.6□□□□□ -1.51
SRGAP3-213ENST00000618999 SNAI2O43623 268 aa5.6□□□□□ -1.51
SRGAP3-213ENST00000618999 LY6HO94772 140 aa5.6□□□□□ -1.51
SRGAP3-213ENST00000618999 APOHP02749 345 aaPredicted RBP5.6□□□□□ -1.51
SRGAP3-213ENST00000618999 RBP4P02753 201 aa5.6□□□□□ -1.51
SRGAP3-213ENST00000618999 GYPEP15421 78 aa5.6□□□□□ -1.51
SRGAP3-213ENST00000618999 RBX1P62877 108 aa5.6□□□□□ -1.51
SRGAP3-213ENST00000618999 OCIAD2Q56VL3 154 aa5.6□□□□□ -1.51
SRGAP3-213ENST00000618999 SRSF12Q8WXF0 261 aaKnown RBP5.6□□□□□ -1.51
SRGAP3-213ENST00000618999 Q9H3A6 140 aa5.6□□□□□ -1.51
SRGAP3-213ENST00000618999 A0A087X0K7 114 aa5.6□□□□□ -1.51
SRGAP3-213ENST00000618999 A0A1B0GUT8 65 aa5.6□□□□□ -1.51
SRGAP3-213ENST00000618999 C7orf71A4D174 169 aa5.6□□□□□ -1.51
SRGAP3-213ENST00000618999 C19orf84I3L1E1 186 aa5.6□□□□□ -1.51
SRGAP3-213ENST00000618999 CD5LO43866 347 aa5.6□□□□□ -1.51
SRGAP3-213ENST00000618999 APELAP0DMC3 54 aa5.6□□□□□ -1.51
SRGAP3-213ENST00000618999 COL8A2P25067 703 aa5.6□□□□□ -1.51
SRGAP3-213ENST00000618999 C10orf55Q5SWW7 151 aa5.6□□□□□ -1.51
SRGAP3-213ENST00000618999 BVES-AS1Q5T3Y7 98 aa5.6□□□□□ -1.51
SRGAP3-213ENST00000618999 SLC25A48Q6ZT89 311 aaKnown RBP5.6□□□□□ -1.51
SRGAP3-213ENST00000618999 GOLT1AQ6ZVE7 132 aa5.6□□□□□ -1.51
SRGAP3-213ENST00000618999 FAM222BQ8WU58 562 aa5.6□□□□□ -1.51
SRGAP3-213ENST00000618999 ASCL2Q99929 193 aa5.6□□□□□ -1.51
SRGAP3-213ENST00000618999 C2orf70A6NJV1 201 aa5.59□□□□□ -1.51
SRGAP3-213ENST00000618999 RPL27AP46776 148 aaKnown RBP5.59□□□□□ -1.51
SRGAP3-213ENST00000618999 MORN5Q5VZ52 161 aa5.59□□□□□ -1.51
SRGAP3-213ENST00000618999 OR4A5Q8NH83 315 aa5.59□□□□□ -1.51
SRGAP3-213ENST00000618999 LINC00312Q9Y6C7 94 aa5.59□□□□□ -1.51
SRGAP3-213ENST00000618999 ARFGEF3Q5TH69 2177 aa5.59□□□□□ -1.51
SRGAP3-213ENST00000618999 DYSFO75923 2080 aa5.59□□□□□ -1.51
SRGAP3-213ENST00000618999 SRRM4A7MD48 611 aaKnown RBP5.59□□□□□ -1.51
SRGAP3-213ENST00000618999 NPIPB5A8MRT5 1133 aa5.59□□□□□ -1.51
SRGAP3-213ENST00000618999 SEC11AP67812 179 aa5.59□□□□□ -1.51
SRGAP3-213ENST00000618999 ZNF788Q6ZQV5 615 aa5.59□□□□□ -1.51
SRGAP3-213ENST00000618999 FAM167A-AS1Q96KT0 104 aa5.59□□□□□ -1.51
SRGAP3-213ENST00000618999 GAFA1Q96PS6 74 aa5.59□□□□□ -1.51
SRGAP3-213ENST00000618999 GAGE12BA1L429 117 aa5.59□□□□□ -1.52
SRGAP3-213ENST00000618999 F8W735 103 aaPredicted RBP5.59□□□□□ -1.52
SRGAP3-213ENST00000618999 CD24P25063 80 aa5.59□□□□□ -1.52
SRGAP3-213ENST00000618999 ZNF138P52744 262 aa5.59□□□□□ -1.52
SRGAP3-213ENST00000618999 DEFB125Q8N687 156 aa5.59□□□□□ -1.52
SRGAP3-213ENST00000618999 TMEM186Q96B77 213 aa5.59□□□□□ -1.52
SRGAP3-213ENST00000618999 RASL11BQ9BPW5 248 aa5.59□□□□□ -1.52
SRGAP3-213ENST00000618999 MCRIP2Q9BUT9 160 aaKnown RBP5.59□□□□□ -1.52
SRGAP3-213ENST00000618999 NDUFA4L2Q9NRX3 87 aa5.59□□□□□ -1.52
SRGAP3-213ENST00000618999 CFAP46Q8IYW2 2715 aa5.59□□□□□ -1.52
SRGAP3-213ENST00000618999 LOC389332A0A1B0GUA5 103 aa5.58□□□□□ -1.52
SRGAP3-213ENST00000618999 CNIH1O95406 144 aa5.58□□□□□ -1.52
SRGAP3-213ENST00000618999 TCRAP04437 139 aa5.58□□□□□ -1.52
SRGAP3-213ENST00000618999 TCTAP57738 103 aa5.58□□□□□ -1.52
SRGAP3-213ENST00000618999 SCGB2A2Q13296 93 aa5.58□□□□□ -1.52
SRGAP3-213ENST00000618999 CR1LQ2VPA4 569 aa5.58□□□□□ -1.52
SRGAP3-213ENST00000618999 SERTAD4-AS1Q5TG53 156 aa5.58□□□□□ -1.52
SRGAP3-213ENST00000618999 CCDC144NLQ6NUI1 221 aa5.58□□□□□ -1.52
SRGAP3-213ENST00000618999 FXYD5Q96DB9 178 aa5.58□□□□□ -1.52
SRGAP3-213ENST00000618999 TIMD4Q96H15 378 aa5.58□□□□□ -1.52
SRGAP3-213ENST00000618999 ZNRD1Q9P1U0 126 aa5.58□□□□□ -1.52
SRGAP3-213ENST00000618999 SMG1Q96Q15 3661 aaKnown RBP5.58□□□□□ -1.52
SRGAP3-213ENST00000618999 IGHV3-72A0A0B4J1Y9 119 aa5.58□□□□□ -1.52
SRGAP3-213ENST00000618999 PSG9Q00887 426 aa5.58□□□□□ -1.52
SRGAP3-213ENST00000618999 TMEM97Q5BJF2 176 aa5.58□□□□□ -1.52
SRGAP3-213ENST00000618999 GDF5OSQ5U4N7 250 aa5.58□□□□□ -1.52
SRGAP3-213ENST00000618999 LYPD2Q6UXB3 125 aa5.58□□□□□ -1.52
SRGAP3-213ENST00000618999 KIR3DL3Q8N743 410 aa5.58□□□□□ -1.52
SRGAP3-213ENST00000618999 TMEM167AQ8TBQ9 72 aa5.58□□□□□ -1.52
SRGAP3-213ENST00000618999 MBD6Q96DN6 1003 aa5.58□□□□□ -1.52
SRGAP3-213ENST00000618999 GFRA4Q9GZZ7 299 aa5.58□□□□□ -1.52
SRGAP3-213ENST00000618999 AAMDCQ9H7C9 122 aa5.58□□□□□ -1.52
SRGAP3-213ENST00000618999 CCL3L1P16619 93 aa5.58□□□□□ -1.52
SRGAP3-213ENST00000618999 NMUP48645 174 aa5.58□□□□□ -1.52
SRGAP3-213ENST00000618999 RPS20P60866 119 aaKnown RBP5.58□□□□□ -1.52
SRGAP3-213ENST00000618999 MALRD1Q5VYJ5 2156 aa5.58□□□□□ -1.52
SRGAP3-213ENST00000618999 TEX36Q5VZQ5 186 aa5.58□□□□□ -1.52
SRGAP3-213ENST00000618999 LHFPL4Q7Z7J7 247 aa5.58□□□□□ -1.52
SRGAP3-213ENST00000618999 OTORQ9NRC9 128 aa5.58□□□□□ -1.52
SRGAP3-213ENST00000618999 ZNF492Q9P255 531 aa5.58□□□□□ -1.52
SRGAP3-213ENST00000618999 LOC105371242A0A075B767 164 aa5.57□□□□□ -1.52
SRGAP3-213ENST00000618999 A1L4Q6 167 aa5.57□□□□□ -1.52
SRGAP3-213ENST00000618999 TAX1BP3O14907 124 aa5.57□□□□□ -1.52
SRGAP3-213ENST00000618999 LGALS7P47929 136 aa5.57□□□□□ -1.52
SRGAP3-213ENST00000618999 MEF2CQ06413 473 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms