RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 TMPRSS5Q9H3S3 457 aa3.43□□□□□ -1.86
SYCP1-210ENST00000618516 ZMAT4Q9H898 229 aa3.43□□□□□ -1.86
SYCP1-210ENST00000618516 SLC39A9Q9NUM3 307 aa3.43□□□□□ -1.86
SYCP1-210ENST00000618516 H3BQ15 152 aa3.42□□□□□ -1.86
SYCP1-210ENST00000618516 H2AFB1P0C5Y9 115 aa3.42□□□□□ -1.86
SYCP1-210ENST00000618516 GALR1P47211 349 aa3.42□□□□□ -1.86
SYCP1-210ENST00000618516 UBE2L3P68036 154 aaKnown RBP3.42□□□□□ -1.86
SYCP1-210ENST00000618516 SMUG1Q53HV7 270 aa3.42□□□□□ -1.86
SYCP1-210ENST00000618516 TMED6Q8WW62 240 aa3.42□□□□□ -1.86
SYCP1-210ENST00000618516 NMES1Q9C002 83 aa3.42□□□□□ -1.86
SYCP1-210ENST00000618516 IGKV2-40A0A087WW87 121 aaPredicted RBP3.42□□□□□ -1.86
SYCP1-210ENST00000618516 TRAV8-1A0A0A6YYK1 113 aa3.42□□□□□ -1.86
SYCP1-210ENST00000618516 HMSDA8MTL9 139 aa3.42□□□□□ -1.86
SYCP1-210ENST00000618516 PRAC2D3DTV9 90 aa3.42□□□□□ -1.86
SYCP1-210ENST00000618516 IGKV2D-40P01614 121 aaPredicted RBP3.42□□□□□ -1.86
SYCP1-210ENST00000618516 FABP1P07148 127 aa3.42□□□□□ -1.86
SYCP1-210ENST00000618516 ICAM4Q14773 271 aa3.42□□□□□ -1.86
SYCP1-210ENST00000618516 Q6ZQT7 251 aa3.42□□□□□ -1.86
SYCP1-210ENST00000618516 OR2G3Q8NGZ4 309 aa3.42□□□□□ -1.86
SYCP1-210ENST00000618516 C20orf173Q96LM9 149 aa3.42□□□□□ -1.86
SYCP1-210ENST00000618516 DNAJC4Q9NNZ3 241 aa3.42□□□□□ -1.86
SYCP1-210ENST00000618516 TECRQ9NZ01 308 aaKnown RBP3.42□□□□□ -1.86
SYCP1-210ENST00000618516 ZNF580Q9UK33 172 aa3.42□□□□□ -1.86
SYCP1-210ENST00000618516 HSPB11Q9Y547 144 aa3.42□□□□□ -1.86
SYCP1-210ENST00000618516 TIMM9Q9Y5J7 89 aa3.42□□□□□ -1.86
SYCP1-210ENST00000618516 LOC102724200A0A096LPH7 203 aaPredicted RBP3.41□□□□□ -1.86
SYCP1-210ENST00000618516 PRSS46E5RG02 174 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 CRYBB3P26998 211 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 ATP6V0CP27449 155 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 GPX4P36969 197 aaPredicted RBP3.41□□□□□ -1.86
SYCP1-210ENST00000618516 GNG5P63218 68 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 MUC21Q5SSG8 566 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 PVRIGQ6DKI7 326 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 OR11H2Q8NH07 326 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 FAM213BQ8TBF2 198 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 SPAG8Q99932 426 aaPredicted RBP3.41□□□□□ -1.86
SYCP1-210ENST00000618516 KLK9Q9UKQ9 250 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 PRELID1Q9Y255 219 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 FRAS1Q86XX4 4008 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 PIGBOS1A0A0B4J2F0 54 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 A0A0J9YWU9 116 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 A8MWP6 167 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 GIPP09681 153 aaPredicted RBP3.41□□□□□ -1.86
SYCP1-210ENST00000618516 DEFB130BP0DP73 79 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 DEFB130AP0DP74 79 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 YPEL3P61236 119 aaPredicted RBP3.41□□□□□ -1.86
SYCP1-210ENST00000618516 TOR2AQ5JU69 321 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 CST9LP1Q5W188 147 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 EBLN2Q6P2I7 272 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 REC114Q7Z4M0 266 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 ZNF680Q8NEM1 530 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 OR10G4Q8NGN3 311 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 OR10G9Q8NGN4 311 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 OR10G7Q8NGN6 311 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 GATAD1Q8WUU5 269 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 TRGV9Q99603 122 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 TXN2Q99757 166 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 ATP5SQ99766 215 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 RARRES2Q99969 163 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 GPR61Q9BZJ8 451 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 TMEM231Q9H6L2 316 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 TRAV34A0A0B4J273 112 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 LGALS9O00182 355 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 BMI1P35226 326 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 CNN1P51911 297 aaKnown RBP3.41□□□□□ -1.86
SYCP1-210ENST00000618516 DLK1P80370 383 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 EGFEM1PQ0D2K5 195 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 UQCC3Q6UW78 93 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 BPIFA4PQ86YQ2 179 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 NHLRC2Q8NBF2 726 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 RPUSD4Q96CM3 377 aaKnown RBP3.41□□□□□ -1.86
SYCP1-210ENST00000618516 PHYHIPLQ96FC7 376 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 WDR61Q9GZS3 305 aaKnown RBP3.41□□□□□ -1.86
SYCP1-210ENST00000618516 PFDN2Q9UHV9 154 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 SLC45A2Q9UMX9 530 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 WDR83OSQ9Y284 106 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 LSM4Q9Y4Z0 139 aaKnown RBP3.41□□□□□ -1.86
SYCP1-210ENST00000618516 U3KQK5 164 aa3.41□□□□□ -1.86
SYCP1-210ENST00000618516 TRAV12-3A0A0B4J271 114 aa3.4□□□□□ -1.86
SYCP1-210ENST00000618516 KANTRA0A1W2PQU2 76 aa3.4□□□□□ -1.86
SYCP1-210ENST00000618516 ARL14EPLP0DKL9 152 aa3.4□□□□□ -1.86
SYCP1-210ENST00000618516 FLI1Q01543 452 aaPredicted RBP3.4□□□□□ -1.86
SYCP1-210ENST00000618516 IL15RAQ13261 267 aa3.4□□□□□ -1.86
SYCP1-210ENST00000618516 AKR1C8PQ5T2L2 129 aa3.4□□□□□ -1.86
SYCP1-210ENST00000618516 C16orf54Q6UWD8 224 aa3.4□□□□□ -1.86
SYCP1-210ENST00000618516 ALKAL2Q6UX46 152 aa3.4□□□□□ -1.86
SYCP1-210ENST00000618516 SSX7Q7RTT5 188 aa3.4□□□□□ -1.86
SYCP1-210ENST00000618516 RPP25LQ8N5L8 163 aaKnown RBP3.4□□□□□ -1.86
SYCP1-210ENST00000618516 DCANP1Q8TF63 244 aa3.4□□□□□ -1.86
SYCP1-210ENST00000618516 SFT2D1Q8WV19 159 aa3.4□□□□□ -1.86
SYCP1-210ENST00000618516 MARC2Q969Z3 335 aa3.4□□□□□ -1.86
SYCP1-210ENST00000618516 LINC00477Q96M19 166 aa3.4□□□□□ -1.86
SYCP1-210ENST00000618516 CSTL1Q9H114 145 aa3.4□□□□□ -1.86
SYCP1-210ENST00000618516 MUC21A0A0G2JKD1 596 aa3.4□□□□□ -1.87
SYCP1-210ENST00000618516 MUC21A0A140T8X8 626 aa3.4□□□□□ -1.87
SYCP1-210ENST00000618516 RNF222A6NCQ9 220 aa3.4□□□□□ -1.87
SYCP1-210ENST00000618516 ZNF705GA8MUZ8 300 aaPredicted RBP3.4□□□□□ -1.87
SYCP1-210ENST00000618516 F6UZH7 168 aa3.4□□□□□ -1.87
SYCP1-210ENST00000618516 RPL7P18124 248 aaKnown RBP3.4□□□□□ -1.87
SYCP1-210ENST00000618516 CXCL2P19875 107 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms