RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 PPIAL4GP0DN37 164 aa16.07■□□□□ 0.16
NEK3-208ENST00000618534 ARF6P62330 175 aa16.07■□□□□ 0.16
NEK3-208ENST00000618534 C12orf54Q6X4T0 127 aa16.07■□□□□ 0.16
NEK3-208ENST00000618534 PRSS3P2Q8NHM4 247 aa16.07■□□□□ 0.16
NEK3-208ENST00000618534 RNF125Q96EQ8 232 aa16.07■□□□□ 0.16
NEK3-208ENST00000618534 APC2O95996 2303 aa16.07■□□□□ 0.16
NEK3-208ENST00000618534 OR2T8A6NH00 312 aa16.07■□□□□ 0.16
NEK3-208ENST00000618534 MRPS12O15235 138 aaKnown RBP16.07■□□□□ 0.16
NEK3-208ENST00000618534 FAM106CPP0CH98 169 aa16.07■□□□□ 0.16
NEK3-208ENST00000618534 FAM106AQ4KMX7 169 aa16.07■□□□□ 0.16
NEK3-208ENST00000618534 LDLRAD2Q5SZI1 272 aa16.07■□□□□ 0.16
NEK3-208ENST00000618534 ZNF414Q96IQ9 312 aa16.07■□□□□ 0.16
NEK3-208ENST00000618534 RNF24Q9Y225 148 aa16.07■□□□□ 0.16
NEK3-208ENST00000618534 TIMM23O14925 209 aa16.06■□□□□ 0.16
NEK3-208ENST00000618534 FCGR2BP31994 310 aaPredicted RBP16.06■□□□□ 0.16
NEK3-208ENST00000618534 FOXE3Q13461 319 aa16.06■□□□□ 0.16
NEK3-208ENST00000618534 BCL6BQ8N143 479 aaPredicted RBP16.06■□□□□ 0.16
NEK3-208ENST00000618534 CBY3A6NI87 242 aa16.06■□□□□ 0.16
NEK3-208ENST00000618534 LY6LH3BQJ8 138 aa16.06■□□□□ 0.16
NEK3-208ENST00000618534 LYPD1Q8N2G4 141 aa16.06■□□□□ 0.16
NEK3-208ENST00000618534 OR10AG1Q8NH19 301 aa16.06■□□□□ 0.16
NEK3-208ENST00000618534 IGFBPL1Q8WX77 278 aa16.06■□□□□ 0.16
NEK3-208ENST00000618534 TACC2O95359 2948 aa16.05■□□□□ 0.16
NEK3-208ENST00000618534 TPRP12270 2363 aaKnown RBP16.05■□□□□ 0.16
NEK3-208ENST00000618534 A0A1B0GW15 77 aa16.05■□□□□ 0.16
NEK3-208ENST00000618534 APOBEC3AP31941 199 aaPredicted RBP16.05■□□□□ 0.16
NEK3-208ENST00000618534 RHOGP84095 191 aa16.05■□□□□ 0.16
NEK3-208ENST00000618534 HIST1H1AQ02539 215 aaPredicted RBP16.05■□□□□ 0.16
NEK3-208ENST00000618534 KLF17Q5JT82 389 aaPredicted RBP16.05■□□□□ 0.16
NEK3-208ENST00000618534 ABHD17AQ96GS6 310 aa16.05■□□□□ 0.16
NEK3-208ENST00000618534 GVINP1Q7Z2Y8 2422 aa16.05■□□□□ 0.16
NEK3-208ENST00000618534 IFI27P40305 119 aaPredicted RBP16.05■□□□□ 0.16
NEK3-208ENST00000618534 CSN1S1P47710 185 aa16.05■□□□□ 0.16
NEK3-208ENST00000618534 LOXL1Q08397 574 aaPredicted RBP16.05■□□□□ 0.16
NEK3-208ENST00000618534 SRSF8Q9BRL6 282 aaKnown RBP16.05■□□□□ 0.16
NEK3-208ENST00000618534 ACACAQ13085 2346 aa16.05■□□□□ 0.16
NEK3-208ENST00000618534 POLEQ07864 2286 aa16.04■□□□□ 0.16
NEK3-208ENST00000618534 TMSB15BA0A087X1C1 80 aa16.04■□□□□ 0.16
NEK3-208ENST00000618534 Q6AWC8 147 aa16.04■□□□□ 0.16
NEK3-208ENST00000618534 Q8NA96 180 aa16.04■□□□□ 0.16
NEK3-208ENST00000618534 PIEZO2Q9H5I5 2752 aa16.04■□□□□ 0.16
NEK3-208ENST00000618534 A0A096LNJ9 63 aa16.04■□□□□ 0.16
NEK3-208ENST00000618534 SNAI2O43623 268 aa16.04■□□□□ 0.16
NEK3-208ENST00000618534 COX8AP10176 69 aa16.04■□□□□ 0.16
NEK3-208ENST00000618534 C2orf91Q6ZV80 131 aa16.04■□□□□ 0.16
NEK3-208ENST00000618534 TMEM190Q8WZ59 177 aa16.04■□□□□ 0.16
NEK3-208ENST00000618534 RNF5Q99942 180 aa16.04■□□□□ 0.16
NEK3-208ENST00000618534 LOC389332A0A1B0GUA5 103 aa16.03■□□□□ 0.16
NEK3-208ENST00000618534 SERTM2A0A1B0GWG4 89 aa16.03■□□□□ 0.16
NEK3-208ENST00000618534 B9A039 149 aa16.03■□□□□ 0.16
NEK3-208ENST00000618534 D6R8Y8 96 aa16.03■□□□□ 0.16
NEK3-208ENST00000618534 GPR183P32249 361 aa16.03■□□□□ 0.16
NEK3-208ENST00000618534 ONECUT1Q9UBC0 465 aa16.03■□□□□ 0.16
NEK3-208ENST00000618534 WI2-2373I1.2A0A1W2PRP0 233 aa16.03■□□□□ 0.16
NEK3-208ENST00000618534 TMEM213A2RRL7 107 aa16.03■□□□□ 0.16
NEK3-208ENST00000618534 CT45A10P0DMU9 189 aa16.03■□□□□ 0.16
NEK3-208ENST00000618534 LYZL1Q6UWQ5 148 aa16.03■□□□□ 0.16
NEK3-208ENST00000618534 ZNF493Q6ZR52 646 aa16.03■□□□□ 0.16
NEK3-208ENST00000618534 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.02■□□□□ 0.15
NEK3-208ENST00000618534 OR8A1Q8NGG7 326 aa16.02■□□□□ 0.15
NEK3-208ENST00000618534 SIGLEC8Q9NYZ4 499 aa16.02■□□□□ 0.15
NEK3-208ENST00000618534 PRR30Q53SZ7 412 aaPredicted RBP16.01■□□□□ 0.15
NEK3-208ENST00000618534 AMMECR1LQ6DCA0 310 aa16.01■□□□□ 0.15
NEK3-208ENST00000618534 AMN1Q8IY45 258 aa16.01■□□□□ 0.15
NEK3-208ENST00000618534 HILPDAQ9Y5L2 63 aa16.01■□□□□ 0.15
NEK3-208ENST00000618534 ZNF292O60281 2723 aa16.01■□□□□ 0.15
NEK3-208ENST00000618534 NBR2O15453 112 aa16■□□□□ 0.15
NEK3-208ENST00000618534 CD5LO43866 347 aa16■□□□□ 0.15
NEK3-208ENST00000618534 GNG7O60262 68 aa16■□□□□ 0.15
NEK3-208ENST00000618534 CDKN1BP46527 198 aa16■□□□□ 0.15
NEK3-208ENST00000618534 PIP4P2Q8N4L2 257 aa16■□□□□ 0.15
NEK3-208ENST00000618534 ZNF318Q5VUA4 2279 aa16■□□□□ 0.15
NEK3-208ENST00000618534 A0A1W2PRD5 423 aa16■□□□□ 0.15
NEK3-208ENST00000618534 A0A1W2PRF3 423 aa16■□□□□ 0.15
NEK3-208ENST00000618534 A0A1W2PRM7 423 aa16■□□□□ 0.15
NEK3-208ENST00000618534 SH2D1AO60880 128 aa16■□□□□ 0.15
NEK3-208ENST00000618534 CD3EP07766 207 aa16■□□□□ 0.15
NEK3-208ENST00000618534 AAMDCQ9H7C9 122 aa16■□□□□ 0.15
NEK3-208ENST00000618534 TMEM189A5PLL7 270 aa15.99■□□□□ 0.15
NEK3-208ENST00000618534 PRELID3AQ96N28 172 aa15.99■□□□□ 0.15
NEK3-208ENST00000618534 PSG9Q00887 426 aa15.99■□□□□ 0.15
NEK3-208ENST00000618534 ANKRD39Q53RE8 183 aa15.99■□□□□ 0.15
NEK3-208ENST00000618534 FAM104BQ5XKR9 115 aa15.99■□□□□ 0.15
NEK3-208ENST00000618534 U3KQK5 164 aa15.99■□□□□ 0.15
NEK3-208ENST00000618534 FXYD7P58549 80 aa15.98■□□□□ 0.15
NEK3-208ENST00000618534 RAB1BQ9H0U4 201 aa15.98■□□□□ 0.15
NEK3-208ENST00000618534 IGKV2-40A0A087WW87 121 aaPredicted RBP15.98■□□□□ 0.15
NEK3-208ENST00000618534 IGKV2D-40P01614 121 aaPredicted RBP15.98■□□□□ 0.15
NEK3-208ENST00000618534 PDE6HQ13956 83 aa15.98■□□□□ 0.15
NEK3-208ENST00000618534 RNF151Q2KHN1 245 aa15.98■□□□□ 0.15
NEK3-208ENST00000618534 CFHR4Q92496 578 aa15.98■□□□□ 0.15
NEK3-208ENST00000618534 TRAV8-6A0A0B4J262 113 aa15.97■□□□□ 0.15
NEK3-208ENST00000618534 FGF6P10767 208 aa15.97■□□□□ 0.15
NEK3-208ENST00000618534 ORMDL3Q8N138 153 aa15.97■□□□□ 0.15
NEK3-208ENST00000618534 FANCD2OSQ96PS1 177 aa15.97■□□□□ 0.15
NEK3-208ENST00000618534 MRPL51Q4U2R6 128 aaKnown RBP15.96■□□□□ 0.15
NEK3-208ENST00000618534 DPM3Q9P2X0 92 aa15.96■□□□□ 0.15
NEK3-208ENST00000618534 ARHGAP32A7KAX9 2087 aa15.96■□□□□ 0.15
NEK3-208ENST00000618534 F8W735 103 aaPredicted RBP15.96■□□□□ 0.15
NEK3-208ENST00000618534 NDUFA3O95167 84 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms