RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 ODF3L1Q8IXM7 274 aa8.46□□□□□ -1.05
LIG1-220ENST00000601091 TEX50A0A1B0GTY4 177 aa8.46□□□□□ -1.05
LIG1-220ENST00000601091 C17orf100A8MU93 164 aa8.46□□□□□ -1.05
LIG1-220ENST00000601091 C9JCJ5 164 aa8.46□□□□□ -1.05
LIG1-220ENST00000601091 CA7P43166 264 aa8.46□□□□□ -1.05
LIG1-220ENST00000601091 NDUFV3P56181 108 aaKnown RBP8.46□□□□□ -1.05
LIG1-220ENST00000601091 C9orf153Q5TBE3 101 aa8.46□□□□□ -1.05
LIG1-220ENST00000601091 Q6ZUT4 128 aa8.46□□□□□ -1.05
LIG1-220ENST00000601091 FBXL7Q9UJT9 491 aa8.46□□□□□ -1.05
LIG1-220ENST00000601091 SIGLEC9Q9Y336 463 aa8.46□□□□□ -1.05
LIG1-220ENST00000601091 CEP192Q8TEP8 1941 aa8.46□□□□□ -1.06
LIG1-220ENST00000601091 C15orf65H3BRN8 121 aa8.46□□□□□ -1.06
LIG1-220ENST00000601091 IGLV2-14P01704 120 aa8.46□□□□□ -1.06
LIG1-220ENST00000601091 LINC00305Q7Z4B0 112 aa8.46□□□□□ -1.06
LIG1-220ENST00000601091 BPIFA4PQ86YQ2 179 aa8.46□□□□□ -1.06
LIG1-220ENST00000601091 C11orf53Q8IXP5 236 aa8.46□□□□□ -1.06
LIG1-220ENST00000601091 NCBP2LA6PVI3 153 aaKnown RBP8.46□□□□□ -1.06
LIG1-220ENST00000601091 WFDC2Q14508 124 aa8.46□□□□□ -1.06
LIG1-220ENST00000601091 TTC9CQ8N5M4 171 aa8.46□□□□□ -1.06
LIG1-220ENST00000601091 PRSS3P2Q8NHM4 247 aa8.46□□□□□ -1.06
LIG1-220ENST00000601091 SLC25A33Q9BSK2 321 aa8.46□□□□□ -1.06
LIG1-220ENST00000601091 SLC25A39Q9BZJ4 359 aaPredicted RBP8.46□□□□□ -1.06
LIG1-220ENST00000601091 YTHDF2Q9Y5A9 579 aaKnown RBP8.46□□□□□ -1.06
LIG1-220ENST00000601091 TRAV5A0A0B4J249 113 aa8.45□□□□□ -1.06
LIG1-220ENST00000601091 C9orf118A6NHY6 69 aa8.45□□□□□ -1.06
LIG1-220ENST00000601091 NBR2O15453 112 aa8.45□□□□□ -1.06
LIG1-220ENST00000601091 TAL2Q16559 108 aa8.45□□□□□ -1.06
LIG1-220ENST00000601091 MBD3L2Q8NHZ7 208 aaPredicted RBP8.45□□□□□ -1.06
LIG1-220ENST00000601091 SPTBN1Q01082 2364 aaKnown RBP8.45□□□□□ -1.06
LIG1-220ENST00000601091 MED12LQ86YW9 2145 aa8.45□□□□□ -1.06
LIG1-220ENST00000601091 CPAMD8Q8IZJ3 1885 aa8.45□□□□□ -1.06
LIG1-220ENST00000601091 TNFRSF13BO14836 293 aaPredicted RBP8.45□□□□□ -1.06
LIG1-220ENST00000601091 C2orf83Q53S99 150 aa8.45□□□□□ -1.06
LIG1-220ENST00000601091 ZCCHC24Q8N2G6 241 aaKnown RBP8.45□□□□□ -1.06
LIG1-220ENST00000601091 FAM57AQ8TBR7 257 aa8.45□□□□□ -1.06
LIG1-220ENST00000601091 GNB1LQ9BYB4 327 aa8.45□□□□□ -1.06
LIG1-220ENST00000601091 LY96Q9Y6Y9 160 aa8.45□□□□□ -1.06
LIG1-220ENST00000601091 INTS1Q8N201 2190 aaKnown RBP8.45□□□□□ -1.06
LIG1-220ENST00000601091 TRAV9-2A0A087WT02 112 aa8.45□□□□□ -1.06
LIG1-220ENST00000601091 PEX7O00628 323 aa8.45□□□□□ -1.06
LIG1-220ENST00000601091 CSN3P07498 182 aa8.45□□□□□ -1.06
LIG1-220ENST00000601091 ZNF137PP52743 207 aa8.45□□□□□ -1.06
LIG1-220ENST00000601091 TMEM191AQ9H0A3 160 aa8.45□□□□□ -1.06
LIG1-220ENST00000601091 F2Z2F3 143 aa8.44□□□□□ -1.06
LIG1-220ENST00000601091 FRMD6-AS1P0C7T7 363 aa8.44□□□□□ -1.06
LIG1-220ENST00000601091 PRB4P10163 310 aaPredicted RBP8.44□□□□□ -1.06
LIG1-220ENST00000601091 MYOD1P15172 320 aa8.44□□□□□ -1.06
LIG1-220ENST00000601091 TBR1Q16650 682 aa8.44□□□□□ -1.06
LIG1-220ENST00000601091 FAM19A2Q8N3H0 131 aa8.44□□□□□ -1.06
LIG1-220ENST00000601091 OR8B3Q8NGG8 313 aa8.44□□□□□ -1.06
LIG1-220ENST00000601091 DDB2Q92466 427 aa8.44□□□□□ -1.06
LIG1-220ENST00000601091 TMEM101Q96IK0 257 aa8.44□□□□□ -1.06
LIG1-220ENST00000601091 OR8B2Q96RD0 313 aa8.44□□□□□ -1.06
LIG1-220ENST00000601091 TP73-AS1Q9UF72 201 aa8.44□□□□□ -1.06
LIG1-220ENST00000601091 IGLV1-44P01699 117 aa8.44□□□□□ -1.06
LIG1-220ENST00000601091 FOXC1Q12948 553 aa8.44□□□□□ -1.06
LIG1-220ENST00000601091 RIGQ13278 110 aa8.44□□□□□ -1.06
LIG1-220ENST00000601091 ZNF114Q8NC26 417 aa8.44□□□□□ -1.06
LIG1-220ENST00000601091 PYGO2Q9BRQ0 406 aa8.44□□□□□ -1.06
LIG1-220ENST00000601091 PLA2G2CQ5R387 149 aa8.44□□□□□ -1.06
LIG1-220ENST00000601091 PRNTQ86SH4 94 aa8.44□□□□□ -1.06
LIG1-220ENST00000601091 IZUMO1RA6ND01 250 aa8.43□□□□□ -1.06
LIG1-220ENST00000601091 BSPH1Q075Z2 132 aa8.43□□□□□ -1.06
LIG1-220ENST00000601091 VWC2Q2TAL6 325 aa8.43□□□□□ -1.06
LIG1-220ENST00000601091 GPR183P32249 361 aa8.43□□□□□ -1.06
LIG1-220ENST00000601091 ZNF134P52741 427 aa8.43□□□□□ -1.06
LIG1-220ENST00000601091 XGP55808 180 aa8.43□□□□□ -1.06
LIG1-220ENST00000601091 SRSF9Q13242 221 aaKnown RBP eCLIP8.43□□□□□ -1.06
LIG1-220ENST00000601091 C6orf226Q5I0X4 101 aa8.43□□□□□ -1.06
LIG1-220ENST00000601091 TEX45Q8NA69 505 aa8.43□□□□□ -1.06
LIG1-220ENST00000601091 TMEM14BQ9NUH8 114 aa8.43□□□□□ -1.06
LIG1-220ENST00000601091 PRO0628Q9UI54 55 aa8.43□□□□□ -1.06
LIG1-220ENST00000601091 TECTAO75443 2155 aa8.43□□□□□ -1.06
LIG1-220ENST00000601091 APC2O95996 2303 aa8.43□□□□□ -1.06
LIG1-220ENST00000601091 DMDP11532 3685 aa8.43□□□□□ -1.06
LIG1-220ENST00000601091 A0A1W2PRD5 423 aa8.43□□□□□ -1.06
LIG1-220ENST00000601091 A0A1W2PRF3 423 aa8.43□□□□□ -1.06
LIG1-220ENST00000601091 A0A1W2PRM7 423 aa8.43□□□□□ -1.06
LIG1-220ENST00000601091 H3BTX0 84 aa8.43□□□□□ -1.06
LIG1-220ENST00000601091 SAMD5Q5TGI4 173 aa8.43□□□□□ -1.06
LIG1-220ENST00000601091 IGKV1-16P04430 117 aa8.42□□□□□ -1.06
LIG1-220ENST00000601091 PYYP10082 97 aa8.42□□□□□ -1.06
LIG1-220ENST00000601091 SLC25A48Q6ZT89 311 aaKnown RBP8.42□□□□□ -1.06
LIG1-220ENST00000601091 ZNF295-AS1Q8N0V1 137 aa8.42□□□□□ -1.06
LIG1-220ENST00000601091 GNB4Q9HAV0 340 aa8.42□□□□□ -1.06
LIG1-220ENST00000601091 C1RLQ9NZP8 487 aa8.42□□□□□ -1.06
LIG1-220ENST00000601091 IGLC6P0CF74 106 aa8.42□□□□□ -1.06
LIG1-220ENST00000601091 SEC11AP67812 179 aa8.42□□□□□ -1.06
LIG1-220ENST00000601091 PGLYRP4Q96LB8 373 aa8.42□□□□□ -1.06
LIG1-220ENST00000601091 KIR2DL4Q99706 377 aa8.42□□□□□ -1.06
LIG1-220ENST00000601091 COL5A1P20908 1838 aaPredicted RBP8.42□□□□□ -1.06
LIG1-220ENST00000601091 A0A1W2PNU3 283 aaPredicted RBP8.42□□□□□ -1.06
LIG1-220ENST00000601091 TCRBV4S1A1TA0A5B7 111 aa8.42□□□□□ -1.06
LIG1-220ENST00000601091 IGLL1P15814 213 aa8.42□□□□□ -1.06
LIG1-220ENST00000601091 GAFA1Q96PS6 74 aa8.42□□□□□ -1.06
LIG1-220ENST00000601091 CLEC7AQ9BXN2 247 aa8.42□□□□□ -1.06
LIG1-220ENST00000601091 LOC400499M0QZD8 3231 aa8.42□□□□□ -1.06
LIG1-220ENST00000601091 PMS2P5A8MQ11 134 aa8.41□□□□□ -1.06
LIG1-220ENST00000601091 DAZAP2Q15038 168 aaPredicted RBP8.41□□□□□ -1.06
LIG1-220ENST00000601091 MLANAQ16655 118 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms