RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 ZCCHC24Q8N2G6 241 aaKnown RBP3.72□□□□□ -1.81
CHD9-221ENST00000615216 IGHG3P01860 377 aa3.72□□□□□ -1.81
CHD9-221ENST00000615216 GAGE2BQ13066 116 aa3.72□□□□□ -1.81
CHD9-221ENST00000615216 RPP25LQ8N5L8 163 aaKnown RBP3.72□□□□□ -1.81
CHD9-221ENST00000615216 RNF114Q9Y508 228 aa3.72□□□□□ -1.81
CHD9-221ENST00000615216 DOCK10Q96BY6 2186 aa3.72□□□□□ -1.81
CHD9-221ENST00000615216 RNASE2P10153 161 aaKnown RBP3.72□□□□□ -1.81
CHD9-221ENST00000615216 Q0VG73 95 aa3.72□□□□□ -1.81
CHD9-221ENST00000615216 NSUN5P1Q3KNT7 163 aa3.72□□□□□ -1.81
CHD9-221ENST00000615216 DAZ1Q9NQZ3 744 aaKnown RBP3.72□□□□□ -1.81
CHD9-221ENST00000615216 CNOT1A5YKK6 2376 aaKnown RBP3.72□□□□□ -1.81
CHD9-221ENST00000615216 EFNA2O43921 213 aa3.72□□□□□ -1.81
CHD9-221ENST00000615216 Q0VFX4 171 aa3.72□□□□□ -1.81
CHD9-221ENST00000615216 SS18Q15532 418 aa3.72□□□□□ -1.81
CHD9-221ENST00000615216 UBE2DNLQ8IWF7 75 aa3.72□□□□□ -1.81
CHD9-221ENST00000615216 BCL6BQ8N143 479 aaPredicted RBP3.72□□□□□ -1.81
CHD9-221ENST00000615216 ANAPC10Q9UM13 185 aa3.72□□□□□ -1.81
CHD9-221ENST00000615216 CACNA1EQ15878 2313 aa3.72□□□□□ -1.81
CHD9-221ENST00000615216 PSPNO60542 156 aa3.72□□□□□ -1.81
CHD9-221ENST00000615216 TFF1P04155 84 aa3.72□□□□□ -1.81
CHD9-221ENST00000615216 NTF4P34130 210 aa3.72□□□□□ -1.81
CHD9-221ENST00000615216 GFI1BQ5VTD9 330 aa3.72□□□□□ -1.81
CHD9-221ENST00000615216 SSC4DQ8WTU2 575 aa3.72□□□□□ -1.81
CHD9-221ENST00000615216 LINC00473A8K010 186 aa3.72□□□□□ -1.81
CHD9-221ENST00000615216 PRSS46E5RG02 174 aa3.72□□□□□ -1.81
CHD9-221ENST00000615216 IGKV1D-17A0A075B6S4 117 aa3.72□□□□□ -1.81
CHD9-221ENST00000615216 TRGV1A0A0A0MS02 117 aa3.72□□□□□ -1.81
CHD9-221ENST00000615216 RIPPLY3P57055 190 aa3.72□□□□□ -1.81
CHD9-221ENST00000615216 C2orf82Q6UX34 121 aa3.72□□□□□ -1.81
CHD9-221ENST00000615216 HCFC1P51610 2035 aa3.72□□□□□ -1.81
CHD9-221ENST00000615216 RHODO00212 210 aa3.72□□□□□ -1.81
CHD9-221ENST00000615216 NCR2O95944 276 aa3.72□□□□□ -1.81
CHD9-221ENST00000615216 KIR3DS1Q14943 382 aa3.72□□□□□ -1.81
CHD9-221ENST00000615216 ZNF833PQ6ZTB9 187 aa3.72□□□□□ -1.81
CHD9-221ENST00000615216 CRIM1Q9NZV1 1036 aa3.72□□□□□ -1.81
CHD9-221ENST00000615216 CD24P25063 80 aa3.72□□□□□ -1.81
CHD9-221ENST00000615216 YPEL3P61236 119 aaPredicted RBP3.72□□□□□ -1.81
CHD9-221ENST00000615216 LSM4Q9Y4Z0 139 aaKnown RBP3.72□□□□□ -1.81
CHD9-221ENST00000615216 A0A087WX48 190 aa3.71□□□□□ -1.81
CHD9-221ENST00000615216 TRAV3A0A0B4J244 114 aa3.71□□□□□ -1.81
CHD9-221ENST00000615216 HAPLN4Q86UW8 402 aa3.71□□□□□ -1.81
CHD9-221ENST00000615216 LTBP2Q14767 1821 aa3.71□□□□□ -1.82
CHD9-221ENST00000615216 PAX4O43316 350 aa3.71□□□□□ -1.82
CHD9-221ENST00000615216 PPIFP30405 207 aaKnown RBP3.71□□□□□ -1.82
CHD9-221ENST00000615216 ACACAQ13085 2346 aa3.71□□□□□ -1.82
CHD9-221ENST00000615216 ZNF474Q6S9Z5 364 aaPredicted RBP3.71□□□□□ -1.82
CHD9-221ENST00000615216 GATD1Q8NB37 220 aa3.71□□□□□ -1.82
CHD9-221ENST00000615216 TMEM14CQ9P0S9 112 aa3.71□□□□□ -1.82
CHD9-221ENST00000615216 DYSFO75923 2080 aa3.71□□□□□ -1.82
CHD9-221ENST00000615216 SRD5A1P18405 259 aa3.71□□□□□ -1.82
CHD9-221ENST00000615216 IL17RELQ6ZVW7 336 aa3.71□□□□□ -1.82
CHD9-221ENST00000615216 LY6G5BQ8NDX9 201 aa3.71□□□□□ -1.82
CHD9-221ENST00000615216 TMEM158Q8WZ71 300 aa3.71□□□□□ -1.82
CHD9-221ENST00000615216 IGHV3-64A0A075B6Q5 118 aa3.71□□□□□ -1.82
CHD9-221ENST00000615216 KLRD1Q13241 179 aa3.71□□□□□ -1.82
CHD9-221ENST00000615216 UBE2V1Q13404 147 aa3.71□□□□□ -1.82
CHD9-221ENST00000615216 TMEM219Q86XT9 240 aa3.71□□□□□ -1.82
CHD9-221ENST00000615216 FAM110DQ8TAY7 271 aaPredicted RBP3.71□□□□□ -1.82
CHD9-221ENST00000615216 PRB3Q04118 309 aaPredicted RBP3.71□□□□□ -1.82
CHD9-221ENST00000615216 PIP4P2Q8N4L2 257 aa3.71□□□□□ -1.82
CHD9-221ENST00000615216 LAMTOR3Q9UHA4 124 aa3.71□□□□□ -1.82
CHD9-221ENST00000615216 LYNX1G3V0Z9 82 aa3.71□□□□□ -1.82
CHD9-221ENST00000615216 CD5LO43866 347 aa3.71□□□□□ -1.82
CHD9-221ENST00000615216 LYNX1P0DP58 116 aa3.71□□□□□ -1.82
CHD9-221ENST00000615216 ZNF876PQ49A33 203 aa3.71□□□□□ -1.82
CHD9-221ENST00000615216 OR11H6Q8NGC7 330 aa3.71□□□□□ -1.82
CHD9-221ENST00000615216 TRBV20-1A0A075B6N2 111 aa3.71□□□□□ -1.82
CHD9-221ENST00000615216 VWC2LB2RUY7 222 aa3.71□□□□□ -1.82
CHD9-221ENST00000615216 TNFRSF6BO95407 300 aa3.71□□□□□ -1.82
CHD9-221ENST00000615216 CD33P20138 364 aa3.71□□□□□ -1.82
CHD9-221ENST00000615216 ZNF124Q15973 351 aa3.71□□□□□ -1.82
CHD9-221ENST00000615216 SPAG8Q99932 426 aaPredicted RBP3.71□□□□□ -1.82
CHD9-221ENST00000615216 INAFM2P0DMQ5 153 aa3.7□□□□□ -1.82
CHD9-221ENST00000615216 hDV102S1A0JD36 115 aa3.7□□□□□ -1.82
CHD9-221ENST00000615216 ETV2O00321 342 aaPredicted RBP3.7□□□□□ -1.82
CHD9-221ENST00000615216 C3orf79P0CE67 100 aa3.7□□□□□ -1.82
CHD9-221ENST00000615216 I3L3M4 83 aa3.7□□□□□ -1.82
CHD9-221ENST00000615216 PFN1P07737 140 aaKnown RBP3.7□□□□□ -1.82
CHD9-221ENST00000615216 C10orf55Q5SWW7 151 aa3.7□□□□□ -1.82
CHD9-221ENST00000615216 KLHL30-AS1Q8NEE0 82 aa3.7□□□□□ -1.82
CHD9-221ENST00000615216 SMIM27A0A1W2PRY6 76 aa3.7□□□□□ -1.82
CHD9-221ENST00000615216 A6NNC1 897 aa3.7□□□□□ -1.82
CHD9-221ENST00000615216 H3BMM0 161 aa3.7□□□□□ -1.82
CHD9-221ENST00000615216 H3BUX3 64 aa3.7□□□□□ -1.82
CHD9-221ENST00000615216 DLEU1O43261 78 aa3.7□□□□□ -1.82
CHD9-221ENST00000615216 SELLP14151 372 aa3.7□□□□□ -1.82
CHD9-221ENST00000615216 PRTN3P24158 256 aa3.7□□□□□ -1.82
CHD9-221ENST00000615216 LMO1P25800 156 aa3.7□□□□□ -1.82
CHD9-221ENST00000615216 Q8N8P6 123 aa3.7□□□□□ -1.82
CHD9-221ENST00000615216 NDUFA4L2Q9NRX3 87 aa3.7□□□□□ -1.82
CHD9-221ENST00000615216 A0A087X0K7 114 aa3.7□□□□□ -1.82
CHD9-221ENST00000615216 FCN3O75636 299 aa3.7□□□□□ -1.82
CHD9-221ENST00000615216 UBE2E1P51965 193 aa3.7□□□□□ -1.82
CHD9-221ENST00000615216 C14orf178Q8N769 122 aaPredicted RBP3.7□□□□□ -1.82
CHD9-221ENST00000615216 HOXD3P31249 432 aaPredicted RBP3.7□□□□□ -1.82
CHD9-221ENST00000615216 C20orf144Q9BQM9 153 aa3.7□□□□□ -1.82
CHD9-221ENST00000615216 COX11Q9Y6N1 276 aa3.7□□□□□ -1.82
CHD9-221ENST00000615216 PCNX1Q96RV3 2341 aa3.7□□□□□ -1.82
CHD9-221ENST00000615216 KIAA1549Q9HCM3 1950 aa3.7□□□□□ -1.82
CHD9-221ENST00000615216 HGFACQ04756 655 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms