RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 ATP5L2Q7Z4Y8 100 aa10.54□□□□□ -0.72
MSH6-214ENST00000616033 TMEM178AQ8NBL3 297 aa10.54□□□□□ -0.72
MSH6-214ENST00000616033 NDUFA4L2Q9NRX3 87 aa10.54□□□□□ -0.72
MSH6-214ENST00000616033 A0A1W2PPI3 338 aa10.53□□□□□ -0.72
MSH6-214ENST00000616033 PSMB11A5LHX3 300 aa10.53□□□□□ -0.72
MSH6-214ENST00000616033 FNDC10F2Z333 226 aa10.53□□□□□ -0.72
MSH6-214ENST00000616033 NKX2-8O15522 239 aa10.53□□□□□ -0.72
MSH6-214ENST00000616033 RPRMLQ8N4K4 120 aa10.53□□□□□ -0.72
MSH6-214ENST00000616033 SMIM20Q8N5G0 67 aa10.53□□□□□ -0.72
MSH6-214ENST00000616033 ZNF747Q9BV97 191 aa10.53□□□□□ -0.72
MSH6-214ENST00000616033 K7EP34 96 aa10.53□□□□□ -0.72
MSH6-214ENST00000616033 PLGLAQ15195 96 aa10.53□□□□□ -0.72
MSH6-214ENST00000616033 PROCRQ9UNN8 238 aa10.53□□□□□ -0.72
MSH6-214ENST00000616033 MDS2Q8NDY4 140 aa10.52□□□□□ -0.72
MSH6-214ENST00000616033 IGHV3-35A0A0C4DH35 117 aa10.52□□□□□ -0.73
MSH6-214ENST00000616033 WT1P19544 449 aaPredicted RBP10.52□□□□□ -0.73
MSH6-214ENST00000616033 MBNL2Q5VZF2 373 aaKnown RBP10.52□□□□□ -0.73
MSH6-214ENST00000616033 IGFL4Q6B9Z1 124 aa10.52□□□□□ -0.73
MSH6-214ENST00000616033 BOD1L2Q8IYS8 172 aa10.52□□□□□ -0.73
MSH6-214ENST00000616033 FER1L6-AS2Q96M78 137 aa10.52□□□□□ -0.73
MSH6-214ENST00000616033 C7orf69Q9H7B7 122 aa10.52□□□□□ -0.73
MSH6-214ENST00000616033 SPTAN1Q13813 2472 aaKnown RBP10.52□□□□□ -0.73
MSH6-214ENST00000616033 MZT1Q08AG7 82 aa10.52□□□□□ -0.73
MSH6-214ENST00000616033 CACNG8Q8WXS5 425 aa10.52□□□□□ -0.73
MSH6-214ENST00000616033 ZNF714Q96N38 554 aa10.52□□□□□ -0.73
MSH6-214ENST00000616033 DKK2Q9UBU2 259 aa10.52□□□□□ -0.73
MSH6-214ENST00000616033 AGRNO00468 2067 aa10.52□□□□□ -0.73
MSH6-214ENST00000616033 C9orf118A6NHY6 69 aa10.51□□□□□ -0.73
MSH6-214ENST00000616033 H3BMG7 143 aa10.51□□□□□ -0.73
MSH6-214ENST00000616033 VSTM2AQ8TAG5 236 aa10.51□□□□□ -0.73
MSH6-214ENST00000616033 RNF183Q96D59 192 aa10.51□□□□□ -0.73
MSH6-214ENST00000616033 RALYQ9UKM9 306 aaKnown RBP10.51□□□□□ -0.73
MSH6-214ENST00000616033 SAMD5Q5TGI4 173 aa10.51□□□□□ -0.73
MSH6-214ENST00000616033 GAFA1Q96PS6 74 aa10.51□□□□□ -0.73
MSH6-214ENST00000616033 LRBAP50851 2863 aa10.51□□□□□ -0.73
MSH6-214ENST00000616033 CRXO43186 299 aaPredicted RBP10.51□□□□□ -0.73
MSH6-214ENST00000616033 C8orf49Q96NF6 230 aa10.51□□□□□ -0.73
MSH6-214ENST00000616033 NHP2Q9NX24 153 aaKnown RBP10.51□□□□□ -0.73
MSH6-214ENST00000616033 PRSS1P07477 247 aa10.5□□□□□ -0.73
MSH6-214ENST00000616033 SLC25A48Q6ZT89 311 aaKnown RBP10.5□□□□□ -0.73
MSH6-214ENST00000616033 FDCSPQ8NFU4 85 aa10.5□□□□□ -0.73
MSH6-214ENST00000616033 C20orf78Q9BR46 151 aa10.5□□□□□ -0.73
MSH6-214ENST00000616033 MS4A6AQ9H2W1 248 aa10.5□□□□□ -0.73
MSH6-214ENST00000616033 A0A1B0GW15 77 aa10.5□□□□□ -0.73
MSH6-214ENST00000616033 EVI2AP22794 236 aa10.5□□□□□ -0.73
MSH6-214ENST00000616033 RIGQ13278 110 aa10.5□□□□□ -0.73
MSH6-214ENST00000616033 LINC01545Q5VT33 79 aa10.5□□□□□ -0.73
MSH6-214ENST00000616033 Q86TA4 180 aa10.5□□□□□ -0.73
MSH6-214ENST00000616033 ZNF414Q96IQ9 312 aa10.5□□□□□ -0.73
MSH6-214ENST00000616033 PRELID3AQ96N28 172 aa10.5□□□□□ -0.73
MSH6-214ENST00000616033 HIGD1AQ9Y241 93 aa10.5□□□□□ -0.73
MSH6-214ENST00000616033 CGB1A6NKQ9 187 aa10.49□□□□□ -0.73
MSH6-214ENST00000616033 ZADH2Q8N4Q0 377 aa10.49□□□□□ -0.73
MSH6-214ENST00000616033 OR4C13Q8NGP0 309 aa10.49□□□□□ -0.73
MSH6-214ENST00000616033 FMC1Q96HJ9 113 aa10.49□□□□□ -0.73
MSH6-214ENST00000616033 CGB3P0DN86 165 aa10.49□□□□□ -0.73
MSH6-214ENST00000616033 CGB7P0DN87 165 aa10.49□□□□□ -0.73
MSH6-214ENST00000616033 CD300EQ496F6 205 aaPredicted RBP10.49□□□□□ -0.73
MSH6-214ENST00000616033 KLF17Q5JT82 389 aaPredicted RBP10.49□□□□□ -0.73
MSH6-214ENST00000616033 NDFIP1Q9BT67 221 aa10.49□□□□□ -0.73
MSH6-214ENST00000616033 MLST8Q9BVC4 326 aa10.49□□□□□ -0.73
MSH6-214ENST00000616033 SIGLEC8Q9NYZ4 499 aa10.49□□□□□ -0.73
MSH6-214ENST00000616033 RAB9BQ9NP90 201 aa10.49□□□□□ -0.73
MSH6-214ENST00000616033 AKAP13Q12802 2813 aa10.48□□□□□ -0.73
MSH6-214ENST00000616033 LTAP01374 205 aa10.48□□□□□ -0.73
MSH6-214ENST00000616033 CT45A10P0DMU9 189 aa10.48□□□□□ -0.73
MSH6-214ENST00000616033 CKS2P33552 79 aa10.48□□□□□ -0.73
MSH6-214ENST00000616033 SEC11AP67812 179 aa10.48□□□□□ -0.73
MSH6-214ENST00000616033 FAM27E3Q08E93 113 aa10.48□□□□□ -0.73
MSH6-214ENST00000616033 TWIST1Q15672 202 aa10.48□□□□□ -0.73
MSH6-214ENST00000616033 LYZL1Q6UWQ5 148 aa10.48□□□□□ -0.73
MSH6-214ENST00000616033 C22orf34Q6ZV56 151 aa10.48□□□□□ -0.73
MSH6-214ENST00000616033 OR5AN1Q8NGI8 311 aa10.48□□□□□ -0.73
MSH6-214ENST00000616033 OSR1Q8TAX0 266 aaPredicted RBP10.48□□□□□ -0.73
MSH6-214ENST00000616033 ASH1LQ9NR48 2969 aaKnown RBP10.48□□□□□ -0.73
MSH6-214ENST00000616033 C19orf71A6NCJ1 209 aa10.48□□□□□ -0.73
MSH6-214ENST00000616033 CLEC3BP05452 202 aa10.48□□□□□ -0.73
MSH6-214ENST00000616033 SPINK8P0C7L1 97 aa10.48□□□□□ -0.73
MSH6-214ENST00000616033 COX7A1P24310 79 aa10.48□□□□□ -0.73
MSH6-214ENST00000616033 BCL6BQ8N143 479 aaPredicted RBP10.48□□□□□ -0.73
MSH6-214ENST00000616033 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.48□□□□□ -0.73
MSH6-214ENST00000616033 PRSS22Q9GZN4 317 aa10.48□□□□□ -0.73
MSH6-214ENST00000616033 A0A1B0GWB2 263 aa10.48□□□□□ -0.73
MSH6-214ENST00000616033 A0A1W2PPM0 123 aa10.48□□□□□ -0.73
MSH6-214ENST00000616033 IGHV1-46P01743 117 aa10.48□□□□□ -0.73
MSH6-214ENST00000616033 IGHV3-23P01764 117 aa10.48□□□□□ -0.73
MSH6-214ENST00000616033 GTSCR1Q86UQ5 136 aa10.48□□□□□ -0.73
MSH6-214ENST00000616033 TMEM75Q8N9X5 138 aa10.48□□□□□ -0.73
MSH6-214ENST00000616033 TMEM133Q9H2Q1 129 aa10.48□□□□□ -0.73
MSH6-214ENST00000616033 VMA21Q3ZAQ7 101 aa10.47□□□□□ -0.73
MSH6-214ENST00000616033 LYPD2Q6UXB3 125 aa10.47□□□□□ -0.73
MSH6-214ENST00000616033 Q8TAT8 98 aa10.47□□□□□ -0.73
MSH6-214ENST00000616033 RAI1Q7Z5J4 1906 aaPredicted RBP10.47□□□□□ -0.73
MSH6-214ENST00000616033 SMAD7O15105 426 aaKnown RBP10.47□□□□□ -0.73
MSH6-214ENST00000616033 RPL27AP46776 148 aaKnown RBP10.47□□□□□ -0.73
MSH6-214ENST00000616033 FXYD2P54710 66 aa10.47□□□□□ -0.73
MSH6-214ENST00000616033 CITED1Q99966 193 aa10.47□□□□□ -0.73
MSH6-214ENST00000616033 FBXL15Q9H469 300 aa10.47□□□□□ -0.73
MSH6-214ENST00000616033 ZNF71Q9NQZ8 489 aaPredicted RBP10.47□□□□□ -0.73
MSH6-214ENST00000616033 J3QR89 54 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms