RNA–Protein interactions for RNA: ENST00000601689.1

UPF1-212, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-212ENST00000601689 C4BPBP20851 252 aa14.13□□□□□ -0.15
UPF1-212ENST00000601689 ZNF266Q14584 549 aa14.13□□□□□ -0.15
UPF1-212ENST00000601689 PSG3Q16557 428 aa14.13□□□□□ -0.15
UPF1-212ENST00000601689 GDF5OSQ5U4N7 250 aa14.13□□□□□ -0.15
UPF1-212ENST00000601689 INO80EQ8NBZ0 244 aaPredicted RBP14.13□□□□□ -0.15
UPF1-212ENST00000601689 MFFQ9GZY8 342 aa14.13□□□□□ -0.15
UPF1-212ENST00000601689 CXorf65A6NEN9 183 aa14.12□□□□□ -0.15
UPF1-212ENST00000601689 OXA1LQ15070 435 aa14.12□□□□□ -0.15
UPF1-212ENST00000601689 C20orf173Q96LM9 149 aa14.12□□□□□ -0.15
UPF1-212ENST00000601689 MRPL32Q9BYC8 188 aaKnown RBP14.12□□□□□ -0.15
UPF1-212ENST00000601689 C11orf68Q9H3H3 251 aaKnown RBP14.12□□□□□ -0.15
UPF1-212ENST00000601689 F6UB75 175 aa14.11□□□□□ -0.15
UPF1-212ENST00000601689 RHOBP62745 196 aa14.11□□□□□ -0.15
UPF1-212ENST00000601689 IGFL4Q6B9Z1 124 aa14.11□□□□□ -0.15
UPF1-212ENST00000601689 RNF182Q8N6D2 247 aa14.11□□□□□ -0.15
UPF1-212ENST00000601689 PARD6GQ9BYG4 376 aaPredicted RBP14.11□□□□□ -0.15
UPF1-212ENST00000601689 ZNF331Q9NQX6 463 aaPredicted RBP14.11□□□□□ -0.15
UPF1-212ENST00000601689 GOLT1BQ9Y3E0 138 aa14.11□□□□□ -0.15
UPF1-212ENST00000601689 TIMM9Q9Y5J7 89 aa14.11□□□□□ -0.15
UPF1-212ENST00000601689 TRAV8-2A0A0B4J237 113 aa14.1□□□□□ -0.15
UPF1-212ENST00000601689 ZNF705EA8MWA4 302 aaPredicted RBP14.1□□□□□ -0.15
UPF1-212ENST00000601689 MRPS12O15235 138 aaKnown RBP14.1□□□□□ -0.15
UPF1-212ENST00000601689 GIG44P09565 113 aaPredicted RBP14.1□□□□□ -0.15
UPF1-212ENST00000601689 TMEM14CQ9P0S9 112 aa14.1□□□□□ -0.15
UPF1-212ENST00000601689 TRAV5A0A0B4J249 113 aa14.09□□□□□ -0.15
UPF1-212ENST00000601689 SMIM9A6NGZ8 99 aa14.09□□□□□ -0.15
UPF1-212ENST00000601689 ZNF253O75346 499 aa14.09□□□□□ -0.15
UPF1-212ENST00000601689 IGLC2P0DOY2 106 aa14.09□□□□□ -0.15
UPF1-212ENST00000601689 HIST1H1EP10412 219 aaKnown RBP14.09□□□□□ -0.15
UPF1-212ENST00000601689 CNN1P51911 297 aaKnown RBP14.09□□□□□ -0.15
UPF1-212ENST00000601689 FXYD7P58549 80 aa14.09□□□□□ -0.15
UPF1-212ENST00000601689 TAS2R45P59539 299 aa14.09□□□□□ -0.15
UPF1-212ENST00000601689 DEFB1P60022 68 aa14.09□□□□□ -0.15
UPF1-212ENST00000601689 HIST1H1AQ02539 215 aaPredicted RBP14.09□□□□□ -0.15
UPF1-212ENST00000601689 FFAR4Q5NUL3 377 aa14.09□□□□□ -0.15
UPF1-212ENST00000601689 MORN5Q5VZ52 161 aa14.09□□□□□ -0.15
UPF1-212ENST00000601689 OR8A1Q8NGG7 326 aa14.09□□□□□ -0.15
UPF1-212ENST00000601689 OR10J6PQ8NGY7 276 aa14.09□□□□□ -0.15
UPF1-212ENST00000601689 C11orf45Q8TAV5 145 aa14.09□□□□□ -0.15
UPF1-212ENST00000601689 RPUSD4Q96CM3 377 aaKnown RBP14.09□□□□□ -0.15
UPF1-212ENST00000601689 C17orf77Q96MU5 243 aa14.09□□□□□ -0.15
UPF1-212ENST00000601689 TMEM208Q9BTX3 173 aa14.09□□□□□ -0.15
UPF1-212ENST00000601689 AAMDCQ9H7C9 122 aa14.09□□□□□ -0.15
UPF1-212ENST00000601689 DNAH7Q8WXX0 4024 aa14.09□□□□□ -0.15
UPF1-212ENST00000601689 NUPR2A6NF83 97 aa14.08□□□□□ -0.16
UPF1-212ENST00000601689 PMS2P11Q13670 270 aa14.08□□□□□ -0.16
UPF1-212ENST00000601689 PDE6HQ13956 83 aa14.08□□□□□ -0.16
UPF1-212ENST00000601689 ACOT6Q3I5F7 207 aaPredicted RBP14.08□□□□□ -0.16
UPF1-212ENST00000601689 CSNK1G2-AS1Q8NCQ2 148 aa14.08□□□□□ -0.16
UPF1-212ENST00000601689 AQP10Q96PS8 301 aa14.08□□□□□ -0.16
UPF1-212ENST00000601689 PRELID1Q9Y255 219 aa14.08□□□□□ -0.16
UPF1-212ENST00000601689 IGHV3OR16-12A0A075B7B8 117 aa14.07□□□□□ -0.16
UPF1-212ENST00000601689 SNRPCP09234 159 aaKnown RBP14.07□□□□□ -0.16
UPF1-212ENST00000601689 OR2T35Q8NGX2 323 aa14.07□□□□□ -0.16
UPF1-212ENST00000601689 SLC35B3Q9H1N7 401 aa14.07□□□□□ -0.16
UPF1-212ENST00000601689 OR51M1Q9H341 326 aa14.07□□□□□ -0.16
UPF1-212ENST00000601689 FUT9Q9Y231 359 aa14.07□□□□□ -0.16
UPF1-212ENST00000601689 KLK5Q9Y337 293 aaPredicted RBP14.07□□□□□ -0.16
UPF1-212ENST00000601689 FXYD6-FXYD2A0A087WZ82 144 aa14.06□□□□□ -0.16
UPF1-212ENST00000601689 A0A1W2PPV4 95 aa14.06□□□□□ -0.16
UPF1-212ENST00000601689 TMEM189A5PLL7 270 aa14.06□□□□□ -0.16
UPF1-212ENST00000601689 NEU1Q99519 415 aa14.06□□□□□ -0.16
UPF1-212ENST00000601689 TRBV19A0A075B6N1 114 aa14.05□□□□□ -0.16
UPF1-212ENST00000601689 IGHV4-28A0A0C4DH34 117 aa14.05□□□□□ -0.16
UPF1-212ENST00000601689 H3BQ15 152 aa14.05□□□□□ -0.16
UPF1-212ENST00000601689 H3BTX0 84 aa14.05□□□□□ -0.16
UPF1-212ENST00000601689 OR7C2O60412 319 aa14.05□□□□□ -0.16
UPF1-212ENST00000601689 INSP01308 110 aa14.05□□□□□ -0.16
UPF1-212ENST00000601689 HLA-DMBP28068 263 aa14.05□□□□□ -0.16
UPF1-212ENST00000601689 TSPOP30536 169 aa14.05□□□□□ -0.16
UPF1-212ENST00000601689 KHDC3LQ587J8 217 aa14.05□□□□□ -0.16
UPF1-212ENST00000601689 GCSAMLQ5JQS6 135 aa14.05□□□□□ -0.16
UPF1-212ENST00000601689 Q8NAQ8 132 aa14.05□□□□□ -0.16
UPF1-212ENST00000601689 BLNKQ8WV28 456 aa14.05□□□□□ -0.16
UPF1-212ENST00000601689 SAT2Q96F10 170 aaPredicted RBP14.05□□□□□ -0.16
UPF1-212ENST00000601689 IGF2BP2-AS1Q96M15 143 aa14.05□□□□□ -0.16
UPF1-212ENST00000601689 PAXXQ9BUH6 204 aa14.05□□□□□ -0.16
UPF1-212ENST00000601689 ZNF586Q9NXT0 402 aa14.05□□□□□ -0.16
UPF1-212ENST00000601689 BORCS7-ASMTA0A0B4J1R7 106 aa14.04□□□□□ -0.16
UPF1-212ENST00000601689 A8MTW9 85 aa14.04□□□□□ -0.16
UPF1-212ENST00000601689 BOLA2-SMG1P6H3BVE0 249 aa14.04□□□□□ -0.16
UPF1-212ENST00000601689 DEFB4AO15263 64 aa14.04□□□□□ -0.16
UPF1-212ENST00000601689 JTBO76095 146 aa14.04□□□□□ -0.16
UPF1-212ENST00000601689 HBE1P02100 147 aa14.04□□□□□ -0.16
UPF1-212ENST00000601689 ZNF705DP0CH99 300 aaPredicted RBP14.04□□□□□ -0.16
UPF1-212ENST00000601689 ZNF705BP0CI00 300 aaPredicted RBP14.04□□□□□ -0.16
UPF1-212ENST00000601689 ZNF705AQ6ZN79 300 aaPredicted RBP14.04□□□□□ -0.16
UPF1-212ENST00000601689 MIR17HGQ75NE6 70 aa14.04□□□□□ -0.16
UPF1-212ENST00000601689 MRPL53Q96EL3 112 aaKnown RBP14.04□□□□□ -0.16
UPF1-212ENST00000601689 SLC25A2Q9BXI2 301 aa14.04□□□□□ -0.16
UPF1-212ENST00000601689 X6R8D5 127 aa14.04□□□□□ -0.16
UPF1-212ENST00000601689 SLC17A3O00476 420 aa14.03□□□□□ -0.16
UPF1-212ENST00000601689 NBEAP1P0C6P0 100 aa14.03□□□□□ -0.16
UPF1-212ENST00000601689 PYYP10082 97 aa14.03□□□□□ -0.16
UPF1-212ENST00000601689 M6PRP20645 277 aa14.03□□□□□ -0.16
UPF1-212ENST00000601689 SPINK13Q1W4C9 94 aa14.03□□□□□ -0.16
UPF1-212ENST00000601689 RFNGQ9Y644 331 aa14.03□□□□□ -0.16
UPF1-212ENST00000601689 MBP02144 154 aa14.02□□□□□ -0.17
UPF1-212ENST00000601689 CDKN1BP46527 198 aa14.02□□□□□ -0.17
UPF1-212ENST00000601689 RRN3P1Q2M238 152 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms