RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 ALS2Q96Q42 1657 aa4.89□□□□□ -1.63
RFX3-212ENST00000617270 A8MWP6 167 aa4.89□□□□□ -1.63
RFX3-212ENST00000617270 AZU1P20160 251 aa4.89□□□□□ -1.63
RFX3-212ENST00000617270 RNASE13Q5GAN3 156 aaKnown RBP4.89□□□□□ -1.63
RFX3-212ENST00000617270 NRXN3Q9Y4C0 1643 aa4.89□□□□□ -1.63
RFX3-212ENST00000617270 CACNA1EQ15878 2313 aa4.89□□□□□ -1.63
RFX3-212ENST00000617270 H0YJW9 148 aa4.89□□□□□ -1.63
RFX3-212ENST00000617270 SPRR3Q9UBC9 169 aa4.89□□□□□ -1.63
RFX3-212ENST00000617270 SCN7AQ01118 1682 aa4.88□□□□□ -1.63
RFX3-212ENST00000617270 PYY3Q5JQD4 70 aa4.88□□□□□ -1.63
RFX3-212ENST00000617270 USMG5Q96IX5 58 aa4.88□□□□□ -1.63
RFX3-212ENST00000617270 SPANXA1Q9NS26 97 aa4.88□□□□□ -1.63
RFX3-212ENST00000617270 SLAQ13239 276 aa4.88□□□□□ -1.63
RFX3-212ENST00000617270 COL22A1Q8NFW1 1626 aaPredicted RBP4.88□□□□□ -1.63
RFX3-212ENST00000617270 A0A1B0GUS0 222 aa4.88□□□□□ -1.63
RFX3-212ENST00000617270 IL18BPO95998 194 aa4.88□□□□□ -1.63
RFX3-212ENST00000617270 GAS1P54826 345 aa4.88□□□□□ -1.63
RFX3-212ENST00000617270 TMEM141Q96I45 108 aa4.88□□□□□ -1.63
RFX3-212ENST00000617270 LINC00479Q96M42 142 aa4.88□□□□□ -1.63
RFX3-212ENST00000617270 CD177Q8N6Q3 437 aa4.88□□□□□ -1.63
RFX3-212ENST00000617270 ABCA3Q99758 1704 aa4.88□□□□□ -1.63
RFX3-212ENST00000617270 IGKV1-39P01597 117 aa4.88□□□□□ -1.63
RFX3-212ENST00000617270 IGKV1D-39P04432 117 aa4.88□□□□□ -1.63
RFX3-212ENST00000617270 ZNF664Q8N3J9 261 aa4.88□□□□□ -1.63
RFX3-212ENST00000617270 PAQR4Q8N4S7 273 aaPredicted RBP4.88□□□□□ -1.63
RFX3-212ENST00000617270 C8orf31Q8N9H6 132 aa4.88□□□□□ -1.63
RFX3-212ENST00000617270 ZNRF2Q8NHG8 242 aa4.88□□□□□ -1.63
RFX3-212ENST00000617270 SS18L2Q9UHA2 77 aa4.88□□□□□ -1.63
RFX3-212ENST00000617270 SDHAF1A6NFY7 115 aa4.88□□□□□ -1.63
RFX3-212ENST00000617270 PSPNO60542 156 aa4.88□□□□□ -1.63
RFX3-212ENST00000617270 TRAV12-2A0A075B6T6 113 aa4.87□□□□□ -1.63
RFX3-212ENST00000617270 TRAV1-1A0A0B4J248 108 aa4.87□□□□□ -1.63
RFX3-212ENST00000617270 E9PLN8 166 aa4.87□□□□□ -1.63
RFX3-212ENST00000617270 PFN1P07737 140 aaKnown RBP4.87□□□□□ -1.63
RFX3-212ENST00000617270 RMI2Q96E14 147 aa4.87□□□□□ -1.63
RFX3-212ENST00000617270 TMEM243Q9BU79 118 aa4.87□□□□□ -1.63
RFX3-212ENST00000617270 MBD3L4A6NDZ8 208 aaPredicted RBP4.87□□□□□ -1.63
RFX3-212ENST00000617270 MBD3L3A6NE82 208 aaPredicted RBP4.87□□□□□ -1.63
RFX3-212ENST00000617270 MBD3L5A6NJ08 208 aaPredicted RBP4.87□□□□□ -1.63
RFX3-212ENST00000617270 SPACA3Q8IXA5 215 aa4.87□□□□□ -1.63
RFX3-212ENST00000617270 C15orf53Q8NAA6 179 aa4.87□□□□□ -1.63
RFX3-212ENST00000617270 MBD3L2Q8NHZ7 208 aaPredicted RBP4.87□□□□□ -1.63
RFX3-212ENST00000617270 IGKV1-12A0A0C4DH73 117 aa4.87□□□□□ -1.63
RFX3-212ENST00000617270 LY6HO94772 140 aa4.87□□□□□ -1.63
RFX3-212ENST00000617270 IGKV1D-12P01611 117 aa4.87□□□□□ -1.63
RFX3-212ENST00000617270 ANGP03950 147 aaKnown RBP4.87□□□□□ -1.63
RFX3-212ENST00000617270 RUSC1-AS1Q66K80 236 aa4.87□□□□□ -1.63
RFX3-212ENST00000617270 CNOT1A5YKK6 2376 aaKnown RBP4.87□□□□□ -1.63
RFX3-212ENST00000617270 PINLYPA6NC86 204 aa4.87□□□□□ -1.63
RFX3-212ENST00000617270 SRRM5B3KS81 715 aa4.87□□□□□ -1.63
RFX3-212ENST00000617270 BUB1B-PAK6H3BSN5 160 aa4.87□□□□□ -1.63
RFX3-212ENST00000617270 TMEM190Q8WZ59 177 aa4.87□□□□□ -1.63
RFX3-212ENST00000617270 C14orf132Q9NPU4 83 aa4.87□□□□□ -1.63
RFX3-212ENST00000617270 CACNA1BQ00975 2339 aa4.87□□□□□ -1.63
RFX3-212ENST00000617270 LINC00473A8K010 186 aa4.87□□□□□ -1.63
RFX3-212ENST00000617270 K7EP34 96 aa4.87□□□□□ -1.63
RFX3-212ENST00000617270 MINOS1Q5TGZ0 78 aa4.87□□□□□ -1.63
RFX3-212ENST00000617270 MINOS1-NBL1R4GNA1 71 aa4.87□□□□□ -1.63
RFX3-212ENST00000617270 IGKV1OR2-108A0A075B7D4 117 aa4.87□□□□□ -1.63
RFX3-212ENST00000617270 FAM104BQ5XKR9 115 aa4.87□□□□□ -1.63
RFX3-212ENST00000617270 MAPK1IP1LQ8NDC0 245 aa4.87□□□□□ -1.63
RFX3-212ENST00000617270 SHANK2-AS3Q9BTD1 123 aa4.87□□□□□ -1.63
RFX3-212ENST00000617270 SPTAN1Q13813 2472 aaKnown RBP4.87□□□□□ -1.63
RFX3-212ENST00000617270 IGKV2D-24A0A075B6R9 120 aa4.87□□□□□ -1.63
RFX3-212ENST00000617270 HLA-DRB4P13762 266 aa4.87□□□□□ -1.63
RFX3-212ENST00000617270 GNLYP22749 145 aa4.87□□□□□ -1.63
RFX3-212ENST00000617270 RPL18AQ02543 176 aaKnown RBP4.87□□□□□ -1.63
RFX3-212ENST00000617270 ANKRD29Q8N6D5 301 aa4.87□□□□□ -1.63
RFX3-212ENST00000617270 FAM110DQ8TAY7 271 aaPredicted RBP4.87□□□□□ -1.63
RFX3-212ENST00000617270 DKK4Q9UBT3 224 aa4.87□□□□□ -1.63
RFX3-212ENST00000617270 HLA-DRB4X5D2U9 266 aa4.87□□□□□ -1.63
RFX3-212ENST00000617270 MCM3APO60318 1980 aa4.86□□□□□ -1.63
RFX3-212ENST00000617270 TMEM178BH3BS89 294 aa4.86□□□□□ -1.63
RFX3-212ENST00000617270 IGHG2P01859 326 aa4.86□□□□□ -1.63
RFX3-212ENST00000617270 NTF4P34130 210 aa4.86□□□□□ -1.63
RFX3-212ENST00000617270 Q71RC1 249 aaPredicted RBP4.86□□□□□ -1.63
RFX3-212ENST00000617270 OR11H6Q8NGC7 330 aa4.86□□□□□ -1.63
RFX3-212ENST00000617270 GFRA4Q9GZZ7 299 aa4.86□□□□□ -1.63
RFX3-212ENST00000617270 POLR3KQ9Y2Y1 108 aaPredicted RBP4.86□□□□□ -1.63
RFX3-212ENST00000617270 LY75O60449 1722 aa4.86□□□□□ -1.63
RFX3-212ENST00000617270 C9orf118A6NHY6 69 aa4.86□□□□□ -1.63
RFX3-212ENST00000617270 IGKV1-27A0A075B6S5 117 aa4.86□□□□□ -1.63
RFX3-212ENST00000617270 SAA4P35542 130 aa4.86□□□□□ -1.63
RFX3-212ENST00000617270 TIMM17AQ99595 171 aa4.86□□□□□ -1.63
RFX3-212ENST00000617270 TRIP12Q14669 1992 aaPredicted RBP4.86□□□□□ -1.63
RFX3-212ENST00000617270 TRAV13-2A0A0B4J235 113 aa4.86□□□□□ -1.63
RFX3-212ENST00000617270 XCL1P47992 114 aa4.86□□□□□ -1.63
RFX3-212ENST00000617270 LINC00205P59089 165 aa4.86□□□□□ -1.63
RFX3-212ENST00000617270 C20orf204Q6ZNR8 217 aa4.86□□□□□ -1.63
RFX3-212ENST00000617270 C5orf24Q7Z6I8 188 aa4.86□□□□□ -1.63
RFX3-212ENST00000617270 IGF2BP2-AS1Q96M15 143 aa4.86□□□□□ -1.63
RFX3-212ENST00000617270 HS3ST6Q96QI5 342 aa4.86□□□□□ -1.63
RFX3-212ENST00000617270 TEX48A0A1B0GUV7 120 aa4.86□□□□□ -1.63
RFX3-212ENST00000617270 F8W1H4 67 aa4.86□□□□□ -1.63
RFX3-212ENST00000617270 LINC00114Q6XXX2 140 aa4.86□□□□□ -1.63
RFX3-212ENST00000617270 Q8N8P6 123 aa4.86□□□□□ -1.63
RFX3-212ENST00000617270 SIGLEC9Q9Y336 463 aa4.86□□□□□ -1.63
RFX3-212ENST00000617270 LY96Q9Y6Y9 160 aa4.86□□□□□ -1.63
RFX3-212ENST00000617270 MPDZO75970 2070 aa4.86□□□□□ -1.63
RFX3-212ENST00000617270 SDK2Q58EX2 2172 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms