RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 JPT1Q9UK76 154 aa0.85□□□□□ -2.27
TARDBP-220ENST00000618606 ICE1Q9Y2F5 2266 aa0.85□□□□□ -2.27
TARDBP-220ENST00000618606 ARHGEF10O15013 1369 aa0.84□□□□□ -2.27
TARDBP-220ENST00000618606 NUP210LQ5VU65 1888 aa0.84□□□□□ -2.27
TARDBP-220ENST00000618606 TRAPPC8Q9Y2L5 1435 aa0.84□□□□□ -2.27
TARDBP-220ENST00000618606 TRAV36DV7A0A075B6V5 113 aa0.84□□□□□ -2.27
TARDBP-220ENST00000618606 TRAV13-1A0A0B4J241 112 aa0.84□□□□□ -2.27
TARDBP-220ENST00000618606 ARL5CA6NH57 179 aa0.84□□□□□ -2.27
TARDBP-220ENST00000618606 E7EUB6 86 aa0.84□□□□□ -2.27
TARDBP-220ENST00000618606 C5orf67F2Z3F1 127 aa0.84□□□□□ -2.27
TARDBP-220ENST00000618606 H3BMG7 143 aa0.84□□□□□ -2.27
TARDBP-220ENST00000618606 MT-ND4LP03901 98 aa0.84□□□□□ -2.27
TARDBP-220ENST00000618606 IFNA4P05014 189 aa0.84□□□□□ -2.27
TARDBP-220ENST00000618606 OR10J4P0C629 311 aa0.84□□□□□ -2.27
TARDBP-220ENST00000618606 SCGB1A1P11684 91 aa0.84□□□□□ -2.27
TARDBP-220ENST00000618606 ZNF93P35789 620 aaPredicted RBP0.84□□□□□ -2.27
TARDBP-220ENST00000618606 RAB5CP51148 216 aa0.84□□□□□ -2.27
TARDBP-220ENST00000618606 FOXA3P55318 350 aaPredicted RBP0.84□□□□□ -2.27
TARDBP-220ENST00000618606 DSCR4P56555 118 aaPredicted RBP0.84□□□□□ -2.27
TARDBP-220ENST00000618606 RPS28P62857 69 aaKnown RBP0.84□□□□□ -2.27
TARDBP-220ENST00000618606 VMA21Q3ZAQ7 101 aa0.84□□□□□ -2.27
TARDBP-220ENST00000618606 TEX261Q6UWH6 196 aa0.84□□□□□ -2.27
TARDBP-220ENST00000618606 RPS19BP1Q86WX3 136 aaKnown RBP0.84□□□□□ -2.27
TARDBP-220ENST00000618606 OR5H6Q8NGV6 325 aa0.84□□□□□ -2.27
TARDBP-220ENST00000618606 ZNF563Q8TA94 476 aa0.84□□□□□ -2.27
TARDBP-220ENST00000618606 TMEM254Q8TBM7 123 aa0.84□□□□□ -2.27
TARDBP-220ENST00000618606 MAFIPQ8WZ33 124 aa0.84□□□□□ -2.27
TARDBP-220ENST00000618606 DIRC1Q969H9 104 aa0.84□□□□□ -2.27
TARDBP-220ENST00000618606 HYLS1Q96M11 299 aa0.84□□□□□ -2.27
TARDBP-220ENST00000618606 AIF1LQ9BQI0 150 aa0.84□□□□□ -2.27
TARDBP-220ENST00000618606 LXNQ9BS40 222 aa0.84□□□□□ -2.27
TARDBP-220ENST00000618606 TCEAL2Q9H3H9 227 aaPredicted RBP0.84□□□□□ -2.27
TARDBP-220ENST00000618606 FKBP11Q9NYL4 201 aa0.84□□□□□ -2.27
TARDBP-220ENST00000618606 GSKIPQ9P0R6 139 aa0.84□□□□□ -2.27
TARDBP-220ENST00000618606 U3KQ87 197 aa0.84□□□□□ -2.27
TARDBP-220ENST00000618606 SCN8AQ9UQD0 1980 aa0.84□□□□□ -2.28
TARDBP-220ENST00000618606 CACNA1GO43497 2377 aa0.84□□□□□ -2.28
TARDBP-220ENST00000618606 SBF1O95248 1867 aa0.84□□□□□ -2.28
TARDBP-220ENST00000618606 MYO5AQ9Y4I1 1855 aaKnown RBP0.84□□□□□ -2.28
TARDBP-220ENST00000618606 RTL9Q8NET4 1388 aa0.83□□□□□ -2.28
TARDBP-220ENST00000618606 FRMPD1Q5SYB0 1578 aa0.83□□□□□ -2.28
TARDBP-220ENST00000618606 NUP98P52948 1817 aa0.83□□□□□ -2.28
TARDBP-220ENST00000618606 TAF1LQ8IZX4 1826 aa0.83□□□□□ -2.28
TARDBP-220ENST00000618606 PRRC2BQ5JSZ5 2229 aaKnown RBP0.83□□□□□ -2.28
TARDBP-220ENST00000618606 TRAV10A0A0B4J240 114 aa0.83□□□□□ -2.28
TARDBP-220ENST00000618606 hDV103S1A0JD37 113 aa0.83□□□□□ -2.28
TARDBP-220ENST00000618606 C9orf170A2RU37 121 aa0.83□□□□□ -2.28
TARDBP-220ENST00000618606 C17orf112F2Z3M2 114 aa0.83□□□□□ -2.28
TARDBP-220ENST00000618606 TNFSF15O95150 251 aa0.83□□□□□ -2.28
TARDBP-220ENST00000618606 CMPK1P30085 196 aa0.83□□□□□ -2.28
TARDBP-220ENST00000618606 NDUFA6P56556 154 aa0.83□□□□□ -2.28
TARDBP-220ENST00000618606 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.83□□□□□ -2.28
TARDBP-220ENST00000618606 LRRC18Q8N456 261 aa0.83□□□□□ -2.28
TARDBP-220ENST00000618606 PRELID3AQ96N28 172 aa0.83□□□□□ -2.28
TARDBP-220ENST00000618606 RASL12Q9NYN1 266 aa0.83□□□□□ -2.28
TARDBP-220ENST00000618606 OVOS2A0A0G2JMS6 1433 aa0.82□□□□□ -2.28
TARDBP-220ENST00000618606 ARAP1Q96P48 1450 aa0.82□□□□□ -2.28
TARDBP-220ENST00000618606 TRBV7-6A0A0J9YX20 115 aa0.82□□□□□ -2.28
TARDBP-220ENST00000618606 TRBV27A0A0K0K1C4 114 aa0.82□□□□□ -2.28
TARDBP-220ENST00000618606 A0A1B0GX51 115 aa0.82□□□□□ -2.28
TARDBP-220ENST00000618606 ZNF736B4DX44 427 aaPredicted RBP0.82□□□□□ -2.28
TARDBP-220ENST00000618606 C9JAW5 83 aa0.82□□□□□ -2.28
TARDBP-220ENST00000618606 F8W036 122 aa0.82□□□□□ -2.28
TARDBP-220ENST00000618606 MRPS14O60783 128 aaKnown RBP0.82□□□□□ -2.28
TARDBP-220ENST00000618606 HYPMO75409 117 aa0.82□□□□□ -2.28
TARDBP-220ENST00000618606 ERC2-IT1O76042 136 aa0.82□□□□□ -2.28
TARDBP-220ENST00000618606 FABP4P15090 132 aa0.82□□□□□ -2.28
TARDBP-220ENST00000618606 CRYGSP22914 178 aa0.82□□□□□ -2.28
TARDBP-220ENST00000618606 CKS1BP61024 79 aa0.82□□□□□ -2.28
TARDBP-220ENST00000618606 PSG9Q00887 426 aa0.82□□□□□ -2.28
TARDBP-220ENST00000618606 TMEM244Q5VVB8 128 aa0.82□□□□□ -2.28
TARDBP-220ENST00000618606 ZNF833PQ6ZTB9 187 aa0.82□□□□□ -2.28
TARDBP-220ENST00000618606 OR8I2Q8N0Y5 310 aa0.82□□□□□ -2.28
TARDBP-220ENST00000618606 MORN4Q8NDC4 146 aa0.82□□□□□ -2.28
TARDBP-220ENST00000618606 CCL4L1Q8NHW4 92 aa0.82□□□□□ -2.28
TARDBP-220ENST00000618606 CLEC2BQ92478 149 aa0.82□□□□□ -2.28
TARDBP-220ENST00000618606 MUCL1Q96DR8 90 aa0.82□□□□□ -2.28
TARDBP-220ENST00000618606 TP53RKQ96S44 253 aa0.82□□□□□ -2.28
TARDBP-220ENST00000618606 NAA38Q9BRA0 125 aaKnown RBP0.82□□□□□ -2.28
TARDBP-220ENST00000618606 CDC42SE1Q9NRR8 79 aa0.82□□□□□ -2.28
TARDBP-220ENST00000618606 KLK9Q9UKQ9 250 aa0.82□□□□□ -2.28
TARDBP-220ENST00000618606 HIGD1AQ9Y241 93 aa0.82□□□□□ -2.28
TARDBP-220ENST00000618606 TPRKBQ9Y3C4 175 aa0.82□□□□□ -2.28
TARDBP-220ENST00000618606 MICAL3Q7RTP6 2002 aa0.82□□□□□ -2.28
TARDBP-220ENST00000618606 ZCCHC11Q5TAX3 1644 aaKnown RBP0.82□□□□□ -2.28
TARDBP-220ENST00000618606 ADGBQ8N7X0 1667 aa0.81□□□□□ -2.28
TARDBP-220ENST00000618606 FHAD1B1AJZ9 1412 aa0.81□□□□□ -2.28
TARDBP-220ENST00000618606 FAM135BQ49AJ0 1406 aa0.81□□□□□ -2.28
TARDBP-220ENST00000618606 A2MP01023 1474 aa0.81□□□□□ -2.28
TARDBP-220ENST00000618606 NCAPD3P42695 1498 aa0.81□□□□□ -2.28
TARDBP-220ENST00000618606 UBR2Q8IWV8 1755 aa0.81□□□□□ -2.28
TARDBP-220ENST00000618606 MDC1Q14676 2089 aaKnown RBP0.81□□□□□ -2.28
TARDBP-220ENST00000618606 FN1P02751 2386 aaKnown RBP0.81□□□□□ -2.28
TARDBP-220ENST00000618606 A0A087WSZ3 146 aa0.81□□□□□ -2.28
TARDBP-220ENST00000618606 TRAV27A0A087WT01 109 aa0.81□□□□□ -2.28
TARDBP-220ENST00000618606 LOC107984156A0A0G2JMH3 177 aa0.81□□□□□ -2.28
TARDBP-220ENST00000618606 TMEM189A5PLL7 270 aa0.81□□□□□ -2.28
TARDBP-220ENST00000618606 C5orf58C9J3I9 102 aa0.81□□□□□ -2.28
TARDBP-220ENST00000618606 CCL16O15467 120 aa0.81□□□□□ -2.28
TARDBP-220ENST00000618606 HCRTO43612 131 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms