RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 AURKAIP1Q9NWT8 199 aaPredicted RBP16.9■□□□□ 0.3
CBWD3-213ENST00000618217 UMAD1C9J7I0 102 aa16.89■□□□□ 0.29
CBWD3-213ENST00000618217 SULT1A2P50226 295 aa16.89■□□□□ 0.29
CBWD3-213ENST00000618217 ODF3L2Q3SX64 289 aa16.89■□□□□ 0.29
CBWD3-213ENST00000618217 LRRC20Q8TCA0 184 aa16.89■□□□□ 0.29
CBWD3-213ENST00000618217 SNRPCP09234 159 aaKnown RBP16.88■□□□□ 0.29
CBWD3-213ENST00000618217 MEOX2P50222 304 aa16.88■□□□□ 0.29
CBWD3-213ENST00000618217 CD81P60033 236 aa16.88■□□□□ 0.29
CBWD3-213ENST00000618217 GTSCR1Q86UQ5 136 aa16.88■□□□□ 0.29
CBWD3-213ENST00000618217 FXYD5Q96DB9 178 aa16.88■□□□□ 0.29
CBWD3-213ENST00000618217 FAM110AQ9BQ89 295 aa16.88■□□□□ 0.29
CBWD3-213ENST00000618217 ACTR3CQ9C0K3 210 aaPredicted RBP16.88■□□□□ 0.29
CBWD3-213ENST00000618217 OR51M1Q9H341 326 aa16.88■□□□□ 0.29
CBWD3-213ENST00000618217 ZNF586Q9NXT0 402 aa16.88■□□□□ 0.29
CBWD3-213ENST00000618217 LINC00862A6NCI5 91 aa16.88■□□□□ 0.29
CBWD3-213ENST00000618217 ZNF705EA8MWA4 302 aaPredicted RBP16.88■□□□□ 0.29
CBWD3-213ENST00000618217 STAG3L2P0CL84 134 aa16.88■□□□□ 0.29
CBWD3-213ENST00000618217 STAG3L3P0CL85 134 aa16.88■□□□□ 0.29
CBWD3-213ENST00000618217 HIST1H1EP10412 219 aaKnown RBP16.88■□□□□ 0.29
CBWD3-213ENST00000618217 TAS2R45P59539 299 aa16.88■□□□□ 0.29
CBWD3-213ENST00000618217 KHDC3LQ587J8 217 aa16.88■□□□□ 0.29
CBWD3-213ENST00000618217 SAT2Q96F10 170 aaPredicted RBP16.88■□□□□ 0.29
CBWD3-213ENST00000618217 PAXXQ9BUH6 204 aa16.88■□□□□ 0.29
CBWD3-213ENST00000618217 MEGF8Q7Z7M0 2845 aa16.87■□□□□ 0.29
CBWD3-213ENST00000618217 ISLRO14498 428 aa16.87■□□□□ 0.29
CBWD3-213ENST00000618217 HMGB3O15347 200 aaKnown RBP16.87■□□□□ 0.29
CBWD3-213ENST00000618217 FHITP49789 147 aa16.87■□□□□ 0.29
CBWD3-213ENST00000618217 TRAV8-2A0A0B4J237 113 aa16.86■□□□□ 0.29
CBWD3-213ENST00000618217 OR7C2O60412 319 aa16.86■□□□□ 0.29
CBWD3-213ENST00000618217 GUK1Q16774 197 aa16.86■□□□□ 0.29
CBWD3-213ENST00000618217 MAP6D1Q9H9H5 199 aa16.86■□□□□ 0.29
CBWD3-213ENST00000618217 TRBV19A0A075B6N1 114 aa16.85■□□□□ 0.29
CBWD3-213ENST00000618217 CTXND1A0A1B0GTU2 59 aa16.85■□□□□ 0.29
CBWD3-213ENST00000618217 H3BTX0 84 aa16.85■□□□□ 0.29
CBWD3-213ENST00000618217 K7EIL1 84 aa16.85■□□□□ 0.29
CBWD3-213ENST00000618217 OR10J4P0C629 311 aa16.85■□□□□ 0.29
CBWD3-213ENST00000618217 ZNF688P0C7X2 276 aa16.85■□□□□ 0.29
CBWD3-213ENST00000618217 SAMD13Q5VXD3 122 aa16.85■□□□□ 0.29
CBWD3-213ENST00000618217 PQLC2Q6ZP29 291 aa16.85■□□□□ 0.29
CBWD3-213ENST00000618217 COMMD7Q86VX2 200 aa16.85■□□□□ 0.29
CBWD3-213ENST00000618217 SLC17A3O00476 420 aa16.85■□□□□ 0.29
CBWD3-213ENST00000618217 NDUFB4O95168 129 aa16.85■□□□□ 0.29
CBWD3-213ENST00000618217 ARL14EPLP0DKL9 152 aa16.85■□□□□ 0.29
CBWD3-213ENST00000618217 PSMB3P49720 205 aa16.85■□□□□ 0.29
CBWD3-213ENST00000618217 LCN15Q6UWW0 184 aa16.85■□□□□ 0.29
CBWD3-213ENST00000618217 DPPA3Q6W0C5 159 aa16.85■□□□□ 0.29
CBWD3-213ENST00000618217 WFDC10AQ9H1F0 79 aa16.85■□□□□ 0.29
CBWD3-213ENST00000618217 ZNF331Q9NQX6 463 aaPredicted RBP16.85■□□□□ 0.29
CBWD3-213ENST00000618217 NBEAP1P0C6P0 100 aa16.84■□□□□ 0.29
CBWD3-213ENST00000618217 CMC4P56277 68 aaPredicted RBP16.84■□□□□ 0.29
CBWD3-213ENST00000618217 C16orf92Q96LL3 132 aa16.84■□□□□ 0.29
CBWD3-213ENST00000618217 OR11H12B2RN74 326 aa16.83■□□□□ 0.28
CBWD3-213ENST00000618217 TEX46H3BTG2 121 aa16.83■□□□□ 0.28
CBWD3-213ENST00000618217 ZNF253O75346 499 aa16.83■□□□□ 0.28
CBWD3-213ENST00000618217 ID1P41134 155 aa16.83■□□□□ 0.28
CBWD3-213ENST00000618217 RAB5CP51148 216 aa16.83■□□□□ 0.28
CBWD3-213ENST00000618217 DEFB131AP59861 70 aa16.83■□□□□ 0.28
CBWD3-213ENST00000618217 SNRPD3P62318 126 aaKnown RBP16.83■□□□□ 0.28
CBWD3-213ENST00000618217 IGFL4Q6B9Z1 124 aa16.83■□□□□ 0.28
CBWD3-213ENST00000618217 C20orf173Q96LM9 149 aa16.83■□□□□ 0.28
CBWD3-213ENST00000618217 UBE2L3P68036 154 aaKnown RBP16.82■□□□□ 0.28
CBWD3-213ENST00000618217 PDE6HQ13956 83 aa16.82■□□□□ 0.28
CBWD3-213ENST00000618217 FAM213BQ8TBF2 198 aa16.82■□□□□ 0.28
CBWD3-213ENST00000618217 SUN5Q8TC36 379 aa16.82■□□□□ 0.28
CBWD3-213ENST00000618217 SLC50A1Q9BRV3 221 aa16.82■□□□□ 0.28
CBWD3-213ENST00000618217 CXorf1O96002 111 aa16.81■□□□□ 0.28
CBWD3-213ENST00000618217 BLOC1S1P78537 153 aa16.81■□□□□ 0.28
CBWD3-213ENST00000618217 ZNF124Q15973 351 aa16.81■□□□□ 0.28
CBWD3-213ENST00000618217 PSMG4Q5JS54 123 aa16.81■□□□□ 0.28
CBWD3-213ENST00000618217 APRG1Q8IVJ8 170 aa16.81■□□□□ 0.28
CBWD3-213ENST00000618217 DEFB125Q8N687 156 aa16.81■□□□□ 0.28
CBWD3-213ENST00000618217 RNF182Q8N6D2 247 aa16.81■□□□□ 0.28
CBWD3-213ENST00000618217 BLNKQ8WV28 456 aa16.81■□□□□ 0.28
CBWD3-213ENST00000618217 MBD3L1Q8WWY6 194 aa16.81■□□□□ 0.28
CBWD3-213ENST00000618217 CITED4Q96RK1 184 aa16.81■□□□□ 0.28
CBWD3-213ENST00000618217 AGRNO00468 2067 aa16.81■□□□□ 0.28
CBWD3-213ENST00000618217 HLA-DMBP28068 263 aa16.81■□□□□ 0.28
CBWD3-213ENST00000618217 GCHFRP30047 84 aa16.81■□□□□ 0.28
CBWD3-213ENST00000618217 FBN3Q75N90 2809 aa16.81■□□□□ 0.28
CBWD3-213ENST00000618217 MED9Q9NWA0 146 aa16.81■□□□□ 0.28
CBWD3-213ENST00000618217 MAP1LC3B2A6NCE7 125 aa16.8■□□□□ 0.28
CBWD3-213ENST00000618217 LINC00052Q96N35 136 aa16.8■□□□□ 0.28
CBWD3-213ENST00000618217 MAP1LC3BQ9GZQ8 125 aa16.8■□□□□ 0.28
CBWD3-213ENST00000618217 DEFA6Q01524 100 aa16.79■□□□□ 0.28
CBWD3-213ENST00000618217 A8MZ25 164 aa16.78■□□□□ 0.28
CBWD3-213ENST00000618217 IGHV4-30-4P0DP06 118 aa16.78■□□□□ 0.28
CBWD3-213ENST00000618217 FGF8P55075 233 aaPredicted RBP16.78■□□□□ 0.28
CBWD3-213ENST00000618217 PSG3Q16557 428 aa16.78■□□□□ 0.28
CBWD3-213ENST00000618217 PSG9Q00887 426 aa16.78■□□□□ 0.28
CBWD3-213ENST00000618217 SFT2D1Q8WV19 159 aa16.78■□□□□ 0.28
CBWD3-213ENST00000618217 TMPRSS5Q9H3S3 457 aa16.78■□□□□ 0.28
CBWD3-213ENST00000618217 DEFB1P60022 68 aa16.77■□□□□ 0.27
CBWD3-213ENST00000618217 CLEC5AQ9NY25 188 aa16.77■□□□□ 0.27
CBWD3-213ENST00000618217 H2AFB1P0C5Y9 115 aa16.76■□□□□ 0.27
CBWD3-213ENST00000618217 LYPD1Q8N2G4 141 aa16.76■□□□□ 0.27
CBWD3-213ENST00000618217 EXOC3-AS1Q8N2X6 119 aa16.76■□□□□ 0.27
CBWD3-213ENST00000618217 SRD5A3Q9H8P0 318 aa16.76■□□□□ 0.27
CBWD3-213ENST00000618217 TMEM167BQ9NRX6 74 aa16.76■□□□□ 0.27
CBWD3-213ENST00000618217 TRAV1-1A0A0B4J248 108 aa16.75■□□□□ 0.27
CBWD3-213ENST00000618217 RANP62826 216 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms