RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 GBGT1Q8N5D6 347 aa11.11□□□□□ -0.63
UBXN1-218ENST00000616865 ALMS1Q8TCU4 4167 aa11.1□□□□□ -0.63
UBXN1-218ENST00000616865 OR7C2O60412 319 aa11.1□□□□□ -0.63
UBXN1-218ENST00000616865 TFPI2P48307 235 aa11.1□□□□□ -0.63
UBXN1-218ENST00000616865 MORN5Q5VZ52 161 aa11.1□□□□□ -0.63
UBXN1-218ENST00000616865 GTSCR1Q86UQ5 136 aa11.1□□□□□ -0.63
UBXN1-218ENST00000616865 WFDC3Q8IUB2 231 aa11.1□□□□□ -0.63
UBXN1-218ENST00000616865 TMEM61Q8N0U2 210 aa11.1□□□□□ -0.63
UBXN1-218ENST00000616865 LRRC20Q8TCA0 184 aa11.1□□□□□ -0.63
UBXN1-218ENST00000616865 SEPSECSQ9HD40 501 aaKnown RBP11.1□□□□□ -0.63
UBXN1-218ENST00000616865 RPRMQ9NS64 109 aa11.1□□□□□ -0.63
UBXN1-218ENST00000616865 OR4C46A6NHA9 309 aa11.09□□□□□ -0.63
UBXN1-218ENST00000616865 TSPAN4O14817 238 aa11.09□□□□□ -0.63
UBXN1-218ENST00000616865 FAM213BQ8TBF2 198 aa11.09□□□□□ -0.63
UBXN1-218ENST00000616865 PHYHIPLQ96FC7 376 aa11.09□□□□□ -0.63
UBXN1-218ENST00000616865 SPAG8Q99932 426 aaPredicted RBP11.09□□□□□ -0.63
UBXN1-218ENST00000616865 IZUMO1RA6ND01 250 aa11.08□□□□□ -0.64
UBXN1-218ENST00000616865 HMGB3O15347 200 aaKnown RBP11.08□□□□□ -0.64
UBXN1-218ENST00000616865 MEOX2P50222 304 aa11.08□□□□□ -0.64
UBXN1-218ENST00000616865 RAB5CP51148 216 aa11.08□□□□□ -0.64
UBXN1-218ENST00000616865 FAM90A2PQ658T7 463 aa11.08□□□□□ -0.64
UBXN1-218ENST00000616865 DPPA3Q6W0C5 159 aa11.08□□□□□ -0.64
UBXN1-218ENST00000616865 IQCF2Q8IXL9 164 aa11.08□□□□□ -0.64
UBXN1-218ENST00000616865 RPP25LQ8N5L8 163 aaKnown RBP11.08□□□□□ -0.64
UBXN1-218ENST00000616865 RAB24Q969Q5 203 aa11.08□□□□□ -0.64
UBXN1-218ENST00000616865 PAXXQ9BUH6 204 aa11.08□□□□□ -0.64
UBXN1-218ENST00000616865 SLC25A2Q9BXI2 301 aa11.08□□□□□ -0.64
UBXN1-218ENST00000616865 MS4A6AQ9H2W1 248 aa11.08□□□□□ -0.64
UBXN1-218ENST00000616865 OR51M1Q9H341 326 aa11.08□□□□□ -0.64
UBXN1-218ENST00000616865 TUBA4BQ9H853 241 aa11.08□□□□□ -0.64
UBXN1-218ENST00000616865 NRN1Q9NPD7 142 aa11.08□□□□□ -0.64
UBXN1-218ENST00000616865 CTXND1A0A1B0GTU2 59 aa11.07□□□□□ -0.64
UBXN1-218ENST00000616865 SAMD13Q5VXD3 122 aa11.07□□□□□ -0.64
UBXN1-218ENST00000616865 ALKAL2Q6UX46 152 aa11.07□□□□□ -0.64
UBXN1-218ENST00000616865 RETNQ9HD89 108 aa11.07□□□□□ -0.64
UBXN1-218ENST00000616865 TMEM14CQ9P0S9 112 aa11.07□□□□□ -0.64
UBXN1-218ENST00000616865 EIF3GO75821 320 aaKnown RBP eCLIP11.06□□□□□ -0.64
UBXN1-218ENST00000616865 CXorf1O96002 111 aa11.06□□□□□ -0.64
UBXN1-218ENST00000616865 PYYP10082 97 aa11.06□□□□□ -0.64
UBXN1-218ENST00000616865 ID1P41134 155 aa11.06□□□□□ -0.64
UBXN1-218ENST00000616865 SULT1A2P50226 295 aa11.06□□□□□ -0.64
UBXN1-218ENST00000616865 UBE2L3P68036 154 aaKnown RBP11.06□□□□□ -0.64
UBXN1-218ENST00000616865 GUK1Q16774 197 aa11.06□□□□□ -0.64
UBXN1-218ENST00000616865 PQLC2Q6ZP29 291 aa11.06□□□□□ -0.64
UBXN1-218ENST00000616865 IL17DQ8TAD2 202 aa11.06□□□□□ -0.64
UBXN1-218ENST00000616865 RNF141Q8WVD5 230 aa11.06□□□□□ -0.64
UBXN1-218ENST00000616865 C16orf92Q96LL3 132 aa11.06□□□□□ -0.64
UBXN1-218ENST00000616865 TRAV2A0A0B4J234 112 aa11.05□□□□□ -0.64
UBXN1-218ENST00000616865 MAP1LC3B2A6NCE7 125 aa11.05□□□□□ -0.64
UBXN1-218ENST00000616865 TEX46H3BTG2 121 aa11.05□□□□□ -0.64
UBXN1-218ENST00000616865 SNRPCP09234 159 aaKnown RBP11.05□□□□□ -0.64
UBXN1-218ENST00000616865 OR10J4P0C629 311 aa11.05□□□□□ -0.64
UBXN1-218ENST00000616865 ARL14EPLP0DKL9 152 aa11.05□□□□□ -0.64
UBXN1-218ENST00000616865 HIST1H1EP10412 219 aaKnown RBP11.05□□□□□ -0.64
UBXN1-218ENST00000616865 FAM74A1Q5RGS3 127 aa11.05□□□□□ -0.64
UBXN1-218ENST00000616865 LCN15Q6UWW0 184 aa11.05□□□□□ -0.64
UBXN1-218ENST00000616865 LINC00322Q6ZN03 302 aaPredicted RBP11.05□□□□□ -0.64
UBXN1-218ENST00000616865 BLNKQ8WV28 456 aa11.05□□□□□ -0.64
UBXN1-218ENST00000616865 FAM167A-AS1Q96KT0 104 aa11.05□□□□□ -0.64
UBXN1-218ENST00000616865 FAM110AQ9BQ89 295 aa11.05□□□□□ -0.64
UBXN1-218ENST00000616865 MAP1LC3BQ9GZQ8 125 aa11.05□□□□□ -0.64
UBXN1-218ENST00000616865 A0A087X0K7 114 aa11.04□□□□□ -0.64
UBXN1-218ENST00000616865 ZNF705EA8MWA4 302 aaPredicted RBP11.04□□□□□ -0.64
UBXN1-218ENST00000616865 H3BTX0 84 aa11.04□□□□□ -0.64
UBXN1-218ENST00000616865 IFNA7P01567 189 aa11.04□□□□□ -0.64
UBXN1-218ENST00000616865 H2AFB1P0C5Y9 115 aa11.04□□□□□ -0.64
UBXN1-218ENST00000616865 STAG3L2P0CL84 134 aa11.04□□□□□ -0.64
UBXN1-218ENST00000616865 STAG3L3P0CL85 134 aa11.04□□□□□ -0.64
UBXN1-218ENST00000616865 FHITP49789 147 aa11.04□□□□□ -0.64
UBXN1-218ENST00000616865 CMC4P56277 68 aaPredicted RBP11.04□□□□□ -0.64
UBXN1-218ENST00000616865 SNRPD3P62318 126 aaKnown RBP11.04□□□□□ -0.64
UBXN1-218ENST00000616865 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.04□□□□□ -0.64
UBXN1-218ENST00000616865 SFT2D1Q8WV19 159 aa11.04□□□□□ -0.64
UBXN1-218ENST00000616865 HRH4Q9H3N8 390 aa11.04□□□□□ -0.64
UBXN1-218ENST00000616865 PLA2G2EQ9NZK7 142 aa11.04□□□□□ -0.64
UBXN1-218ENST00000616865 K7EQG2 157 aa11.03□□□□□ -0.64
UBXN1-218ENST00000616865 MRPS12O15235 138 aaKnown RBP11.03□□□□□ -0.64
UBXN1-218ENST00000616865 NBEAP1P0C6P0 100 aa11.03□□□□□ -0.64
UBXN1-218ENST00000616865 IGLC2P0DOY2 106 aa11.03□□□□□ -0.64
UBXN1-218ENST00000616865 GCHFRP30047 84 aa11.03□□□□□ -0.64
UBXN1-218ENST00000616865 FGF8P55075 233 aaPredicted RBP11.03□□□□□ -0.64
UBXN1-218ENST00000616865 CD81P60033 236 aa11.03□□□□□ -0.64
UBXN1-218ENST00000616865 ZNF726P1Q15940 193 aa11.03□□□□□ -0.64
UBXN1-218ENST00000616865 LINC00052Q96N35 136 aa11.03□□□□□ -0.64
UBXN1-218ENST00000616865 TMEM167BQ9NRX6 74 aa11.03□□□□□ -0.64
UBXN1-218ENST00000616865 A0A1B0GV50 99 aa11.02□□□□□ -0.65
UBXN1-218ENST00000616865 H3BQ15 152 aa11.02□□□□□ -0.65
UBXN1-218ENST00000616865 ISLRO14498 428 aa11.02□□□□□ -0.65
UBXN1-218ENST00000616865 HBE1P02100 147 aa11.02□□□□□ -0.65
UBXN1-218ENST00000616865 ZNF688P0C7X2 276 aa11.02□□□□□ -0.65
UBXN1-218ENST00000616865 PSMB3P49720 205 aa11.02□□□□□ -0.65
UBXN1-218ENST00000616865 BLOC1S1P78537 153 aa11.02□□□□□ -0.65
UBXN1-218ENST00000616865 PSG9Q00887 426 aa11.02□□□□□ -0.65
UBXN1-218ENST00000616865 TEX261Q6UWH6 196 aa11.02□□□□□ -0.65
UBXN1-218ENST00000616865 SSX7Q7RTT5 188 aa11.02□□□□□ -0.65
UBXN1-218ENST00000616865 C17orf77Q96MU5 243 aa11.02□□□□□ -0.65
UBXN1-218ENST00000616865 SLC50A1Q9BRV3 221 aa11.02□□□□□ -0.65
UBXN1-218ENST00000616865 AAMDCQ9H7C9 122 aa11.02□□□□□ -0.65
UBXN1-218ENST00000616865 ZNF586Q9NXT0 402 aa11.02□□□□□ -0.65
UBXN1-218ENST00000616865 TRBV19A0A075B6N1 114 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms