RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 IGKV2-40A0A087WW87 121 aaPredicted RBP11.12□□□□□ -0.63
COL6A1-207ENST00000612273 IGHV3-66A0A0C4DH42 116 aa11.12□□□□□ -0.63
COL6A1-207ENST00000612273 GNG7O60262 68 aa11.12□□□□□ -0.63
COL6A1-207ENST00000612273 IGKV2D-40P01614 121 aaPredicted RBP11.12□□□□□ -0.63
COL6A1-207ENST00000612273 UQCRFS1P47985 274 aa11.12□□□□□ -0.63
COL6A1-207ENST00000612273 KLF5Q13887 457 aaPredicted RBP11.12□□□□□ -0.63
COL6A1-207ENST00000612273 MUC15Q8N387 334 aa11.12□□□□□ -0.63
COL6A1-207ENST00000612273 Q8NA96 180 aa11.12□□□□□ -0.63
COL6A1-207ENST00000612273 PRSS22Q9GZN4 317 aa11.12□□□□□ -0.63
COL6A1-207ENST00000612273 NGBQ9NPG2 151 aa11.12□□□□□ -0.63
COL6A1-207ENST00000612273 A0A1B0GUT8 65 aa11.11□□□□□ -0.63
COL6A1-207ENST00000612273 GAGE1Q13065 139 aa11.11□□□□□ -0.63
COL6A1-207ENST00000612273 BPIFA4PQ86YQ2 179 aa11.11□□□□□ -0.63
COL6A1-207ENST00000612273 OR4C5Q8NGB2 326 aa11.11□□□□□ -0.63
COL6A1-207ENST00000612273 MAP1LC3CQ9BXW4 147 aa11.11□□□□□ -0.63
COL6A1-207ENST00000612273 NCR2O95944 276 aa11.11□□□□□ -0.63
COL6A1-207ENST00000612273 IGLV1-47P01700 117 aa11.11□□□□□ -0.63
COL6A1-207ENST00000612273 CD3EP07766 207 aa11.11□□□□□ -0.63
COL6A1-207ENST00000612273 HLA-DMBP28068 263 aa11.11□□□□□ -0.63
COL6A1-207ENST00000612273 RASL11AQ6T310 242 aa11.11□□□□□ -0.63
COL6A1-207ENST00000612273 ASCL5Q7RTU5 278 aa11.11□□□□□ -0.63
COL6A1-207ENST00000612273 ATP5L2Q7Z4Y8 100 aa11.11□□□□□ -0.63
COL6A1-207ENST00000612273 PSG8Q9UQ74 426 aa11.11□□□□□ -0.63
COL6A1-207ENST00000612273 IGHV3-49A0A0A0MS15 119 aa11.11□□□□□ -0.63
COL6A1-207ENST00000612273 IGLV2-11P01706 119 aa11.11□□□□□ -0.63
COL6A1-207ENST00000612273 PPIFP30405 207 aaKnown RBP11.11□□□□□ -0.63
COL6A1-207ENST00000612273 FA2HQ7L5A8 372 aa11.11□□□□□ -0.63
COL6A1-207ENST00000612273 LINC00311Q8N616 119 aa11.11□□□□□ -0.63
COL6A1-207ENST00000612273 TMEM75Q8N9X5 138 aa11.11□□□□□ -0.63
COL6A1-207ENST00000612273 COX11Q9Y6N1 276 aa11.11□□□□□ -0.63
COL6A1-207ENST00000612273 OR2T8A6NH00 312 aa11.1□□□□□ -0.63
COL6A1-207ENST00000612273 ZNF785A8K8V0 405 aa11.1□□□□□ -0.63
COL6A1-207ENST00000612273 HLA-DRB1P01911 266 aa11.1□□□□□ -0.63
COL6A1-207ENST00000612273 IFI27P40305 119 aaPredicted RBP11.1□□□□□ -0.63
COL6A1-207ENST00000612273 FOXC1Q12948 553 aa11.1□□□□□ -0.63
COL6A1-207ENST00000612273 AMN1Q8IY45 258 aa11.1□□□□□ -0.63
COL6A1-207ENST00000612273 RNF125Q96EQ8 232 aa11.1□□□□□ -0.63
COL6A1-207ENST00000612273 OTORQ9NRC9 128 aa11.1□□□□□ -0.63
COL6A1-207ENST00000612273 AP5S1Q9NUS5 200 aa11.1□□□□□ -0.63
COL6A1-207ENST00000612273 C3orf36Q3SXR2 165 aa11.1□□□□□ -0.63
COL6A1-207ENST00000612273 TMEM191AQ9H0A3 160 aa11.1□□□□□ -0.63
COL6A1-207ENST00000612273 HRNRQ86YZ3 2850 aaPredicted RBP11.1□□□□□ -0.63
COL6A1-207ENST00000612273 I3L2K1 104 aa11.1□□□□□ -0.63
COL6A1-207ENST00000612273 CT45A10P0DMU9 189 aa11.1□□□□□ -0.63
COL6A1-207ENST00000612273 CRIP1P50238 77 aa11.1□□□□□ -0.63
COL6A1-207ENST00000612273 SLC25A34Q6PIV7 304 aa11.1□□□□□ -0.63
COL6A1-207ENST00000612273 SCNM1Q9BWG6 230 aa11.1□□□□□ -0.63
COL6A1-207ENST00000612273 INS-IGF2F8WCM5 200 aa11.09□□□□□ -0.63
COL6A1-207ENST00000612273 K7EIM0 57 aa11.09□□□□□ -0.63
COL6A1-207ENST00000612273 APOBEC3AP31941 199 aaPredicted RBP11.09□□□□□ -0.63
COL6A1-207ENST00000612273 TRBV19A0A075B6N1 114 aa11.09□□□□□ -0.63
COL6A1-207ENST00000612273 NPIPB5A8MRT5 1133 aa11.09□□□□□ -0.63
COL6A1-207ENST00000612273 TNFRSF13BO14836 293 aaPredicted RBP11.09□□□□□ -0.63
COL6A1-207ENST00000612273 OR5AL1P0C617 328 aa11.09□□□□□ -0.63
COL6A1-207ENST00000612273 D6R8Y8 96 aa11.08□□□□□ -0.64
COL6A1-207ENST00000612273 C18orf15Q96N68 181 aa11.08□□□□□ -0.64
COL6A1-207ENST00000612273 MRPS16Q9Y3D3 137 aaKnown RBP11.08□□□□□ -0.64
COL6A1-207ENST00000612273 LYZL1Q6UWQ5 148 aa11.08□□□□□ -0.64
COL6A1-207ENST00000612273 ZNF491Q8N8L2 437 aa11.08□□□□□ -0.64
COL6A1-207ENST00000612273 LIPFP07098 398 aa11.08□□□□□ -0.64
COL6A1-207ENST00000612273 ZNF672Q499Z4 452 aaPredicted RBP11.08□□□□□ -0.64
COL6A1-207ENST00000612273 TM4SF20Q53R12 229 aa11.07□□□□□ -0.64
COL6A1-207ENST00000612273 NEU4Q8WWR8 484 aaPredicted RBP11.07□□□□□ -0.64
COL6A1-207ENST00000612273 CRYGBP07316 175 aa11.07□□□□□ -0.64
COL6A1-207ENST00000612273 NHLH1Q02575 133 aa11.07□□□□□ -0.64
COL6A1-207ENST00000612273 SIGLEC15Q6ZMC9 328 aa11.07□□□□□ -0.64
COL6A1-207ENST00000612273 MRPL52Q86TS9 123 aaKnown RBP11.07□□□□□ -0.64
COL6A1-207ENST00000612273 K7EQM0 130 aa11.06□□□□□ -0.64
COL6A1-207ENST00000612273 UBE2V1Q13404 147 aa11.06□□□□□ -0.64
COL6A1-207ENST00000612273 RIGQ13278 110 aa11.06□□□□□ -0.64
COL6A1-207ENST00000612273 CDSNQ15517 529 aa11.06□□□□□ -0.64
COL6A1-207ENST00000612273 AMMECR1LQ6DCA0 310 aa11.06□□□□□ -0.64
COL6A1-207ENST00000612273 KAAG1Q9UBP8 84 aa11.06□□□□□ -0.64
COL6A1-207ENST00000612273 SHANK2-AS3Q9BTD1 123 aa11.06□□□□□ -0.64
COL6A1-207ENST00000612273 AAMDCQ9H7C9 122 aa11.06□□□□□ -0.64
COL6A1-207ENST00000612273 MSRB1Q9NZV6 116 aa11.06□□□□□ -0.64
COL6A1-207ENST00000612273 CBY1Q9Y3M2 126 aa11.06□□□□□ -0.64
COL6A1-207ENST00000612273 ZNF207O43670 478 aaKnown RBP11.05□□□□□ -0.64
COL6A1-207ENST00000612273 NDPQ00604 133 aa11.05□□□□□ -0.64
COL6A1-207ENST00000612273 PRSS57Q6UWY2 283 aa11.05□□□□□ -0.64
COL6A1-207ENST00000612273 CHCHD1Q96BP2 118 aaKnown RBP11.05□□□□□ -0.64
COL6A1-207ENST00000612273 ZNF492Q9P255 531 aa11.05□□□□□ -0.64
COL6A1-207ENST00000612273 CSPG4Q6UVK1 2322 aa11.05□□□□□ -0.64
COL6A1-207ENST00000612273 TMEM189A5PLL7 270 aa11.05□□□□□ -0.64
COL6A1-207ENST00000612273 ORM1P02763 201 aa11.05□□□□□ -0.64
COL6A1-207ENST00000612273 RELQ04864 619 aaPredicted RBP11.05□□□□□ -0.64
COL6A1-207ENST00000612273 RBPJQ06330 500 aa11.05□□□□□ -0.64
COL6A1-207ENST00000612273 TWIST1Q15672 202 aa11.05□□□□□ -0.64
COL6A1-207ENST00000612273 PSG3Q16557 428 aa11.05□□□□□ -0.64
COL6A1-207ENST00000612273 FAM71F2Q6NXP2 309 aa11.05□□□□□ -0.64
COL6A1-207ENST00000612273 ORAOV1Q8WV07 137 aa11.05□□□□□ -0.64
COL6A1-207ENST00000612273 HIVEP3Q5T1R4 2406 aa11.05□□□□□ -0.64
COL6A1-207ENST00000612273 B9A039 149 aa11.04□□□□□ -0.64
COL6A1-207ENST00000612273 J3KRW8 73 aa11.04□□□□□ -0.64
COL6A1-207ENST00000612273 NBR2O15453 112 aa11.04□□□□□ -0.64
COL6A1-207ENST00000612273 SFTPCP11686 197 aa11.04□□□□□ -0.64
COL6A1-207ENST00000612273 CCL21O00585 134 aa11.04□□□□□ -0.64
COL6A1-207ENST00000612273 NDUFS7O75251 213 aa11.04□□□□□ -0.64
COL6A1-207ENST00000612273 ZNF414Q96IQ9 312 aa11.04□□□□□ -0.64
COL6A1-207ENST00000612273 NDFIP1Q9BT67 221 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms