RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 K7EMI3 77 aa16.18■□□□□ 0.18
SSBP3-216ENST00000610401 IGKV2D-40P01614 121 aaPredicted RBP16.18■□□□□ 0.18
SSBP3-216ENST00000610401 RNASE6Q93091 150 aaKnown RBP16.18■□□□□ 0.18
SSBP3-216ENST00000610401 CRYABP02511 175 aaKnown RBP16.17■□□□□ 0.18
SSBP3-216ENST00000610401 LIPFP07098 398 aa16.17■□□□□ 0.18
SSBP3-216ENST00000610401 IGLC1P0CG04 106 aa16.17■□□□□ 0.18
SSBP3-216ENST00000610401 IGHV1-3A0A0C4DH29 117 aa16.17■□□□□ 0.18
SSBP3-216ENST00000610401 KLRD1Q13241 179 aa16.17■□□□□ 0.18
SSBP3-216ENST00000610401 LINC00574Q9H8X3 128 aa16.17■□□□□ 0.18
SSBP3-216ENST00000610401 PPP1R14DQ9NXH3 145 aa16.17■□□□□ 0.18
SSBP3-216ENST00000610401 KLF12Q9Y4X4 402 aa16.17■□□□□ 0.18
SSBP3-216ENST00000610401 NMUP48645 174 aa16.16■□□□□ 0.18
SSBP3-216ENST00000610401 ATP5IP56385 69 aaPredicted RBP16.16■□□□□ 0.18
SSBP3-216ENST00000610401 PSG9Q00887 426 aa16.16■□□□□ 0.18
SSBP3-216ENST00000610401 LINC01560Q8TB33 94 aa16.16■□□□□ 0.18
SSBP3-216ENST00000610401 IGHV3-66A0A0C4DH42 116 aa16.16■□□□□ 0.18
SSBP3-216ENST00000610401 IGHV2-70DA0A0C4DH43 119 aa16.16■□□□□ 0.18
SSBP3-216ENST00000610401 ZNF785A8K8V0 405 aa16.16■□□□□ 0.18
SSBP3-216ENST00000610401 PRRG2O14669 202 aa16.16■□□□□ 0.18
SSBP3-216ENST00000610401 HLA-DRB1P01911 266 aa16.16■□□□□ 0.18
SSBP3-216ENST00000610401 HLA-DMBP28068 263 aa16.16■□□□□ 0.18
SSBP3-216ENST00000610401 NEU4Q8WWR8 484 aaPredicted RBP16.16■□□□□ 0.18
SSBP3-216ENST00000610401 TRGV9Q99603 122 aa16.16■□□□□ 0.18
SSBP3-216ENST00000610401 IGKV1-17P01599 117 aa16.16■□□□□ 0.18
SSBP3-216ENST00000610401 IGLV2-11P01706 119 aa16.16■□□□□ 0.18
SSBP3-216ENST00000610401 MC5RP33032 325 aa16.16■□□□□ 0.18
SSBP3-216ENST00000610401 CRIP1P50238 77 aa16.16■□□□□ 0.18
SSBP3-216ENST00000610401 TTTY13Q9BZ97 58 aa16.16■□□□□ 0.18
SSBP3-216ENST00000610401 PSG8Q9UQ74 426 aa16.16■□□□□ 0.18
SSBP3-216ENST00000610401 VPS13CQ709C8 3753 aa16.15■□□□□ 0.18
SSBP3-216ENST00000610401 PTPRQQ9UMZ3 2332 aa16.15■□□□□ 0.18
SSBP3-216ENST00000610401 LYZL1Q6UWQ5 148 aa16.15■□□□□ 0.18
SSBP3-216ENST00000610401 ST20Q9HBF5 79 aa16.15■□□□□ 0.18
SSBP3-216ENST00000610401 TIMM23O14925 209 aa16.14■□□□□ 0.17
SSBP3-216ENST00000610401 CACNG7P62955 275 aa16.14■□□□□ 0.17
SSBP3-216ENST00000610401 ANKRD39Q53RE8 183 aa16.14■□□□□ 0.17
SSBP3-216ENST00000610401 GFRALQ6UXV0 394 aa16.14■□□□□ 0.17
SSBP3-216ENST00000610401 NCOR1P1Q9H4R4 102 aa16.14■□□□□ 0.17
SSBP3-216ENST00000610401 NGBQ9NPG2 151 aa16.14■□□□□ 0.17
SSBP3-216ENST00000610401 NPIPB5A8MRT5 1133 aa16.14■□□□□ 0.17
SSBP3-216ENST00000610401 E7EQL1 145 aa16.14■□□□□ 0.17
SSBP3-216ENST00000610401 LGALS7P47929 136 aa16.14■□□□□ 0.17
SSBP3-216ENST00000610401 TMEM155Q4W5P6 130 aa16.14■□□□□ 0.17
SSBP3-216ENST00000610401 NCOR2Q9Y618 2525 aa16.14■□□□□ 0.17
SSBP3-216ENST00000610401 NCBP2LA6PVI3 153 aaKnown RBP16.14■□□□□ 0.17
SSBP3-216ENST00000610401 GPR183P32249 361 aa16.14■□□□□ 0.17
SSBP3-216ENST00000610401 ABHD17AQ96GS6 310 aa16.14■□□□□ 0.17
SSBP3-216ENST00000610401 THYN1Q9P016 225 aa16.14■□□□□ 0.17
SSBP3-216ENST00000610401 IGHV3-49A0A0A0MS15 119 aa16.13■□□□□ 0.17
SSBP3-216ENST00000610401 TEX22C9J3V5 150 aa16.13■□□□□ 0.17
SSBP3-216ENST00000610401 CHCHD1Q96BP2 118 aaKnown RBP16.13■□□□□ 0.17
SSBP3-216ENST00000610401 BPIFA4PQ86YQ2 179 aa16.13■□□□□ 0.17
SSBP3-216ENST00000610401 SCRT2Q9NQ03 307 aa16.13■□□□□ 0.17
SSBP3-216ENST00000610401 HSPB8Q9UJY1 196 aa16.13■□□□□ 0.17
SSBP3-216ENST00000610401 CHD8Q9HCK8 2581 aa16.12■□□□□ 0.17
SSBP3-216ENST00000610401 CT45A10P0DMU9 189 aa16.12■□□□□ 0.17
SSBP3-216ENST00000610401 OTORQ9NRC9 128 aa16.12■□□□□ 0.17
SSBP3-216ENST00000610401 PPIAL4CA0A0B4J2A2 164 aa16.12■□□□□ 0.17
SSBP3-216ENST00000610401 C7orf71A4D174 169 aa16.12■□□□□ 0.17
SSBP3-216ENST00000610401 K7EP13 123 aa16.12■□□□□ 0.17
SSBP3-216ENST00000610401 PPIAL4GP0DN37 164 aa16.12■□□□□ 0.17
SSBP3-216ENST00000610401 FAM57AQ8TBR7 257 aa16.12■□□□□ 0.17
SSBP3-216ENST00000610401 MSRB1Q9NZV6 116 aa16.12■□□□□ 0.17
SSBP3-216ENST00000610401 SAP30O75446 220 aa16.12■□□□□ 0.17
SSBP3-216ENST00000610401 GAS8-AS1O95177 125 aa16.12■□□□□ 0.17
SSBP3-216ENST00000610401 RIPPLY3P57055 190 aa16.12■□□□□ 0.17
SSBP3-216ENST00000610401 CST9LQ9H4G1 147 aa16.12■□□□□ 0.17
SSBP3-216ENST00000610401 GNG7O60262 68 aa16.11■□□□□ 0.17
SSBP3-216ENST00000610401 EVI2AP22794 236 aa16.11■□□□□ 0.17
SSBP3-216ENST00000610401 GRNP28799 593 aaKnown RBP16.11■□□□□ 0.17
SSBP3-216ENST00000610401 TWIST1Q15672 202 aa16.11■□□□□ 0.17
SSBP3-216ENST00000610401 Q6ZS92 163 aa16.11■□□□□ 0.17
SSBP3-216ENST00000610401 OR4A5Q8NH83 315 aa16.11■□□□□ 0.17
SSBP3-216ENST00000610401 BUB1B-PAK6H3BSN5 160 aa16.11■□□□□ 0.17
SSBP3-216ENST00000610401 CRYGCP07315 174 aa16.11■□□□□ 0.17
SSBP3-216ENST00000610401 FBLL1A6NHQ2 334 aaKnown RBP16.1■□□□□ 0.17
SSBP3-216ENST00000610401 RIGQ13278 110 aa16.1■□□□□ 0.17
SSBP3-216ENST00000610401 HRNRQ86YZ3 2850 aaPredicted RBP16.1■□□□□ 0.17
SSBP3-216ENST00000610401 ZNF747Q9BV97 191 aa16.1■□□□□ 0.17
SSBP3-216ENST00000610401 TRBV19A0A075B6N1 114 aa16.1■□□□□ 0.17
SSBP3-216ENST00000610401 H3BUT2 72 aa16.1■□□□□ 0.17
SSBP3-216ENST00000610401 RHOGP84095 191 aa16.1■□□□□ 0.17
SSBP3-216ENST00000610401 RNF125Q96EQ8 232 aa16.1■□□□□ 0.17
SSBP3-216ENST00000610401 NDFIP1Q9BT67 221 aa16.1■□□□□ 0.17
SSBP3-216ENST00000610401 FAM90A27PA6NNH2 459 aa16.09■□□□□ 0.17
SSBP3-216ENST00000610401 GAGE12BA1L429 117 aa16.09■□□□□ 0.17
SSBP3-216ENST00000610401 CSN1S1P47710 185 aa16.09■□□□□ 0.17
SSBP3-216ENST00000610401 DLX6P56179 175 aa16.09■□□□□ 0.17
SSBP3-216ENST00000610401 C12orf54Q6X4T0 127 aa16.09■□□□□ 0.17
SSBP3-216ENST00000610401 PCP2Q8IVA1 136 aa16.09■□□□□ 0.17
SSBP3-216ENST00000610401 OR10AG1Q8NH19 301 aa16.09■□□□□ 0.17
SSBP3-216ENST00000610401 PRELID3AQ96N28 172 aa16.09■□□□□ 0.17
SSBP3-216ENST00000610401 AP1S3Q96PC3 154 aa16.09■□□□□ 0.17
SSBP3-216ENST00000610401 SIGLEC8Q9NYZ4 499 aa16.09■□□□□ 0.17
SSBP3-216ENST00000610401 FAM231BA6NCW3 169 aa16.08■□□□□ 0.17
SSBP3-216ENST00000610401 J3KRW8 73 aa16.08■□□□□ 0.17
SSBP3-216ENST00000610401 NUP37Q8NFH4 326 aa16.08■□□□□ 0.17
SSBP3-216ENST00000610401 SCNM1Q9BWG6 230 aa16.08■□□□□ 0.17
SSBP3-216ENST00000610401 I3L2K1 104 aa16.08■□□□□ 0.16
SSBP3-216ENST00000610401 ORM1P02763 201 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms