RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 SPATA45Q537H7 98 aa7.75□□□□□ -1.17
TNFRSF9-204ENST00000615230 C8orf86Q6ZUL3 223 aa7.75□□□□□ -1.17
TNFRSF9-204ENST00000615230 AGMATQ9BSE5 352 aa7.75□□□□□ -1.17
TNFRSF9-204ENST00000615230 LENEPQ9Y5L5 61 aa7.75□□□□□ -1.17
TNFRSF9-204ENST00000615230 TRAV5A0A0B4J249 113 aa7.75□□□□□ -1.17
TNFRSF9-204ENST00000615230 ZNF134P52741 427 aa7.75□□□□□ -1.17
TNFRSF9-204ENST00000615230 IFITM2Q01629 132 aa7.75□□□□□ -1.17
TNFRSF9-204ENST00000615230 VWC2Q2TAL6 325 aa7.75□□□□□ -1.17
TNFRSF9-204ENST00000615230 TRBV7-9A0A0J9YWB2 115 aa7.74□□□□□ -1.17
TNFRSF9-204ENST00000615230 ZNF493Q6ZR52 646 aa7.74□□□□□ -1.17
TNFRSF9-204ENST00000615230 Q86TA4 180 aa7.74□□□□□ -1.17
TNFRSF9-204ENST00000615230 SIRPDQ9H106 197 aa7.74□□□□□ -1.17
TNFRSF9-204ENST00000615230 FAM231BA6NCW3 169 aa7.74□□□□□ -1.17
TNFRSF9-204ENST00000615230 GCSAMLQ5JQS6 135 aa7.74□□□□□ -1.17
TNFRSF9-204ENST00000615230 GUSBP1Q15486 140 aa7.74□□□□□ -1.17
TNFRSF9-204ENST00000615230 ZNF876PQ49A33 203 aa7.74□□□□□ -1.17
TNFRSF9-204ENST00000615230 AJUBAQ96IF1 538 aa7.74□□□□□ -1.17
TNFRSF9-204ENST00000615230 TRGC2P03986 189 aa7.74□□□□□ -1.17
TNFRSF9-204ENST00000615230 RPL23P62829 140 aaKnown RBP7.74□□□□□ -1.17
TNFRSF9-204ENST00000615230 RHOHQ15669 191 aa7.74□□□□□ -1.17
TNFRSF9-204ENST00000615230 CBLN2Q8IUK8 224 aa7.74□□□□□ -1.17
TNFRSF9-204ENST00000615230 XCL2Q9UBD3 114 aa7.74□□□□□ -1.17
TNFRSF9-204ENST00000615230 UQCR10Q9UDW1 63 aa7.74□□□□□ -1.17
TNFRSF9-204ENST00000615230 SMAD5-AS1Q9Y6J3 95 aa7.74□□□□□ -1.17
TNFRSF9-204ENST00000615230 A0A087X0M5 115 aa7.74□□□□□ -1.17
TNFRSF9-204ENST00000615230 A0A1B0GX30 115 aa7.74□□□□□ -1.17
TNFRSF9-204ENST00000615230 DPM2O94777 84 aa7.74□□□□□ -1.17
TNFRSF9-204ENST00000615230 SPART-AS1P0CW21 52 aa7.74□□□□□ -1.17
TNFRSF9-204ENST00000615230 RPL24P83731 157 aaKnown RBP7.74□□□□□ -1.17
TNFRSF9-204ENST00000615230 C5orf56Q8N8D9 126 aa7.74□□□□□ -1.17
TNFRSF9-204ENST00000615230 TMEM242Q9NWH2 141 aa7.74□□□□□ -1.17
TNFRSF9-204ENST00000615230 SCN2AQ99250 2005 aa7.73□□□□□ -1.17
TNFRSF9-204ENST00000615230 DNAJC9-AS1A6NH13 148 aa7.73□□□□□ -1.17
TNFRSF9-204ENST00000615230 NTF4P34130 210 aa7.73□□□□□ -1.17
TNFRSF9-204ENST00000615230 C11orf53Q8IXP5 236 aa7.73□□□□□ -1.17
TNFRSF9-204ENST00000615230 PHLDA1Q8WV24 401 aaPredicted RBP7.73□□□□□ -1.17
TNFRSF9-204ENST00000615230 DOCK8Q8NF50 2099 aa7.73□□□□□ -1.17
TNFRSF9-204ENST00000615230 COL5A1P20908 1838 aaPredicted RBP7.73□□□□□ -1.17
TNFRSF9-204ENST00000615230 NDUFS6O75380 124 aaKnown RBP7.73□□□□□ -1.17
TNFRSF9-204ENST00000615230 FABP2P12104 132 aa7.73□□□□□ -1.17
TNFRSF9-204ENST00000615230 EXOC3-AS1Q8N2X6 119 aa7.73□□□□□ -1.17
TNFRSF9-204ENST00000615230 C20orf144Q9BQM9 153 aa7.73□□□□□ -1.17
TNFRSF9-204ENST00000615230 ZNF561-AS1K7EIQ3 104 aa7.73□□□□□ -1.17
TNFRSF9-204ENST00000615230 ARL6IP6Q8N6S5 226 aa7.73□□□□□ -1.17
TNFRSF9-204ENST00000615230 F8WEM9 126 aa7.73□□□□□ -1.17
TNFRSF9-204ENST00000615230 CCL18P55774 89 aa7.73□□□□□ -1.17
TNFRSF9-204ENST00000615230 CT83Q5H943 113 aa7.73□□□□□ -1.17
TNFRSF9-204ENST00000615230 S100A7L2Q5SY68 101 aa7.73□□□□□ -1.17
TNFRSF9-204ENST00000615230 TMEM141Q96I45 108 aa7.73□□□□□ -1.17
TNFRSF9-204ENST00000615230 PYGO2Q9BRQ0 406 aa7.73□□□□□ -1.17
TNFRSF9-204ENST00000615230 ZNF106Q9H2Y7 1883 aaKnown RBP7.73□□□□□ -1.17
TNFRSF9-204ENST00000615230 TRBV19A0A075B6N1 114 aa7.72□□□□□ -1.17
TNFRSF9-204ENST00000615230 PLXND1Q9Y4D7 1925 aa7.72□□□□□ -1.17
TNFRSF9-204ENST00000615230 URB1O60287 2271 aaKnown RBP7.72□□□□□ -1.17
TNFRSF9-204ENST00000615230 A6NDX4 124 aa7.72□□□□□ -1.17
TNFRSF9-204ENST00000615230 M0R2P5 195 aa7.72□□□□□ -1.17
TNFRSF9-204ENST00000615230 Q6YL49 198 aa7.72□□□□□ -1.17
TNFRSF9-204ENST00000615230 DLX4Q92988 240 aaPredicted RBP7.72□□□□□ -1.17
TNFRSF9-204ENST00000615230 MS4A6AQ9H2W1 248 aa7.72□□□□□ -1.17
TNFRSF9-204ENST00000615230 GGTLC3B5MD39 225 aa7.72□□□□□ -1.17
TNFRSF9-204ENST00000615230 CDK2AP2O75956 126 aa7.72□□□□□ -1.17
TNFRSF9-204ENST00000615230 LINC00469Q8N7U9 141 aa7.72□□□□□ -1.17
TNFRSF9-204ENST00000615230 ICOSQ9Y6W8 199 aa7.72□□□□□ -1.17
TNFRSF9-204ENST00000615230 PLXNB3Q9ULL4 1909 aa7.72□□□□□ -1.17
TNFRSF9-204ENST00000615230 IGHV3-53P01767 116 aa7.72□□□□□ -1.17
TNFRSF9-204ENST00000615230 PLNP26678 52 aa7.72□□□□□ -1.17
TNFRSF9-204ENST00000615230 SLC17A3O00476 420 aa7.71□□□□□ -1.17
TNFRSF9-204ENST00000615230 WFDC12Q8WWY7 111 aa7.71□□□□□ -1.17
TNFRSF9-204ENST00000615230 WFDC1Q9HC57 220 aa7.71□□□□□ -1.17
TNFRSF9-204ENST00000615230 I3L3M4 83 aa7.71□□□□□ -1.17
TNFRSF9-204ENST00000615230 DUX4L9Q6RFH8 374 aaPredicted RBP7.71□□□□□ -1.17
TNFRSF9-204ENST00000615230 ARHGEF17Q96PE2 2063 aaPredicted RBP7.71□□□□□ -1.18
TNFRSF9-204ENST00000615230 IGKV1-6A0A0C4DH72 117 aa7.71□□□□□ -1.18
TNFRSF9-204ENST00000615230 NDUFS7O75251 213 aa7.71□□□□□ -1.18
TNFRSF9-204ENST00000615230 WIPF2Q8TF74 440 aaPredicted RBP7.71□□□□□ -1.18
TNFRSF9-204ENST00000615230 TMEM243Q9BU79 118 aa7.71□□□□□ -1.18
TNFRSF9-204ENST00000615230 PAX4O43316 350 aa7.71□□□□□ -1.18
TNFRSF9-204ENST00000615230 MEGF9Q9H1U4 602 aa7.71□□□□□ -1.18
TNFRSF9-204ENST00000615230 MUC22E2RYF6 1773 aaPredicted RBP7.71□□□□□ -1.18
TNFRSF9-204ENST00000615230 DENND4CQ5VZ89 1909 aa7.71□□□□□ -1.18
TNFRSF9-204ENST00000615230 TMEM238C9JI98 176 aa7.71□□□□□ -1.18
TNFRSF9-204ENST00000615230 IGHG2P01859 326 aa7.71□□□□□ -1.18
TNFRSF9-204ENST00000615230 PAX9P55771 341 aa7.71□□□□□ -1.18
TNFRSF9-204ENST00000615230 LYZL1Q6UWQ5 148 aa7.71□□□□□ -1.18
TNFRSF9-204ENST00000615230 ARID1BQ8NFD5 2236 aaPredicted RBP7.7□□□□□ -1.18
TNFRSF9-204ENST00000615230 GPHB5Q86YW7 130 aa7.7□□□□□ -1.18
TNFRSF9-204ENST00000615230 DNAJC30Q96LL9 226 aa7.7□□□□□ -1.18
TNFRSF9-204ENST00000615230 TM2D2Q9BX73 214 aa7.7□□□□□ -1.18
TNFRSF9-204ENST00000615230 SMIM13P0DJ93 91 aa7.7□□□□□ -1.18
TNFRSF9-204ENST00000615230 CBLN1P23435 193 aa7.7□□□□□ -1.18
TNFRSF9-204ENST00000615230 RNASE7Q9H1E1 156 aaKnown RBP7.7□□□□□ -1.18
TNFRSF9-204ENST00000615230 DENND4AQ7Z401 1863 aa7.7□□□□□ -1.18
TNFRSF9-204ENST00000615230 RSPO1Q2MKA7 263 aaPredicted RBP7.7□□□□□ -1.18
TNFRSF9-204ENST00000615230 PRSS46E5RG02 174 aa7.7□□□□□ -1.18
TNFRSF9-204ENST00000615230 NUP214P35658 2090 aaPredicted RBP7.7□□□□□ -1.18
TNFRSF9-204ENST00000615230 IGKCP01834 107 aa7.69□□□□□ -1.18
TNFRSF9-204ENST00000615230 ATP5G1P05496 136 aa7.69□□□□□ -1.18
TNFRSF9-204ENST00000615230 RNASE1P07998 156 aaKnown RBP7.69□□□□□ -1.18
TNFRSF9-204ENST00000615230 LINC00158P58513 81 aa7.69□□□□□ -1.18
TNFRSF9-204ENST00000615230 SFTA2Q6UW10 78 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms