RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 NPFFO15130 113 aa9.73□□□□□ -0.85
CIITA-212ENST00000618207 TCRAP04437 139 aa9.73□□□□□ -0.85
CIITA-212ENST00000618207 CAMPP49913 170 aa9.73□□□□□ -0.85
CIITA-212ENST00000618207 PLP1P60201 277 aa9.73□□□□□ -0.85
CIITA-212ENST00000618207 IGFL4Q6B9Z1 124 aa9.73□□□□□ -0.85
CIITA-212ENST00000618207 CIARTQ8N365 385 aaPredicted RBP9.73□□□□□ -0.85
CIITA-212ENST00000618207 C5orf17Q8NAS9 161 aa9.73□□□□□ -0.85
CIITA-212ENST00000618207 CHRDL1Q9BU40 450 aa9.73□□□□□ -0.85
CIITA-212ENST00000618207 AMY1AP04745 511 aa9.73□□□□□ -0.85
CIITA-212ENST00000618207 BRS3P32247 399 aa9.73□□□□□ -0.85
CIITA-212ENST00000618207 GPR183P32249 361 aa9.73□□□□□ -0.85
CIITA-212ENST00000618207 LY6EQ16553 131 aa9.73□□□□□ -0.85
CIITA-212ENST00000618207 TCF24Q7RTU0 167 aa9.73□□□□□ -0.85
CIITA-212ENST00000618207 BPIFA4PQ86YQ2 179 aa9.73□□□□□ -0.85
CIITA-212ENST00000618207 ALKBH7Q9BT30 221 aaPredicted RBP9.73□□□□□ -0.85
CIITA-212ENST00000618207 GNB4Q9HAV0 340 aa9.73□□□□□ -0.85
CIITA-212ENST00000618207 IGHV4-30-2A0A087WSY4 118 aa9.72□□□□□ -0.85
CIITA-212ENST00000618207 F8W735 103 aaPredicted RBP9.72□□□□□ -0.85
CIITA-212ENST00000618207 HIST1H1EP10412 219 aaKnown RBP9.72□□□□□ -0.85
CIITA-212ENST00000618207 CRISP2P16562 243 aa9.72□□□□□ -0.85
CIITA-212ENST00000618207 TMEM183BQ1AE95 376 aa9.72□□□□□ -0.85
CIITA-212ENST00000618207 OR4F17Q8NGA8 305 aa9.72□□□□□ -0.85
CIITA-212ENST00000618207 IGHV3-49A0A0A0MS15 119 aa9.72□□□□□ -0.85
CIITA-212ENST00000618207 IGHV3-66A0A0C4DH42 116 aa9.72□□□□□ -0.85
CIITA-212ENST00000618207 YPEL3P61236 119 aaPredicted RBP9.72□□□□□ -0.85
CIITA-212ENST00000618207 ODF1Q14990 250 aa9.72□□□□□ -0.85
CIITA-212ENST00000618207 C15orf32Q32M92 178 aa9.72□□□□□ -0.85
CIITA-212ENST00000618207 GPR82Q96P67 336 aa9.72□□□□□ -0.85
CIITA-212ENST00000618207 SRSF8Q9BRL6 282 aaKnown RBP9.72□□□□□ -0.85
CIITA-212ENST00000618207 SHANK2-AS3Q9BTD1 123 aa9.72□□□□□ -0.85
CIITA-212ENST00000618207 SSBP4Q9BWG4 385 aaPredicted RBP9.72□□□□□ -0.85
CIITA-212ENST00000618207 C1RLQ9NZP8 487 aa9.72□□□□□ -0.85
CIITA-212ENST00000618207 NPIPB5A8MRT5 1133 aa9.71□□□□□ -0.85
CIITA-212ENST00000618207 TOMM40O96008 361 aa9.71□□□□□ -0.85
CIITA-212ENST00000618207 BAGE3Q86Y29 109 aa9.71□□□□□ -0.85
CIITA-212ENST00000618207 TTC9CQ8N5M4 171 aa9.71□□□□□ -0.85
CIITA-212ENST00000618207 THYN1Q9P016 225 aa9.71□□□□□ -0.85
CIITA-212ENST00000618207 HIGD1CA8MV81 97 aa9.71□□□□□ -0.86
CIITA-212ENST00000618207 OOSP1A8MZH6 123 aa9.71□□□□□ -0.86
CIITA-212ENST00000618207 H3BRN7 92 aa9.71□□□□□ -0.86
CIITA-212ENST00000618207 CCL25O15444 150 aa9.71□□□□□ -0.86
CIITA-212ENST00000618207 HLA-DRB1P01911 266 aa9.71□□□□□ -0.86
CIITA-212ENST00000618207 MAPK1IP1LQ8NDC0 245 aa9.71□□□□□ -0.86
CIITA-212ENST00000618207 OR2D3Q8NGH3 330 aa9.71□□□□□ -0.86
CIITA-212ENST00000618207 PIMREGQ9BSJ6 248 aa9.71□□□□□ -0.86
CIITA-212ENST00000618207 TBL2Q9Y4P3 447 aaKnown RBP9.71□□□□□ -0.86
CIITA-212ENST00000618207 IGHV4-38-2P0DP08 117 aa9.7□□□□□ -0.86
CIITA-212ENST00000618207 EBI3Q14213 229 aa9.7□□□□□ -0.86
CIITA-212ENST00000618207 NUP35Q8NFH5 326 aa9.7□□□□□ -0.86
CIITA-212ENST00000618207 TMEM18Q96B42 140 aa9.7□□□□□ -0.86
CIITA-212ENST00000618207 BBC3Q96PG8 261 aaPredicted RBP9.7□□□□□ -0.86
CIITA-212ENST00000618207 TRBV19A0A075B6N1 114 aa9.7□□□□□ -0.86
CIITA-212ENST00000618207 ZNF207O43670 478 aaKnown RBP9.7□□□□□ -0.86
CIITA-212ENST00000618207 SERF1AO75920 110 aa9.7□□□□□ -0.86
CIITA-212ENST00000618207 RHOGP84095 191 aa9.7□□□□□ -0.86
CIITA-212ENST00000618207 RPL19P84098 196 aaKnown RBP9.7□□□□□ -0.86
CIITA-212ENST00000618207 ZNF331Q9NQX6 463 aaPredicted RBP9.7□□□□□ -0.86
CIITA-212ENST00000618207 TP53TG3Q9ULZ0 132 aa9.7□□□□□ -0.86
CIITA-212ENST00000618207 SMIM27A0A1W2PRY6 76 aa9.69□□□□□ -0.86
CIITA-212ENST00000618207 CLEC3BP05452 202 aa9.69□□□□□ -0.86
CIITA-212ENST00000618207 CTSGP08311 255 aa9.69□□□□□ -0.86
CIITA-212ENST00000618207 TMEM136Q6ZRR5 245 aa9.69□□□□□ -0.86
CIITA-212ENST00000618207 GBGT1Q8N5D6 347 aa9.69□□□□□ -0.86
CIITA-212ENST00000618207 DAZAP1Q96EP5 407 aaKnown RBP9.69□□□□□ -0.86
CIITA-212ENST00000618207 SRIP30626 198 aa9.69□□□□□ -0.86
CIITA-212ENST00000618207 COA6Q5JTJ3 125 aaKnown RBP9.69□□□□□ -0.86
CIITA-212ENST00000618207 CLEC19AQ6UXS0 136 aa9.69□□□□□ -0.86
CIITA-212ENST00000618207 FBN2P35556 2912 aa9.69□□□□□ -0.86
CIITA-212ENST00000618207 NAV2Q8IVL1 2488 aa9.69□□□□□ -0.86
CIITA-212ENST00000618207 VWC2LB2RUY7 222 aa9.69□□□□□ -0.86
CIITA-212ENST00000618207 SLAQ13239 276 aa9.69□□□□□ -0.86
CIITA-212ENST00000618207 PGLYRP4Q96LB8 373 aa9.69□□□□□ -0.86
CIITA-212ENST00000618207 OTORQ9NRC9 128 aa9.69□□□□□ -0.86
CIITA-212ENST00000618207 IZUMO1RA6ND01 250 aa9.68□□□□□ -0.86
CIITA-212ENST00000618207 P01737 135 aa9.68□□□□□ -0.86
CIITA-212ENST00000618207 COL8A1P27658 744 aa9.68□□□□□ -0.86
CIITA-212ENST00000618207 HLA-DMBP28068 263 aa9.68□□□□□ -0.86
CIITA-212ENST00000618207 C10orf105Q8TEF2 133 aa9.68□□□□□ -0.86
CIITA-212ENST00000618207 FMC1Q96HJ9 113 aa9.68□□□□□ -0.86
CIITA-212ENST00000618207 C7orf69Q9H7B7 122 aa9.68□□□□□ -0.86
CIITA-212ENST00000618207 TRAV30A0A087WSZ9 112 aa9.68□□□□□ -0.86
CIITA-212ENST00000618207 WI2-2373I1.2A0A1W2PRP0 233 aa9.68□□□□□ -0.86
CIITA-212ENST00000618207 SCGB1D1O95968 90 aa9.68□□□□□ -0.86
CIITA-212ENST00000618207 IGLC2P0DOY2 106 aa9.68□□□□□ -0.86
CIITA-212ENST00000618207 COL5A1-AS1Q5SY13 56 aa9.68□□□□□ -0.86
CIITA-212ENST00000618207 SIGLEC15Q6ZMC9 328 aa9.68□□□□□ -0.86
CIITA-212ENST00000618207 ZNF414Q96IQ9 312 aa9.68□□□□□ -0.86
CIITA-212ENST00000618207 TPPP3Q9BW30 176 aa9.68□□□□□ -0.86
CIITA-212ENST00000618207 GNB1LQ9BYB4 327 aa9.68□□□□□ -0.86
CIITA-212ENST00000618207 LINC00310P59036 64 aa9.67□□□□□ -0.86
CIITA-212ENST00000618207 IQCJQ1A5X6 159 aa9.67□□□□□ -0.86
CIITA-212ENST00000618207 Q86TA4 180 aa9.67□□□□□ -0.86
CIITA-212ENST00000618207 SMIM12Q96EX1 92 aa9.67□□□□□ -0.86
CIITA-212ENST00000618207 GRAMD2BQ96HH9 432 aa9.67□□□□□ -0.86
CIITA-212ENST00000618207 RCHY1Q96PM5 261 aa9.67□□□□□ -0.86
CIITA-212ENST00000618207 MLST8Q9BVC4 326 aa9.67□□□□□ -0.86
CIITA-212ENST00000618207 SAMD10Q9BYL1 202 aa9.67□□□□□ -0.86
CIITA-212ENST00000618207 KLF12Q9Y4X4 402 aa9.67□□□□□ -0.86
CIITA-212ENST00000618207 TRAV9-1A0A075B6T8 112 aa9.67□□□□□ -0.86
CIITA-212ENST00000618207 ZNF253O75346 499 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms