RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 RNF186Q9NXI6 227 aa4.34□□□□□ -1.71
CCL16-206ENST00000613642 PLXNA1Q9UIW2 1896 aa4.34□□□□□ -1.71
CCL16-206ENST00000613642 TNRC18O15417 2968 aaPredicted RBP4.34□□□□□ -1.72
CCL16-206ENST00000613642 BAZ2BQ9UIF8 2168 aaKnown RBP4.33□□□□□ -1.72
CCL16-206ENST00000613642 COL2A1P02458 1487 aaPredicted RBP4.33□□□□□ -1.72
CCL16-206ENST00000613642 IGHV3OR15-7A0A075B7D8 119 aa4.33□□□□□ -1.72
CCL16-206ENST00000613642 LINC01553A4QN01 128 aa4.33□□□□□ -1.72
CCL16-206ENST00000613642 TMEM202A6NGA9 273 aa4.33□□□□□ -1.72
CCL16-206ENST00000613642 C15orf62A8K5M9 175 aa4.33□□□□□ -1.72
CCL16-206ENST00000613642 HOXA3O43365 443 aaPredicted RBP4.33□□□□□ -1.72
CCL16-206ENST00000613642 LYPD3O95274 346 aa4.33□□□□□ -1.72
CCL16-206ENST00000613642 PPYP01298 95 aa4.33□□□□□ -1.72
CCL16-206ENST00000613642 PCBD1P61457 104 aa4.33□□□□□ -1.72
CCL16-206ENST00000613642 HERVK_113P61574 105 aa4.33□□□□□ -1.72
CCL16-206ENST00000613642 PAX8Q06710 450 aa4.33□□□□□ -1.72
CCL16-206ENST00000613642 TMEM52BQ4KMG9 183 aa4.33□□□□□ -1.72
CCL16-206ENST00000613642 PVRIGQ6DKI7 326 aa4.33□□□□□ -1.72
CCL16-206ENST00000613642 ZNF627Q7L945 461 aa4.33□□□□□ -1.72
CCL16-206ENST00000613642 COX8CQ7Z4L0 72 aa4.33□□□□□ -1.72
CCL16-206ENST00000613642 ATP5L2Q7Z4Y8 100 aa4.33□□□□□ -1.72
CCL16-206ENST00000613642 C5orf38Q86SI9 138 aa4.33□□□□□ -1.72
CCL16-206ENST00000613642 Q8N1Y9 231 aa4.33□□□□□ -1.72
CCL16-206ENST00000613642 ZNF799Q96GE5 643 aa4.33□□□□□ -1.72
CCL16-206ENST00000613642 UPK3BQ9BT76 320 aa4.33□□□□□ -1.72
CCL16-206ENST00000613642 C11orf1Q9H5F2 150 aa4.33□□□□□ -1.72
CCL16-206ENST00000613642 OSTCQ9NRP0 149 aa4.33□□□□□ -1.72
CCL16-206ENST00000613642 TP73-AS1Q9UF72 201 aa4.33□□□□□ -1.72
CCL16-206ENST00000613642 CKAP5Q14008 2032 aa4.33□□□□□ -1.72
CCL16-206ENST00000613642 TRBV5-7A0A0A0MS05 114 aa4.32□□□□□ -1.72
CCL16-206ENST00000613642 MED19A0JLT2 244 aaPredicted RBP4.32□□□□□ -1.72
CCL16-206ENST00000613642 C8orf87E5RJ46 101 aa4.32□□□□□ -1.72
CCL16-206ENST00000613642 UPK2O00526 184 aa4.32□□□□□ -1.72
CCL16-206ENST00000613642 FFAR1O14842 300 aa4.32□□□□□ -1.72
CCL16-206ENST00000613642 SLC25A20O43772 301 aa4.32□□□□□ -1.72
CCL16-206ENST00000613642 SS18L1O75177 396 aaPredicted RBP4.32□□□□□ -1.72
CCL16-206ENST00000613642 EPPINO95925 133 aa4.32□□□□□ -1.72
CCL16-206ENST00000613642 PSMB2P49721 201 aa4.32□□□□□ -1.72
CCL16-206ENST00000613642 LIM2P55344 173 aa4.32□□□□□ -1.72
CCL16-206ENST00000613642 LAGE3Q14657 143 aa4.32□□□□□ -1.72
CCL16-206ENST00000613642 ZNF726P1Q15940 193 aa4.32□□□□□ -1.72
CCL16-206ENST00000613642 ORMDL2Q53FV1 153 aa4.32□□□□□ -1.72
CCL16-206ENST00000613642 DEFB121Q5J5C9 76 aa4.32□□□□□ -1.72
CCL16-206ENST00000613642 MORN4Q8NDC4 146 aa4.32□□□□□ -1.72
CCL16-206ENST00000613642 OR5C1Q8NGR4 320 aa4.32□□□□□ -1.72
CCL16-206ENST00000613642 CXXC4Q9H2H0 198 aa4.32□□□□□ -1.72
CCL16-206ENST00000613642 DYNLRB1Q9NP97 96 aa4.32□□□□□ -1.72
CCL16-206ENST00000613642 SCN5AQ14524 2016 aa4.32□□□□□ -1.72
CCL16-206ENST00000613642 FANCMQ8IYD8 2048 aa4.32□□□□□ -1.72
CCL16-206ENST00000613642 HEATR5AQ86XA9 2040 aa4.31□□□□□ -1.72
CCL16-206ENST00000613642 WI2-2373I1.2A0A1W2PRP0 233 aa4.31□□□□□ -1.72
CCL16-206ENST00000613642 CRYM-AS1A6NIL9 109 aa4.31□□□□□ -1.72
CCL16-206ENST00000613642 SRRM4A7MD48 611 aaKnown RBP4.31□□□□□ -1.72
CCL16-206ENST00000613642 H3BMM0 161 aa4.31□□□□□ -1.72
CCL16-206ENST00000613642 UBE2L6O14933 153 aa4.31□□□□□ -1.72
CCL16-206ENST00000613642 CCL16O15467 120 aa4.31□□□□□ -1.72
CCL16-206ENST00000613642 SRSF10O75494 262 aaKnown RBP4.31□□□□□ -1.72
CCL16-206ENST00000613642 MGST1P10620 155 aaKnown RBP4.31□□□□□ -1.72
CCL16-206ENST00000613642 CD59P13987 128 aa4.31□□□□□ -1.72
CCL16-206ENST00000613642 ZNF134P52741 427 aa4.31□□□□□ -1.72
CCL16-206ENST00000613642 SNRPD3P62318 126 aaKnown RBP4.31□□□□□ -1.72
CCL16-206ENST00000613642 ZNF56Q15929 161 aa4.31□□□□□ -1.72
CCL16-206ENST00000613642 WDR86Q86TI4 376 aa4.31□□□□□ -1.72
CCL16-206ENST00000613642 STPG3Q8N7X2 389 aa4.31□□□□□ -1.72
CCL16-206ENST00000613642 RFESDQ8TAC1 157 aa4.31□□□□□ -1.72
CCL16-206ENST00000613642 UBE2WQ96B02 151 aa4.31□□□□□ -1.72
CCL16-206ENST00000613642 IFI27L1Q96BM0 104 aa4.31□□□□□ -1.72
CCL16-206ENST00000613642 WWC2-AS2Q96NR7 200 aa4.31□□□□□ -1.72
CCL16-206ENST00000613642 CALYQ9NYX4 217 aa4.31□□□□□ -1.72
CCL16-206ENST00000613642 CASP8AP2Q9UKL3 1982 aa4.31□□□□□ -1.72
CCL16-206ENST00000613642 A0A1B0GXF2 115 aa4.3□□□□□ -1.72
CCL16-206ENST00000613642 SMIM27A0A1W2PRY6 76 aa4.3□□□□□ -1.72
CCL16-206ENST00000613642 PATE3B3GLJ2 98 aa4.3□□□□□ -1.72
CCL16-206ENST00000613642 C11orf94C9JXX5 98 aa4.3□□□□□ -1.72
CCL16-206ENST00000613642 J3QT63 122 aa4.3□□□□□ -1.72
CCL16-206ENST00000613642 K7ERJ3 54 aa4.3□□□□□ -1.72
CCL16-206ENST00000613642 HBDP02042 147 aa4.3□□□□□ -1.72
CCL16-206ENST00000613642 DYNLT3P51808 116 aa4.3□□□□□ -1.72
CCL16-206ENST00000613642 ZNF136P52737 540 aa4.3□□□□□ -1.72
CCL16-206ENST00000613642 EFNA4P52798 201 aa4.3□□□□□ -1.72
CCL16-206ENST00000613642 RPL18Q07020 188 aaKnown RBP4.3□□□□□ -1.72
CCL16-206ENST00000613642 ZNF816Q0VGE8 651 aaPredicted RBP4.3□□□□□ -1.72
CCL16-206ENST00000613642 CENPWQ5EE01 88 aa4.3□□□□□ -1.72
CCL16-206ENST00000613642 FAM104BQ5XKR9 115 aa4.3□□□□□ -1.72
CCL16-206ENST00000613642 MARCH3Q86UD3 253 aa4.3□□□□□ -1.72
CCL16-206ENST00000613642 CNRIP1Q96F85 164 aaPredicted RBP4.3□□□□□ -1.72
CCL16-206ENST00000613642 C18orf12Q96KH6 178 aa4.3□□□□□ -1.72
CCL16-206ENST00000613642 METTL26Q96S19 204 aa4.3□□□□□ -1.72
CCL16-206ENST00000613642 PLA2G12AQ9BZM1 189 aa4.3□□□□□ -1.72
CCL16-206ENST00000613642 SLC25A15Q9Y619 301 aa4.3□□□□□ -1.72
CCL16-206ENST00000613642 ZNF236Q9UL36 1845 aa4.3□□□□□ -1.72
CCL16-206ENST00000613642 DOCK6Q96HP0 2047 aa4.29□□□□□ -1.72
CCL16-206ENST00000613642 SHROOM3Q8TF72 1996 aa4.29□□□□□ -1.72
CCL16-206ENST00000613642 VWA8A3KMH1 1905 aa4.29□□□□□ -1.72
CCL16-206ENST00000613642 A0A0D9SEW6 157 aa4.29□□□□□ -1.72
CCL16-206ENST00000613642 TRBV27A0A0K0K1C4 114 aa4.29□□□□□ -1.72
CCL16-206ENST00000613642 DDTLA6NHG4 134 aaPredicted RBP4.29□□□□□ -1.72
CCL16-206ENST00000613642 C17orf51A8MQB3 221 aa4.29□□□□□ -1.72
CCL16-206ENST00000613642 INS-IGF2F8WCM5 200 aa4.29□□□□□ -1.72
CCL16-206ENST00000613642 CCL24O00175 119 aa4.29□□□□□ -1.72
CCL16-206ENST00000613642 NDUFC1O43677 76 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms