RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 ZNF767PQ75MW2 155 aa3.3□□□□□ -1.88
CUL3-216ENST00000617432 TRPT1Q86TN4 253 aaKnown RBP3.3□□□□□ -1.88
CUL3-216ENST00000617432 LRTM2Q8N967 370 aa3.3□□□□□ -1.88
CUL3-216ENST00000617432 OR4D5Q8NGN0 318 aa3.3□□□□□ -1.88
CUL3-216ENST00000617432 OCC1Q8TAD7 63 aa3.3□□□□□ -1.88
CUL3-216ENST00000617432 RNASEH2CQ8TDP1 164 aaKnown RBP3.3□□□□□ -1.88
CUL3-216ENST00000617432 SEC22CQ9BRL7 303 aa3.3□□□□□ -1.88
CUL3-216ENST00000617432 CELA1Q9UNI1 258 aa3.3□□□□□ -1.88
CUL3-216ENST00000617432 KCNIP3Q9Y2W7 256 aa3.3□□□□□ -1.88
CUL3-216ENST00000617432 AGRNO00468 2067 aa3.29□□□□□ -1.88
CUL3-216ENST00000617432 TRAV6A0A075B6T7 132 aa3.29□□□□□ -1.88
CUL3-216ENST00000617432 IGHV4-28A0A0C4DH34 117 aa3.29□□□□□ -1.88
CUL3-216ENST00000617432 C5orf52A6NGY3 159 aa3.29□□□□□ -1.88
CUL3-216ENST00000617432 ZFP92A6NM28 416 aa3.29□□□□□ -1.88
CUL3-216ENST00000617432 FAM90A26D6RGX4 464 aa3.29□□□□□ -1.88
CUL3-216ENST00000617432 ZNF701M0R085 212 aaPredicted RBP3.29□□□□□ -1.88
CUL3-216ENST00000617432 SOCS3O14543 225 aa3.29□□□□□ -1.88
CUL3-216ENST00000617432 SSSCA1O60232 199 aa3.29□□□□□ -1.88
CUL3-216ENST00000617432 DEDDO75618 318 aa3.29□□□□□ -1.88
CUL3-216ENST00000617432 PRM2P04554 102 aa3.29□□□□□ -1.88
CUL3-216ENST00000617432 SNRPCP09234 159 aaKnown RBP3.29□□□□□ -1.88
CUL3-216ENST00000617432 OR4E1P0C645 316 aa3.29□□□□□ -1.88
CUL3-216ENST00000617432 RD3LP0DJH9 198 aa3.29□□□□□ -1.88
CUL3-216ENST00000617432 SLC25A4P12235 298 aa3.29□□□□□ -1.88
CUL3-216ENST00000617432 ANXA3P12429 323 aa3.29□□□□□ -1.88
CUL3-216ENST00000617432 HLA-DMBP28068 263 aa3.29□□□□□ -1.88
CUL3-216ENST00000617432 FAUP35544 74 aaKnown RBP3.29□□□□□ -1.88
CUL3-216ENST00000617432 AP3S2P59780 193 aa3.29□□□□□ -1.88
CUL3-216ENST00000617432 YPEL3P61236 119 aaPredicted RBP3.29□□□□□ -1.88
CUL3-216ENST00000617432 RRAS2P62070 204 aaPredicted RBP3.29□□□□□ -1.88
CUL3-216ENST00000617432 SPANXN5Q5MJ07 72 aa3.29□□□□□ -1.88
CUL3-216ENST00000617432 SPANXN2Q5MJ10 180 aa3.29□□□□□ -1.88
CUL3-216ENST00000617432 Q8NAQ8 132 aa3.29□□□□□ -1.88
CUL3-216ENST00000617432 OR11H2Q8NH07 326 aa3.29□□□□□ -1.88
CUL3-216ENST00000617432 RNASE8Q8TDE3 154 aaKnown RBP3.29□□□□□ -1.88
CUL3-216ENST00000617432 Q8WTZ3 238 aa3.29□□□□□ -1.88
CUL3-216ENST00000617432 TMED6Q8WW62 240 aa3.29□□□□□ -1.88
CUL3-216ENST00000617432 SLC35E1Q96K37 410 aa3.29□□□□□ -1.88
CUL3-216ENST00000617432 SCGB3A2Q96PL1 93 aa3.29□□□□□ -1.88
CUL3-216ENST00000617432 RAB40CQ96S21 281 aa3.29□□□□□ -1.88
CUL3-216ENST00000617432 SLC25A21Q9BQT8 299 aaPredicted RBP3.29□□□□□ -1.88
CUL3-216ENST00000617432 CSTL1Q9H114 145 aa3.29□□□□□ -1.88
CUL3-216ENST00000617432 C20orf85Q9H1P6 137 aa3.29□□□□□ -1.88
CUL3-216ENST00000617432 DOK5Q9P104 306 aa3.29□□□□□ -1.88
CUL3-216ENST00000617432 TBC1D24Q9ULP9 559 aa3.29□□□□□ -1.88
CUL3-216ENST00000617432 TP53TG1Q9Y2A0 90 aa3.29□□□□□ -1.88
CUL3-216ENST00000617432 RCL1Q9Y2P8 373 aaKnown RBP3.29□□□□□ -1.88
CUL3-216ENST00000617432 TRAV30A0A087WSZ9 112 aa3.28□□□□□ -1.88
CUL3-216ENST00000617432 KIR2DL5BA0A0G2JN68 375 aa3.28□□□□□ -1.88
CUL3-216ENST00000617432 KIR2DL5BA0A0G2JPC4 375 aa3.28□□□□□ -1.88
CUL3-216ENST00000617432 DUXBA0A1W2PPF3 345 aa3.28□□□□□ -1.88
CUL3-216ENST00000617432 HELTA6NFD8 242 aa3.28□□□□□ -1.88
CUL3-216ENST00000617432 SYNGR2O43760 224 aa3.28□□□□□ -1.88
CUL3-216ENST00000617432 LY6G6CO95867 125 aa3.28□□□□□ -1.88
CUL3-216ENST00000617432 METTL15P1P0C7V9 234 aa3.28□□□□□ -1.88
CUL3-216ENST00000617432 ZNF705DP0CH99 300 aaPredicted RBP3.28□□□□□ -1.88
CUL3-216ENST00000617432 ZNF705BP0CI00 300 aaPredicted RBP3.28□□□□□ -1.88
CUL3-216ENST00000617432 INPP1P49441 399 aa3.28□□□□□ -1.88
CUL3-216ENST00000617432 EIF2B2P49770 351 aaKnown RBP3.28□□□□□ -1.88
CUL3-216ENST00000617432 PAFAH1B2P68402 229 aa3.28□□□□□ -1.88
CUL3-216ENST00000617432 SRPXP78539 464 aa3.28□□□□□ -1.88
CUL3-216ENST00000617432 IFITM3Q01628 133 aa3.28□□□□□ -1.88
CUL3-216ENST00000617432 SLC38A11Q08AI6 406 aa3.28□□□□□ -1.88
CUL3-216ENST00000617432 OR8G2PQ6IF36 304 aa3.28□□□□□ -1.88
CUL3-216ENST00000617432 SIGLEC15Q6ZMC9 328 aa3.28□□□□□ -1.88
CUL3-216ENST00000617432 STHQ8IWL8 128 aa3.28□□□□□ -1.88
CUL3-216ENST00000617432 KIR2DL5AQ8N109 375 aa3.28□□□□□ -1.88
CUL3-216ENST00000617432 RPP25LQ8N5L8 163 aaKnown RBP3.28□□□□□ -1.88
CUL3-216ENST00000617432 THAP8Q8NA92 274 aa3.28□□□□□ -1.88
CUL3-216ENST00000617432 CSNK1G2-AS1Q8NCQ2 148 aa3.28□□□□□ -1.88
CUL3-216ENST00000617432 KIR2DL5BQ8NHK3 375 aa3.28□□□□□ -1.88
CUL3-216ENST00000617432 PHLDA1Q8WV24 401 aaPredicted RBP3.28□□□□□ -1.88
CUL3-216ENST00000617432 UHRF2Q96PU4 802 aa3.28□□□□□ -1.88
CUL3-216ENST00000617432 RARRES2Q99969 163 aa3.28□□□□□ -1.88
CUL3-216ENST00000617432 SLC35B3Q9H1N7 401 aa3.28□□□□□ -1.88
CUL3-216ENST00000617432 SLC25A22Q9H936 323 aa3.28□□□□□ -1.88
CUL3-216ENST00000617432 PSENENQ9NZ42 101 aa3.28□□□□□ -1.88
CUL3-216ENST00000617432 TMED3Q9Y3Q3 217 aa3.28□□□□□ -1.88
CUL3-216ENST00000617432 U3KQ87 197 aa3.28□□□□□ -1.88
CUL3-216ENST00000617432 TRAV2A0A0B4J234 112 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 TRAV8-2A0A0B4J237 113 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 A0A1W2PS18 150 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 SMCO3A2RU48 225 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 H3BMM0 161 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 H3BTX0 84 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 K7EQM0 130 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 LYRM1O43325 122 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 SLC25A6P12236 298 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 ORM2P19652 201 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 GPX4P36969 197 aaPredicted RBP3.27□□□□□ -1.89
CUL3-216ENST00000617432 AKR1C1Q04828 323 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 IAH1Q2TAA2 248 aaPredicted RBP3.27□□□□□ -1.89
CUL3-216ENST00000617432 CNPY1Q3B7I2 92 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 CEMP1Q6PRD7 247 aaPredicted RBP3.27□□□□□ -1.89
CUL3-216ENST00000617432 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 PATE2Q6UY27 113 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 RNF182Q8N6D2 247 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 ZNF709Q8N972 641 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 OR1B1Q8NGR6 318 aa3.27□□□□□ -1.89
CUL3-216ENST00000617432 GRAMD2BQ96HH9 432 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms