RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 TMEM128Q5BJH2 165 aa11.6□□□□□ -0.55
CCDC12-210ENST00000604181 PATE2Q6UY27 113 aa11.6□□□□□ -0.55
CCDC12-210ENST00000604181 Q6ZRN7 208 aaPredicted RBP11.6□□□□□ -0.55
CCDC12-210ENST00000604181 DYNC2LI1Q8TCX1 351 aa11.6□□□□□ -0.55
CCDC12-210ENST00000604181 RPUSD4Q96CM3 377 aaKnown RBP11.6□□□□□ -0.55
CCDC12-210ENST00000604181 CIB3Q96Q77 187 aaPredicted RBP11.6□□□□□ -0.55
CCDC12-210ENST00000604181 RABL2BQ9UNT1 228 aa11.6□□□□□ -0.55
CCDC12-210ENST00000604181 GAGE12BA1L429 117 aa11.59□□□□□ -0.55
CCDC12-210ENST00000604181 SMCO3A2RU48 225 aa11.59□□□□□ -0.55
CCDC12-210ENST00000604181 PMS2P5A8MQ11 134 aa11.59□□□□□ -0.55
CCDC12-210ENST00000604181 PRAC2D3DTV9 90 aa11.59□□□□□ -0.55
CCDC12-210ENST00000604181 GAGE7O76087 117 aa11.59□□□□□ -0.55
CCDC12-210ENST00000604181 IL5P05113 134 aa11.59□□□□□ -0.55
CCDC12-210ENST00000604181 HOXB5P09067 269 aa11.59□□□□□ -0.55
CCDC12-210ENST00000604181 LINC00869P0C866 280 aa11.59□□□□□ -0.55
CCDC12-210ENST00000604181 GAGE12FP0CL80 117 aa11.59□□□□□ -0.55
CCDC12-210ENST00000604181 GAGE12GP0CL81 117 aa11.59□□□□□ -0.55
CCDC12-210ENST00000604181 GAGE12IP0CL82 117 aa11.59□□□□□ -0.55
CCDC12-210ENST00000604181 VAMP1P23763 118 aa11.59□□□□□ -0.55
CCDC12-210ENST00000604181 PLP1P60201 277 aa11.59□□□□□ -0.55
CCDC12-210ENST00000604181 RAP2BP61225 183 aa11.59□□□□□ -0.55
CCDC12-210ENST00000604181 PPP1R1AQ13522 171 aa11.59□□□□□ -0.55
CCDC12-210ENST00000604181 ZNF493Q6ZR52 646 aa11.59□□□□□ -0.55
CCDC12-210ENST00000604181 ZNF503Q96F45 646 aa11.59□□□□□ -0.55
CCDC12-210ENST00000604181 PPP1R14DQ9NXH3 145 aa11.59□□□□□ -0.55
CCDC12-210ENST00000604181 MRPS16Q9Y3D3 137 aaKnown RBP11.59□□□□□ -0.55
CCDC12-210ENST00000604181 HYPMO75409 117 aa11.58□□□□□ -0.56
CCDC12-210ENST00000604181 OR5G3P0C626 314 aa11.58□□□□□ -0.56
CCDC12-210ENST00000604181 LINC00315P59091 139 aa11.58□□□□□ -0.56
CCDC12-210ENST00000604181 RPP30P78346 268 aaKnown RBP11.58□□□□□ -0.56
CCDC12-210ENST00000604181 GFI1BQ5VTD9 330 aa11.58□□□□□ -0.56
CCDC12-210ENST00000604181 ZBTB8BQ8NAP8 495 aaPredicted RBP11.58□□□□□ -0.56
CCDC12-210ENST00000604181 OR10J6PQ8NGY7 276 aa11.58□□□□□ -0.56
CCDC12-210ENST00000604181 TRIM63Q969Q1 353 aa11.58□□□□□ -0.56
CCDC12-210ENST00000604181 STRAPQ9Y3F4 350 aaKnown RBP11.58□□□□□ -0.56
CCDC12-210ENST00000604181 EPM2AB3EWF7 344 aa11.57□□□□□ -0.56
CCDC12-210ENST00000604181 H7BYZ3 331 aa11.57□□□□□ -0.56
CCDC12-210ENST00000604181 SFT2D2O95562 160 aa11.57□□□□□ -0.56
CCDC12-210ENST00000604181 TNFSF8P32971 234 aa11.57□□□□□ -0.56
CCDC12-210ENST00000604181 XGP55808 180 aa11.57□□□□□ -0.56
CCDC12-210ENST00000604181 POLR2GP62487 172 aaKnown RBP eCLIP11.57□□□□□ -0.56
CCDC12-210ENST00000604181 TMPRSS5Q9H3S3 457 aa11.57□□□□□ -0.56
CCDC12-210ENST00000604181 CCDC59Q9P031 241 aaKnown RBP11.57□□□□□ -0.56
CCDC12-210ENST00000604181 RABL2AQ9UBK7 228 aaPredicted RBP11.57□□□□□ -0.56
CCDC12-210ENST00000604181 RSL24D1Q9UHA3 163 aaKnown RBP11.57□□□□□ -0.56
CCDC12-210ENST00000604181 LINC00854A0A1B0GVQ3 168 aa11.56□□□□□ -0.56
CCDC12-210ENST00000604181 A0A1W2PPQ1 181 aa11.56□□□□□ -0.56
CCDC12-210ENST00000604181 H3BTX0 84 aa11.56□□□□□ -0.56
CCDC12-210ENST00000604181 SLC17A3O00476 420 aa11.56□□□□□ -0.56
CCDC12-210ENST00000604181 RRAS2P62070 204 aaPredicted RBP11.56□□□□□ -0.56
CCDC12-210ENST00000604181 LRRC20Q8TCA0 184 aa11.56□□□□□ -0.56
CCDC12-210ENST00000604181 VSIG2Q96IQ7 327 aa11.56□□□□□ -0.56
CCDC12-210ENST00000604181 SLIRPQ9GZT3 109 aaKnown RBP11.56□□□□□ -0.56
CCDC12-210ENST00000604181 ARL6Q9H0F7 186 aa11.56□□□□□ -0.56
CCDC12-210ENST00000604181 ZNF331Q9NQX6 463 aaPredicted RBP11.56□□□□□ -0.56
CCDC12-210ENST00000604181 A0A096LPF7 62 aa11.55□□□□□ -0.56
CCDC12-210ENST00000604181 J3KRW8 73 aa11.55□□□□□ -0.56
CCDC12-210ENST00000604181 ADAP1O75689 374 aa11.55□□□□□ -0.56
CCDC12-210ENST00000604181 S100A7P31151 101 aa11.55□□□□□ -0.56
CCDC12-210ENST00000604181 ID3Q02535 119 aa11.55□□□□□ -0.56
CCDC12-210ENST00000604181 MORN5Q5VZ52 161 aa11.55□□□□□ -0.56
CCDC12-210ENST00000604181 Q6ZTI0 123 aa11.55□□□□□ -0.56
CCDC12-210ENST00000604181 ARV1Q9H2C2 271 aa11.55□□□□□ -0.56
CCDC12-210ENST00000604181 TNFRSF18Q9Y5U5 241 aa11.55□□□□□ -0.56
CCDC12-210ENST00000604181 SRRM2Q9UQ35 2752 aaKnown RBP11.54□□□□□ -0.56
CCDC12-210ENST00000604181 FABP12A6NFH5 140 aa11.54□□□□□ -0.56
CCDC12-210ENST00000604181 SLC38A11Q08AI6 406 aa11.54□□□□□ -0.56
CCDC12-210ENST00000604181 PSENENQ9NZ42 101 aa11.54□□□□□ -0.56
CCDC12-210ENST00000604181 PIGBOS1A0A0B4J2F0 54 aa11.53□□□□□ -0.56
CCDC12-210ENST00000604181 H3BNG1 76 aa11.53□□□□□ -0.56
CCDC12-210ENST00000604181 RLN2P04090 185 aa11.53□□□□□ -0.56
CCDC12-210ENST00000604181 INAFM2P0DMQ5 153 aa11.53□□□□□ -0.56
CCDC12-210ENST00000604181 ANXA7P20073 488 aaKnown RBP11.53□□□□□ -0.56
CCDC12-210ENST00000604181 SELENOTP62341 195 aa11.53□□□□□ -0.56
CCDC12-210ENST00000604181 CCDC190Q86UF4 302 aa11.53□□□□□ -0.56
CCDC12-210ENST00000604181 LYPD1Q8N2G4 141 aa11.53□□□□□ -0.56
CCDC12-210ENST00000604181 C20orf144Q9BQM9 153 aa11.53□□□□□ -0.56
CCDC12-210ENST00000604181 TRAV12-3A0A0B4J271 114 aa11.52□□□□□ -0.57
CCDC12-210ENST00000604181 K7EPK0 472 aa11.52□□□□□ -0.57
CCDC12-210ENST00000604181 SSSCA1O60232 199 aa11.52□□□□□ -0.57
CCDC12-210ENST00000604181 METTL15P1P0C7V9 234 aa11.52□□□□□ -0.57
CCDC12-210ENST00000604181 CT45A10P0DMU9 189 aa11.52□□□□□ -0.57
CCDC12-210ENST00000604181 ARL16Q0P5N6 197 aa11.52□□□□□ -0.57
CCDC12-210ENST00000604181 LCN15Q6UWW0 184 aa11.52□□□□□ -0.57
CCDC12-210ENST00000604181 CCDC28AQ8IWP9 274 aa11.52□□□□□ -0.57
CCDC12-210ENST00000604181 MRPS26Q9BYN8 205 aaKnown RBP11.52□□□□□ -0.57
CCDC12-210ENST00000604181 SNURFLB1AK76 121 aa11.51□□□□□ -0.57
CCDC12-210ENST00000604181 H3BQ15 152 aa11.51□□□□□ -0.57
CCDC12-210ENST00000604181 CXCL2P19875 107 aa11.51□□□□□ -0.57
CCDC12-210ENST00000604181 FAUP35544 74 aaKnown RBP11.51□□□□□ -0.57
CCDC12-210ENST00000604181 TMEM14EPQ6UXP3 125 aa11.51□□□□□ -0.57
CCDC12-210ENST00000604181 LINC00305Q7Z4B0 112 aa11.51□□□□□ -0.57
CCDC12-210ENST00000604181 V9GYH0 126 aa11.51□□□□□ -0.57
CCDC12-210ENST00000604181 DNAH8Q96JB1 4490 aa11.5□□□□□ -0.57
CCDC12-210ENST00000604181 DNAH10OSP0CZ25 163 aa11.5□□□□□ -0.57
CCDC12-210ENST00000604181 KRTAP10-1P60331 282 aa11.5□□□□□ -0.57
CCDC12-210ENST00000604181 DAZ2Q13117 558 aaKnown RBP11.5□□□□□ -0.57
CCDC12-210ENST00000604181 Q5VSD8 79 aa11.5□□□□□ -0.57
CCDC12-210ENST00000604181 TOMM5Q8N4H5 51 aa11.5□□□□□ -0.57
CCDC12-210ENST00000604181 MCFD2Q8NI22 146 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms