RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 EDA2RQ9HAV5 297 aa15.29■□□□□ 0.04
SPAST-203ENST00000615843 SPANXA1Q9NS26 97 aa15.29■□□□□ 0.04
SPAST-203ENST00000615843 COLCA1Q6ZS62 124 aa15.29■□□□□ 0.04
SPAST-203ENST00000615843 SHANK2-AS3Q9BTD1 123 aa15.29■□□□□ 0.04
SPAST-203ENST00000615843 PPDPFLQ8WWR9 84 aa15.29■□□□□ 0.04
SPAST-203ENST00000615843 ATP6V0BQ99437 205 aa15.29■□□□□ 0.04
SPAST-203ENST00000615843 TMEM14BQ9NUH8 114 aa15.29■□□□□ 0.04
SPAST-203ENST00000615843 LGALS9BQ3B8N2 356 aa15.28■□□□□ 0.04
SPAST-203ENST00000615843 LGALS9CQ6DKI2 356 aa15.28■□□□□ 0.04
SPAST-203ENST00000615843 PLSCR4Q9NRQ2 329 aa15.28■□□□□ 0.04
SPAST-203ENST00000615843 GAGE12HA6NDE8 117 aa15.28■□□□□ 0.04
SPAST-203ENST00000615843 SRD5A1P18405 259 aa15.28■□□□□ 0.04
SPAST-203ENST00000615843 UNQ6494/PRO21346Q6UXR6 183 aa15.28■□□□□ 0.04
SPAST-203ENST00000615843 C9orf139Q6ZV77 190 aa15.28■□□□□ 0.04
SPAST-203ENST00000615843 TMEM75Q8N9X5 138 aa15.28■□□□□ 0.04
SPAST-203ENST00000615843 C11orf52Q96A22 123 aa15.28■□□□□ 0.04
SPAST-203ENST00000615843 XIRP1Q702N8 1843 aaKnown RBP15.28■□□□□ 0.04
SPAST-203ENST00000615843 HAX1O00165 279 aa15.28■□□□□ 0.04
SPAST-203ENST00000615843 LINC00158P58513 81 aa15.28■□□□□ 0.04
SPAST-203ENST00000615843 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.27■□□□□ 0.04
SPAST-203ENST00000615843 TRBV20-1A0A075B6N2 111 aa15.27■□□□□ 0.03
SPAST-203ENST00000615843 SRRM4A7MD48 611 aaKnown RBP15.27■□□□□ 0.03
SPAST-203ENST00000615843 Q6ZVH6 145 aa15.27■□□□□ 0.03
SPAST-203ENST00000615843 PRSS46E5RG02 174 aa15.27■□□□□ 0.03
SPAST-203ENST00000615843 PDE6HQ13956 83 aa15.27■□□□□ 0.03
SPAST-203ENST00000615843 IGLC7A0M8Q6 106 aa15.26■□□□□ 0.03
SPAST-203ENST00000615843 VWC2Q2TAL6 325 aa15.26■□□□□ 0.03
SPAST-203ENST00000615843 TMEM86BQ8N661 226 aa15.26■□□□□ 0.03
SPAST-203ENST00000615843 GATD1Q8NB37 220 aa15.26■□□□□ 0.03
SPAST-203ENST00000615843 CCL19Q99731 98 aa15.26■□□□□ 0.03
SPAST-203ENST00000615843 CRPP02741 224 aa15.26■□□□□ 0.03
SPAST-203ENST00000615843 MYLKQ15746 1914 aa15.26■□□□□ 0.03
SPAST-203ENST00000615843 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.26■□□□□ 0.03
SPAST-203ENST00000615843 TMEM178BH3BS89 294 aa15.26■□□□□ 0.03
SPAST-203ENST00000615843 LINC00477Q96M19 166 aa15.26■□□□□ 0.03
SPAST-203ENST00000615843 A0A1W2PPI3 338 aa15.26■□□□□ 0.03
SPAST-203ENST00000615843 NTN3O00634 580 aaPredicted RBP15.26■□□□□ 0.03
SPAST-203ENST00000615843 WISP1O95388 367 aa15.26■□□□□ 0.03
SPAST-203ENST00000615843 AZU1P20160 251 aa15.25■□□□□ 0.03
SPAST-203ENST00000615843 ZDBF2Q9HCK1 2354 aa15.25■□□□□ 0.03
SPAST-203ENST00000615843 Q0VFX4 171 aa15.25■□□□□ 0.03
SPAST-203ENST00000615843 C7orf69Q9H7B7 122 aa15.25■□□□□ 0.03
SPAST-203ENST00000615843 LINC00527Q9UJ94 153 aa15.25■□□□□ 0.03
SPAST-203ENST00000615843 CCL25O15444 150 aa15.25■□□□□ 0.03
SPAST-203ENST00000615843 ADARB2-AS1A8MUL3 147 aa15.24■□□□□ 0.03
SPAST-203ENST00000615843 C5orf64Q2M2E5 130 aa15.24■□□□□ 0.03
SPAST-203ENST00000615843 TRAV41A0A0B4J266 112 aa15.24■□□□□ 0.03
SPAST-203ENST00000615843 CSRP1P21291 193 aaKnown RBP15.24■□□□□ 0.03
SPAST-203ENST00000615843 PYGO2Q9BRQ0 406 aa15.24■□□□□ 0.03
SPAST-203ENST00000615843 TIMM21Q9BVV7 248 aa15.24■□□□□ 0.03
SPAST-203ENST00000615843 MALP21145 153 aa15.24■□□□□ 0.03
SPAST-203ENST00000615843 C9orf153Q5TBE3 101 aa15.24■□□□□ 0.03
SPAST-203ENST00000615843 Q8N8P6 123 aa15.24■□□□□ 0.03
SPAST-203ENST00000615843 ERCC8Q13216 396 aa15.23■□□□□ 0.03
SPAST-203ENST00000615843 ZNF524Q96C55 264 aa15.23■□□□□ 0.03
SPAST-203ENST00000615843 ABHD17AQ96GS6 310 aa15.23■□□□□ 0.03
SPAST-203ENST00000615843 PEMTQ9UBM1 199 aa15.23■□□□□ 0.03
SPAST-203ENST00000615843 H3BMM0 161 aa15.23■□□□□ 0.03
SPAST-203ENST00000615843 ETV2O00321 342 aaPredicted RBP15.23■□□□□ 0.03
SPAST-203ENST00000615843 LMO1P25800 156 aa15.23■□□□□ 0.03
SPAST-203ENST00000615843 MRPL51Q4U2R6 128 aaKnown RBP15.23■□□□□ 0.03
SPAST-203ENST00000615843 UBE2WQ96B02 151 aa15.23■□□□□ 0.03
SPAST-203ENST00000615843 SLC25A16P16260 332 aa15.23■□□□□ 0.03
SPAST-203ENST00000615843 NDPQ00604 133 aa15.23■□□□□ 0.03
SPAST-203ENST00000615843 C8orf49Q96NF6 230 aa15.23■□□□□ 0.03
SPAST-203ENST00000615843 RASL10AQ92737 203 aa15.22■□□□□ 0.03
SPAST-203ENST00000615843 LTBP1Q14766 1721 aa15.22■□□□□ 0.03
SPAST-203ENST00000615843 K7EN84 100 aa15.22■□□□□ 0.03
SPAST-203ENST00000615843 COX6B1P14854 86 aa15.22■□□□□ 0.03
SPAST-203ENST00000615843 BUB1B-PAK6H3BSN5 160 aa15.22■□□□□ 0.03
SPAST-203ENST00000615843 CEACAM8P31997 349 aaPredicted RBP15.22■□□□□ 0.03
SPAST-203ENST00000615843 TRPM7Q96QT4 1865 aa15.22■□□□□ 0.03
SPAST-203ENST00000615843 SPTBN1Q01082 2364 aaKnown RBP15.22■□□□□ 0.03
SPAST-203ENST00000615843 IGHV3-73A0A0B4J1V6 119 aa15.22■□□□□ 0.03
SPAST-203ENST00000615843 MYMXA0A1B0GTQ4 84 aa15.22■□□□□ 0.03
SPAST-203ENST00000615843 SIGLEC8Q9NYZ4 499 aa15.22■□□□□ 0.03
SPAST-203ENST00000615843 GAGE2AQ6NT46 116 aa15.21■□□□□ 0.03
SPAST-203ENST00000615843 SPXQ9BT56 116 aa15.21■□□□□ 0.03
SPAST-203ENST00000615843 NDUFA4L2Q9NRX3 87 aa15.21■□□□□ 0.03
SPAST-203ENST00000615843 H3BMG7 143 aa15.21■□□□□ 0.03
SPAST-203ENST00000615843 PAX4O43316 350 aa15.21■□□□□ 0.02
SPAST-203ENST00000615843 C2orf66Q6UXQ4 117 aa15.21■□□□□ 0.02
SPAST-203ENST00000615843 FAM168AQ92567 244 aa15.21■□□□□ 0.02
SPAST-203ENST00000615843 PLXNA3P51805 1871 aa15.21■□□□□ 0.02
SPAST-203ENST00000615843 KLRD1Q13241 179 aa15.2■□□□□ 0.02
SPAST-203ENST00000615843 STHQ8IWL8 128 aa15.2■□□□□ 0.02
SPAST-203ENST00000615843 K7ERJ3 54 aa15.2■□□□□ 0.02
SPAST-203ENST00000615843 THBDP07204 575 aa15.2■□□□□ 0.02
SPAST-203ENST00000615843 S100A7L2Q5SY68 101 aa15.2■□□□□ 0.02
SPAST-203ENST00000615843 CEND1Q8N111 149 aa15.2■□□□□ 0.02
SPAST-203ENST00000615843 ZNF48Q96MX3 618 aaPredicted RBP15.2■□□□□ 0.02
SPAST-203ENST00000615843 TRBV19A0A075B6N1 114 aa15.2■□□□□ 0.02
SPAST-203ENST00000615843 IGHV2-70DA0A0C4DH43 119 aa15.2■□□□□ 0.02
SPAST-203ENST00000615843 SIVA1O15304 175 aa15.2■□□□□ 0.02
SPAST-203ENST00000615843 NEGR1Q7Z3B1 354 aa15.2■□□□□ 0.02
SPAST-203ENST00000615843 ZNRD1Q9P1U0 126 aa15.2■□□□□ 0.02
SPAST-203ENST00000615843 DEFB125Q8N687 156 aa15.2■□□□□ 0.02
SPAST-203ENST00000615843 FER1L5A0AVI2 2057 aa15.19■□□□□ 0.02
SPAST-203ENST00000615843 ZNF672Q499Z4 452 aaPredicted RBP15.19■□□□□ 0.02
SPAST-203ENST00000615843 ASPHD1Q5U4P2 390 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms