RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 PLAC8L1A1L4L8 177 aa12.52□□□□□ -0.41
SSBP1-215ENST00000612337 FNDC10F2Z333 226 aa12.52□□□□□ -0.41
SSBP1-215ENST00000612337 OR5G3P0C626 314 aa12.52□□□□□ -0.41
SSBP1-215ENST00000612337 CXCL3P19876 107 aa12.52□□□□□ -0.41
SSBP1-215ENST00000612337 RRAS2P62070 204 aaPredicted RBP12.52□□□□□ -0.41
SSBP1-215ENST00000612337 DLK1P80370 383 aa12.52□□□□□ -0.41
SSBP1-215ENST00000612337 HIST1H1AQ02539 215 aaPredicted RBP12.52□□□□□ -0.41
SSBP1-215ENST00000612337 TMEM14EPQ6UXP3 125 aa12.52□□□□□ -0.41
SSBP1-215ENST00000612337 OR8A1Q8NGG7 326 aa12.52□□□□□ -0.41
SSBP1-215ENST00000612337 NPVFQ9HCQ7 196 aa12.52□□□□□ -0.41
SSBP1-215ENST00000612337 K7EPK0 472 aa12.51□□□□□ -0.41
SSBP1-215ENST00000612337 LYRM1O43325 122 aa12.51□□□□□ -0.41
SSBP1-215ENST00000612337 CCNKO75909 580 aa12.51□□□□□ -0.41
SSBP1-215ENST00000612337 DEFB130BP0DP73 79 aa12.51□□□□□ -0.41
SSBP1-215ENST00000612337 DEFB130AP0DP74 79 aa12.51□□□□□ -0.41
SSBP1-215ENST00000612337 AZU1P20160 251 aa12.51□□□□□ -0.41
SSBP1-215ENST00000612337 RHOBP62745 196 aa12.51□□□□□ -0.41
SSBP1-215ENST00000612337 PSG3Q16557 428 aa12.51□□□□□ -0.41
SSBP1-215ENST00000612337 C1orf134Q5TEV5 83 aa12.51□□□□□ -0.41
SSBP1-215ENST00000612337 TMEM256Q8N2U0 113 aa12.51□□□□□ -0.41
SSBP1-215ENST00000612337 ARL6Q9H0F7 186 aa12.51□□□□□ -0.41
SSBP1-215ENST00000612337 RNF24Q9Y225 148 aa12.51□□□□□ -0.41
SSBP1-215ENST00000612337 METTL15P1P0C7V9 234 aa12.5□□□□□ -0.41
SSBP1-215ENST00000612337 TEPPQ6URK8 271 aa12.5□□□□□ -0.41
SSBP1-215ENST00000612337 PATE2Q6UY27 113 aa12.5□□□□□ -0.41
SSBP1-215ENST00000612337 LRRC20Q8TCA0 184 aa12.5□□□□□ -0.41
SSBP1-215ENST00000612337 MITD1Q8WV92 249 aa12.5□□□□□ -0.41
SSBP1-215ENST00000612337 LINC01587Q99440 93 aa12.5□□□□□ -0.41
SSBP1-215ENST00000612337 ATG101Q9BSB4 218 aa12.5□□□□□ -0.41
SSBP1-215ENST00000612337 ARV1Q9H2C2 271 aa12.5□□□□□ -0.41
SSBP1-215ENST00000612337 PPP1R14DQ9NXH3 145 aa12.5□□□□□ -0.41
SSBP1-215ENST00000612337 MGAT4CQ9UBM8 478 aa12.5□□□□□ -0.41
SSBP1-215ENST00000612337 MRPS12O15235 138 aaKnown RBP12.49□□□□□ -0.41
SSBP1-215ENST00000612337 TSC22D2O75157 780 aa12.49□□□□□ -0.41
SSBP1-215ENST00000612337 TAS2R60P59551 318 aa12.49□□□□□ -0.41
SSBP1-215ENST00000612337 PXDC1Q5TGL8 231 aa12.49□□□□□ -0.41
SSBP1-215ENST00000612337 OR10P1Q8NGE3 313 aa12.49□□□□□ -0.41
SSBP1-215ENST00000612337 C20orf85Q9H1P6 137 aa12.49□□□□□ -0.41
SSBP1-215ENST00000612337 F5H768 121 aa12.48□□□□□ -0.41
SSBP1-215ENST00000612337 SCGB1D2O95969 90 aa12.48□□□□□ -0.41
SSBP1-215ENST00000612337 TCRBP04435 133 aa12.48□□□□□ -0.41
SSBP1-215ENST00000612337 ATP5G1P05496 136 aa12.48□□□□□ -0.41
SSBP1-215ENST00000612337 CXCL2P19875 107 aa12.48□□□□□ -0.41
SSBP1-215ENST00000612337 ATP5G3P48201 142 aa12.48□□□□□ -0.41
SSBP1-215ENST00000612337 TAS2R30P59541 319 aa12.48□□□□□ -0.41
SSBP1-215ENST00000612337 SLC38A11Q08AI6 406 aa12.48□□□□□ -0.41
SSBP1-215ENST00000612337 FCN2Q15485 313 aa12.48□□□□□ -0.41
SSBP1-215ENST00000612337 IAH1Q2TAA2 248 aaPredicted RBP12.48□□□□□ -0.41
SSBP1-215ENST00000612337 LINC00299Q6ZSB3 139 aa12.48□□□□□ -0.41
SSBP1-215ENST00000612337 RPUSD4Q96CM3 377 aaKnown RBP12.48□□□□□ -0.41
SSBP1-215ENST00000612337 CCDC32Q9BV29 185 aa12.48□□□□□ -0.41
SSBP1-215ENST00000612337 CBY3A6NI87 242 aa12.47□□□□□ -0.41
SSBP1-215ENST00000612337 CDKN1BP46527 198 aa12.47□□□□□ -0.41
SSBP1-215ENST00000612337 LCN15Q6UWW0 184 aa12.47□□□□□ -0.41
SSBP1-215ENST00000612337 ZNF546Q86UE3 836 aa12.47□□□□□ -0.41
SSBP1-215ENST00000612337 ZBTB8BQ8NAP8 495 aaPredicted RBP12.47□□□□□ -0.41
SSBP1-215ENST00000612337 C16orf74Q96GX8 76 aa12.47□□□□□ -0.41
SSBP1-215ENST00000612337 GGACTQ9BVM4 153 aa12.47□□□□□ -0.41
SSBP1-215ENST00000612337 RCL1Q9Y2P8 373 aaKnown RBP12.47□□□□□ -0.41
SSBP1-215ENST00000612337 DNAH5Q8TE73 4624 aa12.46□□□□□ -0.41
SSBP1-215ENST00000612337 TRAV6A0A075B6T7 132 aa12.46□□□□□ -0.41
SSBP1-215ENST00000612337 GOSR2O14653 212 aa12.46□□□□□ -0.41
SSBP1-215ENST00000612337 LINC00305Q7Z4B0 112 aa12.46□□□□□ -0.41
SSBP1-215ENST00000612337 ZNF575Q86XF7 245 aa12.46□□□□□ -0.41
SSBP1-215ENST00000612337 SLC50A1Q9BRV3 221 aa12.46□□□□□ -0.41
SSBP1-215ENST00000612337 ZNF331Q9NQX6 463 aaPredicted RBP12.46□□□□□ -0.41
SSBP1-215ENST00000612337 GSKIPQ9P0R6 139 aa12.46□□□□□ -0.41
SSBP1-215ENST00000612337 TIMM8BQ9Y5J9 83 aaPredicted RBP12.46□□□□□ -0.41
SSBP1-215ENST00000612337 AGPAT2O15120 278 aa12.45□□□□□ -0.42
SSBP1-215ENST00000612337 NUDT3O95989 172 aa12.45□□□□□ -0.42
SSBP1-215ENST00000612337 PRB4P10163 310 aaPredicted RBP12.45□□□□□ -0.42
SSBP1-215ENST00000612337 HTN1P15515 57 aa12.45□□□□□ -0.42
SSBP1-215ENST00000612337 ARL16Q0P5N6 197 aa12.45□□□□□ -0.42
SSBP1-215ENST00000612337 ZNF493Q6ZR52 646 aa12.45□□□□□ -0.42
SSBP1-215ENST00000612337 ZNRF2Q8NHG8 242 aa12.45□□□□□ -0.42
SSBP1-215ENST00000612337 RNASE8Q8TDE3 154 aaKnown RBP12.45□□□□□ -0.42
SSBP1-215ENST00000612337 TMEM263Q8WUH6 116 aaKnown RBP12.45□□□□□ -0.42
SSBP1-215ENST00000612337 APOBP04114 4563 aaKnown RBP12.45□□□□□ -0.42
SSBP1-215ENST00000612337 NBDYA0A0U1RRE5 68 aa12.44□□□□□ -0.42
SSBP1-215ENST00000612337 C7orf66A4D0T2 115 aa12.44□□□□□ -0.42
SSBP1-215ENST00000612337 H7BYZ3 331 aa12.44□□□□□ -0.42
SSBP1-215ENST00000612337 BPIFA4PQ86YQ2 179 aa12.44□□□□□ -0.42
SSBP1-215ENST00000612337 S100ZQ8WXG8 99 aa12.44□□□□□ -0.42
SSBP1-215ENST00000612337 C20orf144Q9BQM9 153 aa12.44□□□□□ -0.42
SSBP1-215ENST00000612337 NUDT15Q9NV35 164 aa12.44□□□□□ -0.42
SSBP1-215ENST00000612337 MBPP02686 304 aaPredicted RBP12.43□□□□□ -0.42
SSBP1-215ENST00000612337 CCL18P55774 89 aa12.43□□□□□ -0.42
SSBP1-215ENST00000612337 ZNF431Q8TF32 576 aaPredicted RBP12.43□□□□□ -0.42
SSBP1-215ENST00000612337 RNF141Q8WVD5 230 aa12.43□□□□□ -0.42
SSBP1-215ENST00000612337 TMEM37Q8WXS4 190 aa12.43□□□□□ -0.42
SSBP1-215ENST00000612337 MGST2Q99735 147 aa12.43□□□□□ -0.42
SSBP1-215ENST00000612337 NOP10Q9NPE3 64 aaKnown RBP12.43□□□□□ -0.42
SSBP1-215ENST00000612337 A6NHS1 94 aa12.42□□□□□ -0.42
SSBP1-215ENST00000612337 CCSO14618 274 aa12.42□□□□□ -0.42
SSBP1-215ENST00000612337 COX7A2P2O60397 106 aa12.42□□□□□ -0.42
SSBP1-215ENST00000612337 SNRPCP09234 159 aaKnown RBP12.42□□□□□ -0.42
SSBP1-215ENST00000612337 H2AFB2P0C5Z0 115 aa12.42□□□□□ -0.42
SSBP1-215ENST00000612337 ZNF846Q147U1 533 aa12.42□□□□□ -0.42
SSBP1-215ENST00000612337 SEC22CQ9BRL7 303 aa12.42□□□□□ -0.42
SSBP1-215ENST00000612337 LINC00588Q9Y4M8 146 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms