RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 B9D2Q9BPU9 175 aa8.73□□□□□ -1.01
CHMP2A-207ENST00000600804 FAM110AQ9BQ89 295 aa8.73□□□□□ -1.01
CHMP2A-207ENST00000600804 SLC25A22Q9H936 323 aa8.73□□□□□ -1.01
CHMP2A-207ENST00000600804 SMAD5-AS1Q9Y6J3 95 aa8.73□□□□□ -1.01
CHMP2A-207ENST00000600804 TRAV1-1A0A0B4J248 108 aa8.72□□□□□ -1.01
CHMP2A-207ENST00000600804 ZNF785A8K8V0 405 aa8.72□□□□□ -1.01
CHMP2A-207ENST00000600804 HIST1H1EP10412 219 aaKnown RBP8.72□□□□□ -1.01
CHMP2A-207ENST00000600804 ZNF726P1Q15940 193 aa8.72□□□□□ -1.01
CHMP2A-207ENST00000600804 FAM122CQ6P4D5 195 aa8.72□□□□□ -1.01
CHMP2A-207ENST00000600804 TEX261Q6UWH6 196 aa8.72□□□□□ -1.01
CHMP2A-207ENST00000600804 DCANP1Q8TF63 244 aa8.72□□□□□ -1.01
CHMP2A-207ENST00000600804 RNF141Q8WVD5 230 aa8.72□□□□□ -1.01
CHMP2A-207ENST00000600804 PAXXQ9BUH6 204 aa8.72□□□□□ -1.01
CHMP2A-207ENST00000600804 MS4A6AQ9H2W1 248 aa8.72□□□□□ -1.01
CHMP2A-207ENST00000600804 OR51M1Q9H341 326 aa8.72□□□□□ -1.01
CHMP2A-207ENST00000600804 CLEC5AQ9NY25 188 aa8.72□□□□□ -1.01
CHMP2A-207ENST00000600804 ZNF256Q9Y2P7 627 aaPredicted RBP8.72□□□□□ -1.01
CHMP2A-207ENST00000600804 TRAV5A0A0B4J249 113 aa8.71□□□□□ -1.02
CHMP2A-207ENST00000600804 IZUMO1RA6ND01 250 aa8.71□□□□□ -1.02
CHMP2A-207ENST00000600804 OR4C46A6NHA9 309 aa8.71□□□□□ -1.02
CHMP2A-207ENST00000600804 K7EQG2 157 aa8.71□□□□□ -1.02
CHMP2A-207ENST00000600804 SOCS3O14543 225 aa8.71□□□□□ -1.02
CHMP2A-207ENST00000600804 ATF4P18848 351 aaPredicted RBP8.71□□□□□ -1.02
CHMP2A-207ENST00000600804 LCN15Q6UWW0 184 aa8.71□□□□□ -1.02
CHMP2A-207ENST00000600804 LRRC20Q8TCA0 184 aa8.71□□□□□ -1.02
CHMP2A-207ENST00000600804 FXYD5Q96DB9 178 aa8.71□□□□□ -1.02
CHMP2A-207ENST00000600804 SAT2Q96F10 170 aaPredicted RBP8.71□□□□□ -1.02
CHMP2A-207ENST00000600804 ZNF503Q96F45 646 aa8.71□□□□□ -1.02
CHMP2A-207ENST00000600804 TRBV19A0A075B6N1 114 aa8.7□□□□□ -1.02
CHMP2A-207ENST00000600804 ISLRO14498 428 aa8.7□□□□□ -1.02
CHMP2A-207ENST00000600804 CXorf1O96002 111 aa8.7□□□□□ -1.02
CHMP2A-207ENST00000600804 IFNA7P01567 189 aa8.7□□□□□ -1.02
CHMP2A-207ENST00000600804 NBEAP1P0C6P0 100 aa8.7□□□□□ -1.02
CHMP2A-207ENST00000600804 CMC4P56277 68 aaPredicted RBP8.7□□□□□ -1.02
CHMP2A-207ENST00000600804 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.7□□□□□ -1.02
CHMP2A-207ENST00000600804 SSX7Q7RTT5 188 aa8.7□□□□□ -1.02
CHMP2A-207ENST00000600804 ZNF680Q8NEM1 530 aa8.7□□□□□ -1.02
CHMP2A-207ENST00000600804 SLC50A1Q9BRV3 221 aa8.7□□□□□ -1.02
CHMP2A-207ENST00000600804 TMEM167BQ9NRX6 74 aa8.7□□□□□ -1.02
CHMP2A-207ENST00000600804 MAP1LC3B2A6NCE7 125 aa8.69□□□□□ -1.02
CHMP2A-207ENST00000600804 H3BQ15 152 aa8.69□□□□□ -1.02
CHMP2A-207ENST00000600804 DNASE2O00115 360 aaPredicted RBP8.69□□□□□ -1.02
CHMP2A-207ENST00000600804 OR7C2O60412 319 aa8.69□□□□□ -1.02
CHMP2A-207ENST00000600804 ARL14EPLP0DKL9 152 aa8.69□□□□□ -1.02
CHMP2A-207ENST00000600804 PSMB3P49720 205 aa8.69□□□□□ -1.02
CHMP2A-207ENST00000600804 FHITP49789 147 aa8.69□□□□□ -1.02
CHMP2A-207ENST00000600804 RPL11P62913 178 aaKnown RBP8.69□□□□□ -1.02
CHMP2A-207ENST00000600804 PMS2P11Q13670 270 aa8.69□□□□□ -1.02
CHMP2A-207ENST00000600804 ALKAL2Q6UX46 152 aa8.69□□□□□ -1.02
CHMP2A-207ENST00000600804 LYPD1Q8N2G4 141 aa8.69□□□□□ -1.02
CHMP2A-207ENST00000600804 FAM213BQ8TBF2 198 aa8.69□□□□□ -1.02
CHMP2A-207ENST00000600804 MAP1LC3BQ9GZQ8 125 aa8.69□□□□□ -1.02
CHMP2A-207ENST00000600804 ZNF331Q9NQX6 463 aaPredicted RBP8.69□□□□□ -1.02
CHMP2A-207ENST00000600804 ZNF586Q9NXT0 402 aa8.69□□□□□ -1.02
CHMP2A-207ENST00000600804 ARL2-SNX15V9GYD0 113 aa8.69□□□□□ -1.02
CHMP2A-207ENST00000600804 TEX46H3BTG2 121 aa8.68□□□□□ -1.02
CHMP2A-207ENST00000600804 HBE1P02100 147 aa8.68□□□□□ -1.02
CHMP2A-207ENST00000600804 H2AFB1P0C5Y9 115 aa8.68□□□□□ -1.02
CHMP2A-207ENST00000600804 PYYP10082 97 aa8.68□□□□□ -1.02
CHMP2A-207ENST00000600804 GCHFRP30047 84 aa8.68□□□□□ -1.02
CHMP2A-207ENST00000600804 ID1P41134 155 aa8.68□□□□□ -1.02
CHMP2A-207ENST00000600804 SNRPD3P62318 126 aaKnown RBP8.68□□□□□ -1.02
CHMP2A-207ENST00000600804 UBE2L3P68036 154 aaKnown RBP8.68□□□□□ -1.02
CHMP2A-207ENST00000600804 BLOC1S1P78537 153 aa8.68□□□□□ -1.02
CHMP2A-207ENST00000600804 PSG9Q00887 426 aa8.68□□□□□ -1.02
CHMP2A-207ENST00000600804 GUCA2BQ16661 112 aa8.68□□□□□ -1.02
CHMP2A-207ENST00000600804 FAM74A1Q5RGS3 127 aa8.68□□□□□ -1.02
CHMP2A-207ENST00000600804 ARL6IP6Q8N6S5 226 aa8.68□□□□□ -1.02
CHMP2A-207ENST00000600804 LYPD6BQ8NI32 183 aa8.68□□□□□ -1.02
CHMP2A-207ENST00000600804 ZNF705EA8MWA4 302 aaPredicted RBP8.67□□□□□ -1.02
CHMP2A-207ENST00000600804 HMGB3O15347 200 aaKnown RBP8.67□□□□□ -1.02
CHMP2A-207ENST00000600804 NDUFB4O95168 129 aa8.67□□□□□ -1.02
CHMP2A-207ENST00000600804 PPT1P50897 306 aa8.67□□□□□ -1.02
CHMP2A-207ENST00000600804 SFT2D1Q8WV19 159 aa8.67□□□□□ -1.02
CHMP2A-207ENST00000600804 MRPL53Q96EL3 112 aaKnown RBP8.67□□□□□ -1.02
CHMP2A-207ENST00000600804 C19orf73Q9NVV2 129 aa8.67□□□□□ -1.02
CHMP2A-207ENST00000600804 UBQLN2Q9UHD9 624 aa8.67□□□□□ -1.02
CHMP2A-207ENST00000600804 PRELID1Q9Y255 219 aa8.67□□□□□ -1.02
CHMP2A-207ENST00000600804 AGRNO00468 2067 aa8.66□□□□□ -1.02
CHMP2A-207ENST00000600804 IGKV3-7A0A075B6H7 116 aa8.66□□□□□ -1.02
CHMP2A-207ENST00000600804 TRAV8-2A0A0B4J237 113 aa8.66□□□□□ -1.02
CHMP2A-207ENST00000600804 A0A1W2PRE2 83 aa8.66□□□□□ -1.02
CHMP2A-207ENST00000600804 OR10J4P0C629 311 aa8.66□□□□□ -1.02
CHMP2A-207ENST00000600804 ZNF767PQ75MW2 155 aa8.66□□□□□ -1.02
CHMP2A-207ENST00000600804 GTSCR1Q86UQ5 136 aa8.66□□□□□ -1.02
CHMP2A-207ENST00000600804 GBGT1Q8N5D6 347 aa8.66□□□□□ -1.02
CHMP2A-207ENST00000600804 C16orf92Q96LL3 132 aa8.66□□□□□ -1.02
CHMP2A-207ENST00000600804 NKX6-2Q9C056 277 aaPredicted RBP8.66□□□□□ -1.02
CHMP2A-207ENST00000600804 SLC17A3O00476 420 aa8.65□□□□□ -1.02
CHMP2A-207ENST00000600804 EIF3GO75821 320 aaKnown RBP eCLIP8.65□□□□□ -1.02
CHMP2A-207ENST00000600804 ODF3L2Q3SX64 289 aa8.65□□□□□ -1.02
CHMP2A-207ENST00000600804 Q8N1Y9 231 aa8.65□□□□□ -1.02
CHMP2A-207ENST00000600804 AAMDCQ9H7C9 122 aa8.65□□□□□ -1.02
CHMP2A-207ENST00000600804 MAP6D1Q9H9H5 199 aa8.65□□□□□ -1.02
CHMP2A-207ENST00000600804 OTORQ9NRC9 128 aa8.65□□□□□ -1.02
CHMP2A-207ENST00000600804 SELENOKQ9Y6D0 94 aa8.65□□□□□ -1.02
CHMP2A-207ENST00000600804 U3KQK5 164 aa8.65□□□□□ -1.02
CHMP2A-207ENST00000600804 OR11H12B2RN74 326 aa8.64□□□□□ -1.03
CHMP2A-207ENST00000600804 TAGLN2P37802 199 aaKnown RBP8.64□□□□□ -1.03
CHMP2A-207ENST00000600804 TFPI2P48307 235 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms