RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 PDE6HQ13956 83 aa12.03□□□□□ -0.48
CLTCL1-207ENST00000611723 PRR31Q5SQ13 230 aa12.03□□□□□ -0.48
CLTCL1-207ENST00000611723 C9orf66Q5T8R8 295 aa12.03□□□□□ -0.48
CLTCL1-207ENST00000611723 TMPRSS5Q9H3S3 457 aa12.03□□□□□ -0.48
CLTCL1-207ENST00000611723 TRBV19A0A075B6N1 114 aa12.02□□□□□ -0.49
CLTCL1-207ENST00000611723 TSPAN4O14817 238 aa12.02□□□□□ -0.49
CLTCL1-207ENST00000611723 ZNF253O75346 499 aa12.02□□□□□ -0.49
CLTCL1-207ENST00000611723 OR10J4P0C629 311 aa12.02□□□□□ -0.49
CLTCL1-207ENST00000611723 ATF4P18848 351 aaPredicted RBP12.02□□□□□ -0.49
CLTCL1-207ENST00000611723 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.02□□□□□ -0.49
CLTCL1-207ENST00000611723 PCNPQ8WW12 178 aaKnown RBP12.02□□□□□ -0.49
CLTCL1-207ENST00000611723 TRAV2A0A0B4J234 112 aa12.01□□□□□ -0.49
CLTCL1-207ENST00000611723 CD300EQ496F6 205 aaPredicted RBP12.01□□□□□ -0.49
CLTCL1-207ENST00000611723 SAMD13Q5VXD3 122 aa12.01□□□□□ -0.49
CLTCL1-207ENST00000611723 NRN1Q9NPD7 142 aa12.01□□□□□ -0.49
CLTCL1-207ENST00000611723 ARL2-SNX15V9GYD0 113 aa12.01□□□□□ -0.49
CLTCL1-207ENST00000611723 VWFP04275 2813 aa12□□□□□ -0.49
CLTCL1-207ENST00000611723 A0A1B0GV50 99 aa12□□□□□ -0.49
CLTCL1-207ENST00000611723 SOCS3O14543 225 aa12□□□□□ -0.49
CLTCL1-207ENST00000611723 NDUFB4O95168 129 aa12□□□□□ -0.49
CLTCL1-207ENST00000611723 RPL11P62913 178 aaKnown RBP12□□□□□ -0.49
CLTCL1-207ENST00000611723 PAFAH1B2P68402 229 aa12□□□□□ -0.49
CLTCL1-207ENST00000611723 RBPMS2Q6ZRY4 209 aaKnown RBP12□□□□□ -0.49
CLTCL1-207ENST00000611723 TMEM61Q8N0U2 210 aa12□□□□□ -0.49
CLTCL1-207ENST00000611723 LYPD1Q8N2G4 141 aa12□□□□□ -0.49
CLTCL1-207ENST00000611723 MS4A6AQ9H2W1 248 aa12□□□□□ -0.49
CLTCL1-207ENST00000611723 A0A1W2PRE2 83 aa11.99□□□□□ -0.49
CLTCL1-207ENST00000611723 IQCF2Q8IXL9 164 aa11.99□□□□□ -0.49
CLTCL1-207ENST00000611723 DCANP1Q8TF63 244 aa11.99□□□□□ -0.49
CLTCL1-207ENST00000611723 BLNKQ8WV28 456 aa11.99□□□□□ -0.49
CLTCL1-207ENST00000611723 SLC50A1Q9BRV3 221 aa11.99□□□□□ -0.49
CLTCL1-207ENST00000611723 GPR61Q9BZJ8 451 aa11.99□□□□□ -0.49
CLTCL1-207ENST00000611723 MANBALQ9NQG1 85 aa11.99□□□□□ -0.49
CLTCL1-207ENST00000611723 ZNF331Q9NQX6 463 aaPredicted RBP11.99□□□□□ -0.49
CLTCL1-207ENST00000611723 CLEC5AQ9NY25 188 aa11.99□□□□□ -0.49
CLTCL1-207ENST00000611723 SORL1Q92673 2214 aa11.98□□□□□ -0.49
CLTCL1-207ENST00000611723 K7EQG2 157 aa11.98□□□□□ -0.49
CLTCL1-207ENST00000611723 SNRPCP09234 159 aaKnown RBP11.98□□□□□ -0.49
CLTCL1-207ENST00000611723 TAGLN2P37802 199 aaKnown RBP11.98□□□□□ -0.49
CLTCL1-207ENST00000611723 PSG9Q00887 426 aa11.98□□□□□ -0.49
CLTCL1-207ENST00000611723 SPAG8Q99932 426 aaPredicted RBP11.98□□□□□ -0.49
CLTCL1-207ENST00000611723 NKX6-2Q9C056 277 aaPredicted RBP11.98□□□□□ -0.49
CLTCL1-207ENST00000611723 MED9Q9NWA0 146 aa11.98□□□□□ -0.49
CLTCL1-207ENST00000611723 SELENOKQ9Y6D0 94 aa11.98□□□□□ -0.49
CLTCL1-207ENST00000611723 TRAV8-2A0A0B4J237 113 aa11.97□□□□□ -0.49
CLTCL1-207ENST00000611723 IZUMO1RA6ND01 250 aa11.97□□□□□ -0.49
CLTCL1-207ENST00000611723 FAM74A7A6NL05 159 aa11.97□□□□□ -0.49
CLTCL1-207ENST00000611723 H3BTX0 84 aa11.97□□□□□ -0.49
CLTCL1-207ENST00000611723 DNASE2O00115 360 aaPredicted RBP11.97□□□□□ -0.49
CLTCL1-207ENST00000611723 SLC17A3O00476 420 aa11.97□□□□□ -0.49
CLTCL1-207ENST00000611723 ISLRO14498 428 aa11.97□□□□□ -0.49
CLTCL1-207ENST00000611723 IFNA1P01562 189 aa11.97□□□□□ -0.49
CLTCL1-207ENST00000611723 IGLL1P15814 213 aa11.97□□□□□ -0.49
CLTCL1-207ENST00000611723 LCN12Q6JVE5 192 aa11.97□□□□□ -0.49
CLTCL1-207ENST00000611723 GBGT1Q8N5D6 347 aa11.97□□□□□ -0.49
CLTCL1-207ENST00000611723 TXNDC17Q9BRA2 123 aa11.97□□□□□ -0.49
CLTCL1-207ENST00000611723 OTORQ9NRC9 128 aa11.97□□□□□ -0.49
CLTCL1-207ENST00000611723 GNG13Q9P2W3 67 aa11.97□□□□□ -0.49
CLTCL1-207ENST00000611723 ZNF256Q9Y2P7 627 aaPredicted RBP11.97□□□□□ -0.49
CLTCL1-207ENST00000611723 PKD1L1Q8TDX9 2849 aa11.96□□□□□ -0.49
CLTCL1-207ENST00000611723 IGKV3-7A0A075B6H7 116 aa11.96□□□□□ -0.49
CLTCL1-207ENST00000611723 PAGE4O60829 102 aa11.96□□□□□ -0.49
CLTCL1-207ENST00000611723 RANP62826 216 aaKnown RBP11.96□□□□□ -0.49
CLTCL1-207ENST00000611723 ARL6IP6Q8N6S5 226 aa11.96□□□□□ -0.49
CLTCL1-207ENST00000611723 C16orf92Q96LL3 132 aa11.96□□□□□ -0.49
CLTCL1-207ENST00000611723 FAM210AQ96ND0 272 aa11.96□□□□□ -0.49
CLTCL1-207ENST00000611723 Q9H3A6 140 aa11.96□□□□□ -0.49
CLTCL1-207ENST00000611723 PRELID1Q9Y255 219 aa11.96□□□□□ -0.49
CLTCL1-207ENST00000611723 YTHDF2Q9Y5A9 579 aaKnown RBP11.96□□□□□ -0.49
CLTCL1-207ENST00000611723 LINC00862A6NCI5 91 aa11.95□□□□□ -0.5
CLTCL1-207ENST00000611723 PGPA6NDG6 321 aa11.95□□□□□ -0.5
CLTCL1-207ENST00000611723 OR4C46A6NHA9 309 aa11.95□□□□□ -0.5
CLTCL1-207ENST00000611723 NDUFS6O75380 124 aaKnown RBP11.95□□□□□ -0.5
CLTCL1-207ENST00000611723 BCL2P10415 239 aa11.95□□□□□ -0.5
CLTCL1-207ENST00000611723 ID1P41134 155 aa11.95□□□□□ -0.5
CLTCL1-207ENST00000611723 UBE2G2P60604 165 aa11.95□□□□□ -0.5
CLTCL1-207ENST00000611723 WFDC3Q8IUB2 231 aa11.95□□□□□ -0.5
CLTCL1-207ENST00000611723 CCDC28AQ8IWP9 274 aa11.95□□□□□ -0.5
CLTCL1-207ENST00000611723 MRPL53Q96EL3 112 aaKnown RBP11.95□□□□□ -0.5
CLTCL1-207ENST00000611723 LOC102723971A0A1B0GUV8 181 aa11.94□□□□□ -0.5
CLTCL1-207ENST00000611723 RBFOX3A6NFN3 312 aa11.94□□□□□ -0.5
CLTCL1-207ENST00000611723 SUMO1P63165 101 aaKnown RBP11.94□□□□□ -0.5
CLTCL1-207ENST00000611723 PSG3Q16557 428 aa11.94□□□□□ -0.5
CLTCL1-207ENST00000611723 BEAN1Q3B7T3 259 aa11.94□□□□□ -0.5
CLTCL1-207ENST00000611723 ZNF506Q5JVG8 444 aa11.94□□□□□ -0.5
CLTCL1-207ENST00000611723 EXOC3-AS1Q8N2X6 119 aa11.94□□□□□ -0.5
CLTCL1-207ENST00000611723 AAMDCQ9H7C9 122 aa11.94□□□□□ -0.5
CLTCL1-207ENST00000611723 VAX2Q9UIW0 290 aa11.94□□□□□ -0.5
CLTCL1-207ENST00000611723 RAB19A4D1S5 217 aa11.93□□□□□ -0.5
CLTCL1-207ENST00000611723 GGTLC3B5MD39 225 aa11.93□□□□□ -0.5
CLTCL1-207ENST00000611723 TFPI2P48307 235 aa11.93□□□□□ -0.5
CLTCL1-207ENST00000611723 CMC4P56277 68 aaPredicted RBP11.93□□□□□ -0.5
CLTCL1-207ENST00000611723 ICAM4Q14773 271 aa11.93□□□□□ -0.5
CLTCL1-207ENST00000611723 HAGHQ16775 308 aa11.93□□□□□ -0.5
CLTCL1-207ENST00000611723 CST9LP1Q5W188 147 aa11.93□□□□□ -0.5
CLTCL1-207ENST00000611723 RARRES2Q99969 163 aa11.93□□□□□ -0.5
CLTCL1-207ENST00000611723 TCEAL7Q9BRU2 100 aa11.93□□□□□ -0.5
CLTCL1-207ENST00000611723 C11orf94C9JXX5 98 aa11.92□□□□□ -0.5
CLTCL1-207ENST00000611723 SNRPD3P62318 126 aaKnown RBP11.92□□□□□ -0.5
CLTCL1-207ENST00000611723 GUCA2BQ16661 112 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms