RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 M0QZ24 198 aa13.31□□□□□ -0.28
SREK1-216ENST00000612404 OVOL1O14753 267 aa13.31□□□□□ -0.28
SREK1-216ENST00000612404 TAGLN2P37802 199 aaKnown RBP13.31□□□□□ -0.28
SREK1-216ENST00000612404 MEF2BQ02080 365 aaPredicted RBP13.31□□□□□ -0.28
SREK1-216ENST00000612404 TRBV19A0A075B6N1 114 aa13.31□□□□□ -0.28
SREK1-216ENST00000612404 ATP5G3P48201 142 aa13.31□□□□□ -0.28
SREK1-216ENST00000612404 EIF4E3Q8N5X7 224 aaKnown RBP13.31□□□□□ -0.28
SREK1-216ENST00000612404 CD5P06127 495 aa13.3□□□□□ -0.28
SREK1-216ENST00000612404 UQCC3Q6UW78 93 aa13.3□□□□□ -0.28
SREK1-216ENST00000612404 C3orf56Q8N813 242 aa13.3□□□□□ -0.28
SREK1-216ENST00000612404 IGKV3-7A0A075B6H7 116 aa13.3□□□□□ -0.28
SREK1-216ENST00000612404 A0A1W2PRE2 83 aa13.3□□□□□ -0.28
SREK1-216ENST00000612404 SLC17A3O00476 420 aa13.3□□□□□ -0.28
SREK1-216ENST00000612404 TCF24Q7RTU0 167 aa13.3□□□□□ -0.28
SREK1-216ENST00000612404 ARL2-SNX15V9GYD0 113 aa13.3□□□□□ -0.28
SREK1-216ENST00000612404 HELTA6NFD8 242 aa13.29□□□□□ -0.28
SREK1-216ENST00000612404 GGTLC3B5MD39 225 aa13.29□□□□□ -0.28
SREK1-216ENST00000612404 CEBPGP53567 150 aa13.29□□□□□ -0.28
SREK1-216ENST00000612404 CD81P60033 236 aa13.29□□□□□ -0.28
SREK1-216ENST00000612404 SUMO1P63165 101 aaKnown RBP13.29□□□□□ -0.28
SREK1-216ENST00000612404 C12orf54Q6X4T0 127 aa13.29□□□□□ -0.28
SREK1-216ENST00000612404 ADAMTSL5Q6ZMM2 481 aa13.29□□□□□ -0.28
SREK1-216ENST00000612404 MLXQ9UH92 298 aa13.29□□□□□ -0.28
SREK1-216ENST00000612404 C9JQL5 133 aa13.28□□□□□ -0.28
SREK1-216ENST00000612404 NDUFB4O95168 129 aa13.28□□□□□ -0.28
SREK1-216ENST00000612404 CSN3P07498 182 aa13.28□□□□□ -0.28
SREK1-216ENST00000612404 Q9H3A6 140 aa13.28□□□□□ -0.28
SREK1-216ENST00000612404 A0A087X0K7 114 aa13.28□□□□□ -0.28
SREK1-216ENST00000612404 PDE6HQ13956 83 aa13.28□□□□□ -0.28
SREK1-216ENST00000612404 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.28□□□□□ -0.28
SREK1-216ENST00000612404 EXOC3-AS1Q8N2X6 119 aa13.28□□□□□ -0.28
SREK1-216ENST00000612404 ZNF747Q9BV97 191 aa13.28□□□□□ -0.28
SREK1-216ENST00000612404 PGPA6NDG6 321 aa13.27□□□□□ -0.28
SREK1-216ENST00000612404 DYNLRB2Q8TF09 96 aa13.27□□□□□ -0.28
SREK1-216ENST00000612404 TXNDC17Q9BRA2 123 aa13.27□□□□□ -0.28
SREK1-216ENST00000612404 NKX6-2Q9C056 277 aaPredicted RBP13.27□□□□□ -0.28
SREK1-216ENST00000612404 GBGT1Q8N5D6 347 aa13.27□□□□□ -0.29
SREK1-216ENST00000612404 SMDT1Q9H4I9 107 aa13.27□□□□□ -0.29
SREK1-216ENST00000612404 AAMDCQ9H7C9 122 aa13.27□□□□□ -0.29
SREK1-216ENST00000612404 MEOX2P50222 304 aa13.26□□□□□ -0.29
SREK1-216ENST00000612404 PSG9Q00887 426 aa13.26□□□□□ -0.29
SREK1-216ENST00000612404 IGFL4Q6B9Z1 124 aa13.26□□□□□ -0.29
SREK1-216ENST00000612404 SLC35B3Q9H1N7 401 aa13.26□□□□□ -0.29
SREK1-216ENST00000612404 NRN1Q9NPD7 142 aa13.26□□□□□ -0.29
SREK1-216ENST00000612404 PDE6DO43924 150 aa13.25□□□□□ -0.29
SREK1-216ENST00000612404 SLC25A5P05141 298 aaKnown RBP13.25□□□□□ -0.29
SREK1-216ENST00000612404 SRP19P09132 144 aaKnown RBP13.25□□□□□ -0.29
SREK1-216ENST00000612404 SFTA3P0C7M3 94 aa13.25□□□□□ -0.29
SREK1-216ENST00000612404 LYPD1Q8N2G4 141 aa13.25□□□□□ -0.29
SREK1-216ENST00000612404 CYB561D1Q8N8Q1 229 aa13.25□□□□□ -0.29
SREK1-216ENST00000612404 OTORQ9NRC9 128 aa13.25□□□□□ -0.29
SREK1-216ENST00000612404 FAM90A2PQ658T7 463 aa13.25□□□□□ -0.29
SREK1-216ENST00000612404 CCDC28AQ8IWP9 274 aa13.25□□□□□ -0.29
SREK1-216ENST00000612404 LINC00482Q8N8I6 264 aa13.25□□□□□ -0.29
SREK1-216ENST00000612404 C16orf92Q96LL3 132 aa13.25□□□□□ -0.29
SREK1-216ENST00000612404 ZNF331Q9NQX6 463 aaPredicted RBP13.25□□□□□ -0.29
SREK1-216ENST00000612404 RPH3ALQ9UNE2 315 aa13.25□□□□□ -0.29
SREK1-216ENST00000612404 TRRAPQ9Y4A5 3859 aa13.24□□□□□ -0.29
SREK1-216ENST00000612404 SCO2A0A1W2PP80 73 aa13.24□□□□□ -0.29
SREK1-216ENST00000612404 ZNF253O75346 499 aa13.24□□□□□ -0.29
SREK1-216ENST00000612404 SAP30O75446 220 aa13.24□□□□□ -0.29
SREK1-216ENST00000612404 TMEM218A2RU14 115 aa13.24□□□□□ -0.29
SREK1-216ENST00000612404 F6UZH7 168 aa13.24□□□□□ -0.29
SREK1-216ENST00000612404 TFPI2P48307 235 aa13.24□□□□□ -0.29
SREK1-216ENST00000612404 WFDC3Q8IUB2 231 aa13.24□□□□□ -0.29
SREK1-216ENST00000612404 LURAP1LQ8IV03 231 aa13.24□□□□□ -0.29
SREK1-216ENST00000612404 RNF182Q8N6D2 247 aa13.24□□□□□ -0.29
SREK1-216ENST00000612404 CMTM2Q8TAZ6 248 aa13.24□□□□□ -0.29
SREK1-216ENST00000612404 SLC50A1Q9BRV3 221 aa13.24□□□□□ -0.29
SREK1-216ENST00000612404 DNASE2O00115 360 aaPredicted RBP13.23□□□□□ -0.29
SREK1-216ENST00000612404 PRB4P10163 310 aaPredicted RBP13.23□□□□□ -0.29
SREK1-216ENST00000612404 GNG5P63218 68 aa13.23□□□□□ -0.29
SREK1-216ENST00000612404 SHISA2Q6UWI4 295 aa13.23□□□□□ -0.29
SREK1-216ENST00000612404 RBPMS2Q6ZRY4 209 aaKnown RBP13.23□□□□□ -0.29
SREK1-216ENST00000612404 MS4A6AQ9H2W1 248 aa13.23□□□□□ -0.29
SREK1-216ENST00000612404 TMEM250H0YL14 139 aa13.22□□□□□ -0.29
SREK1-216ENST00000612404 M0R3E3 92 aa13.22□□□□□ -0.29
SREK1-216ENST00000612404 HLA-DMBP28068 263 aa13.22□□□□□ -0.29
SREK1-216ENST00000612404 DEFB114Q30KQ6 69 aa13.22□□□□□ -0.29
SREK1-216ENST00000612404 C5orf17Q8NAS9 161 aa13.22□□□□□ -0.29
SREK1-216ENST00000612404 RPUSD4Q96CM3 377 aaKnown RBP13.22□□□□□ -0.29
SREK1-216ENST00000612404 SIGLEC8Q9NYZ4 499 aa13.22□□□□□ -0.29
SREK1-216ENST00000612404 EPDR1Q9UM22 224 aa13.22□□□□□ -0.29
SREK1-216ENST00000612404 TRAV8-2A0A0B4J237 113 aa13.21□□□□□ -0.29
SREK1-216ENST00000612404 ZNF674Q2M3X9 581 aa13.21□□□□□ -0.29
SREK1-216ENST00000612404 CD300EQ496F6 205 aaPredicted RBP13.21□□□□□ -0.29
SREK1-216ENST00000612404 SOHLH1Q5JUK2 328 aa13.21□□□□□ -0.29
SREK1-216ENST00000612404 TMEM61Q8N0U2 210 aa13.21□□□□□ -0.29
SREK1-216ENST00000612404 F8W036 122 aa13.21□□□□□ -0.3
SREK1-216ENST00000612404 PAFAH1B2P68402 229 aa13.21□□□□□ -0.3
SREK1-216ENST00000612404 LINC00052Q96N35 136 aa13.21□□□□□ -0.3
SREK1-216ENST00000612404 PEX7O00628 323 aa13.2□□□□□ -0.3
SREK1-216ENST00000612404 SOCS3O14543 225 aa13.2□□□□□ -0.3
SREK1-216ENST00000612404 CSN1S1P47710 185 aa13.2□□□□□ -0.3
SREK1-216ENST00000612404 DCANP1Q8TF63 244 aa13.2□□□□□ -0.3
SREK1-216ENST00000612404 TCEAL7Q9BRU2 100 aa13.2□□□□□ -0.3
SREK1-216ENST00000612404 DERL1Q9BUN8 251 aa13.2□□□□□ -0.3
SREK1-216ENST00000612404 ZNF705FA8MVS1 300 aaPredicted RBP13.19□□□□□ -0.3
SREK1-216ENST00000612404 NDUFS6O75380 124 aaKnown RBP13.19□□□□□ -0.3
SREK1-216ENST00000612404 HIST1H2BAQ96A08 127 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms