RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 HLA-DRB4X5D2U9 266 aa8.28□□□□□ -1.08
HIF3A-217ENST00000600236 IGHV4-4A0A075B6R2 117 aa8.27□□□□□ -1.09
HIF3A-217ENST00000600236 ELOA3CA0A087WX78 387 aaPredicted RBP8.27□□□□□ -1.09
HIF3A-217ENST00000600236 RAB19A4D1S5 217 aa8.27□□□□□ -1.09
HIF3A-217ENST00000600236 H3BMM0 161 aa8.27□□□□□ -1.09
HIF3A-217ENST00000600236 IAPPP10997 89 aa8.27□□□□□ -1.09
HIF3A-217ENST00000600236 S100A7P31151 101 aa8.27□□□□□ -1.09
HIF3A-217ENST00000600236 PSMB3P49720 205 aa8.27□□□□□ -1.09
HIF3A-217ENST00000600236 HBG1P69891 147 aa8.27□□□□□ -1.09
HIF3A-217ENST00000600236 HBG2P69892 147 aa8.27□□□□□ -1.09
HIF3A-217ENST00000600236 BLOC1S1P78537 153 aa8.27□□□□□ -1.09
HIF3A-217ENST00000600236 GAMTQ14353 236 aa8.27□□□□□ -1.09
HIF3A-217ENST00000600236 TOR2AQ5JU69 321 aa8.27□□□□□ -1.09
HIF3A-217ENST00000600236 C1orf194Q5T5A4 169 aa8.27□□□□□ -1.09
HIF3A-217ENST00000600236 LYPD6BQ8NI32 183 aa8.27□□□□□ -1.09
HIF3A-217ENST00000600236 GNPNAT1Q96EK6 184 aaPredicted RBP8.27□□□□□ -1.09
HIF3A-217ENST00000600236 XCL2Q9UBD3 114 aa8.27□□□□□ -1.09
HIF3A-217ENST00000600236 STRAPQ9Y3F4 350 aaKnown RBP8.27□□□□□ -1.09
HIF3A-217ENST00000600236 TMEM189A5PLL7 270 aa8.26□□□□□ -1.09
HIF3A-217ENST00000600236 UMAD1C9J7I0 102 aa8.26□□□□□ -1.09
HIF3A-217ENST00000600236 CST7O76096 145 aa8.26□□□□□ -1.09
HIF3A-217ENST00000600236 ZNF90Q03938 601 aa8.26□□□□□ -1.09
HIF3A-217ENST00000600236 CLINT1Q14677 625 aa8.26□□□□□ -1.09
HIF3A-217ENST00000600236 SPATA31B1PQ5VZV4 182 aa8.26□□□□□ -1.09
HIF3A-217ENST00000600236 UQCC3Q6UW78 93 aa8.26□□□□□ -1.09
HIF3A-217ENST00000600236 FOXI2Q6ZQN5 318 aa8.26□□□□□ -1.09
HIF3A-217ENST00000600236 LINC00052Q96N35 136 aa8.26□□□□□ -1.09
HIF3A-217ENST00000600236 TRGV9Q99603 122 aa8.26□□□□□ -1.09
HIF3A-217ENST00000600236 PLA2G2EQ9NZK7 142 aa8.26□□□□□ -1.09
HIF3A-217ENST00000600236 DEFB131BA0A096LNP1 70 aa8.25□□□□□ -1.09
HIF3A-217ENST00000600236 TEX48A0A1B0GUV7 120 aa8.25□□□□□ -1.09
HIF3A-217ENST00000600236 SMIM9A6NGZ8 99 aa8.25□□□□□ -1.09
HIF3A-217ENST00000600236 PMS2P5A8MQ11 134 aa8.25□□□□□ -1.09
HIF3A-217ENST00000600236 H3BP45 60 aa8.25□□□□□ -1.09
HIF3A-217ENST00000600236 AMBPP02760 352 aa8.25□□□□□ -1.09
HIF3A-217ENST00000600236 ATP6V0CP27449 155 aa8.25□□□□□ -1.09
HIF3A-217ENST00000600236 MEOX2P50222 304 aa8.25□□□□□ -1.09
HIF3A-217ENST00000600236 PRR20EP86478 221 aa8.25□□□□□ -1.09
HIF3A-217ENST00000600236 PRR20CP86479 221 aa8.25□□□□□ -1.09
HIF3A-217ENST00000600236 PRR20DP86480 221 aa8.25□□□□□ -1.09
HIF3A-217ENST00000600236 PRR20BP86481 221 aa8.25□□□□□ -1.09
HIF3A-217ENST00000600236 PRR20AP86496 221 aa8.25□□□□□ -1.09
HIF3A-217ENST00000600236 ARL16Q0P5N6 197 aa8.25□□□□□ -1.09
HIF3A-217ENST00000600236 ATP6V1FQ16864 119 aa8.25□□□□□ -1.09
HIF3A-217ENST00000600236 EBLN2Q6P2I7 272 aa8.25□□□□□ -1.09
HIF3A-217ENST00000600236 OR8I2Q8N0Y5 310 aa8.25□□□□□ -1.09
HIF3A-217ENST00000600236 NEU1Q99519 415 aa8.25□□□□□ -1.09
HIF3A-217ENST00000600236 SAV1Q9H4B6 383 aaPredicted RBP8.25□□□□□ -1.09
HIF3A-217ENST00000600236 IGKV1D-37A0A075B6S9 117 aa8.24□□□□□ -1.09
HIF3A-217ENST00000600236 KRBOX1C9JBD0 128 aa8.24□□□□□ -1.09
HIF3A-217ENST00000600236 ISLRO14498 428 aa8.24□□□□□ -1.09
HIF3A-217ENST00000600236 IFNA5P01569 189 aa8.24□□□□□ -1.09
HIF3A-217ENST00000600236 IGKV3-20P01619 116 aa8.24□□□□□ -1.09
HIF3A-217ENST00000600236 METTL15P1P0C7V9 234 aa8.24□□□□□ -1.09
HIF3A-217ENST00000600236 SPART-AS1P0CW21 52 aa8.24□□□□□ -1.09
HIF3A-217ENST00000600236 P0DMU3 169 aa8.24□□□□□ -1.09
HIF3A-217ENST00000600236 FAM231AP0DMU4 169 aa8.24□□□□□ -1.09
HIF3A-217ENST00000600236 FAM231CP0DMU5 169 aa8.24□□□□□ -1.09
HIF3A-217ENST00000600236 GALR1P47211 349 aa8.24□□□□□ -1.09
HIF3A-217ENST00000600236 SLC38A11Q08AI6 406 aa8.24□□□□□ -1.09
HIF3A-217ENST00000600236 VWC2Q2TAL6 325 aa8.24□□□□□ -1.09
HIF3A-217ENST00000600236 C12orf74Q32Q52 190 aa8.24□□□□□ -1.09
HIF3A-217ENST00000600236 SPANXN5Q5MJ07 72 aa8.24□□□□□ -1.09
HIF3A-217ENST00000600236 PXDC1Q5TGL8 231 aa8.24□□□□□ -1.09
HIF3A-217ENST00000600236 DPPA3Q6W0C5 159 aa8.24□□□□□ -1.09
HIF3A-217ENST00000600236 ZNF705AQ6ZN79 300 aaPredicted RBP8.24□□□□□ -1.09
HIF3A-217ENST00000600236 HSD17B11Q8NBQ5 300 aa8.24□□□□□ -1.09
HIF3A-217ENST00000600236 OR4B1Q8NGF8 309 aa8.24□□□□□ -1.09
HIF3A-217ENST00000600236 CLUHP3Q96NS8 147 aa8.24□□□□□ -1.09
HIF3A-217ENST00000600236 PSMG3Q9BT73 122 aaPredicted RBP8.24□□□□□ -1.09
HIF3A-217ENST00000600236 NDUFAF3Q9BU61 184 aa8.24□□□□□ -1.09
HIF3A-217ENST00000600236 TMEM147Q9BVK8 224 aa8.24□□□□□ -1.09
HIF3A-217ENST00000600236 SH3BGRL3Q9H299 93 aa8.24□□□□□ -1.09
HIF3A-217ENST00000600236 SLC45A2Q9UMX9 530 aa8.24□□□□□ -1.09
HIF3A-217ENST00000600236 CELA1Q9UNI1 258 aa8.24□□□□□ -1.09
HIF3A-217ENST00000600236 GOLT1BQ9Y3E0 138 aa8.24□□□□□ -1.09
HIF3A-217ENST00000600236 RFNGQ9Y644 331 aa8.24□□□□□ -1.09
HIF3A-217ENST00000600236 IGHV3OR16-12A0A075B7B8 117 aa8.23□□□□□ -1.09
HIF3A-217ENST00000600236 TEX46H3BTG2 121 aa8.23□□□□□ -1.09
HIF3A-217ENST00000600236 AKR1C1Q04828 323 aa8.23□□□□□ -1.09
HIF3A-217ENST00000600236 Q6ZRG5 221 aa8.23□□□□□ -1.09
HIF3A-217ENST00000600236 THAP8Q8NA92 274 aa8.23□□□□□ -1.09
HIF3A-217ENST00000600236 BPIFCQ8NFQ6 507 aa8.23□□□□□ -1.09
HIF3A-217ENST00000600236 C16orf92Q96LL3 132 aa8.23□□□□□ -1.09
HIF3A-217ENST00000600236 GGACTQ9BVM4 153 aa8.23□□□□□ -1.09
HIF3A-217ENST00000600236 RPRMQ9NS64 109 aa8.23□□□□□ -1.09
HIF3A-217ENST00000600236 TIMM9Q9Y5J7 89 aa8.23□□□□□ -1.09
HIF3A-217ENST00000600236 ZNF705FA8MVS1 300 aaPredicted RBP8.22□□□□□ -1.09
HIF3A-217ENST00000600236 SOCS3O14543 225 aa8.22□□□□□ -1.09
HIF3A-217ENST00000600236 ZNF705DP0CH99 300 aaPredicted RBP8.22□□□□□ -1.09
HIF3A-217ENST00000600236 ZNF705BP0CI00 300 aaPredicted RBP8.22□□□□□ -1.09
HIF3A-217ENST00000600236 EMP1P54849 157 aa8.22□□□□□ -1.09
HIF3A-217ENST00000600236 FXYD7P58549 80 aa8.22□□□□□ -1.09
HIF3A-217ENST00000600236 PSG9Q00887 426 aa8.22□□□□□ -1.09
HIF3A-217ENST00000600236 GDF5OSQ5U4N7 250 aa8.22□□□□□ -1.09
HIF3A-217ENST00000600236 OR10P1Q8NGE3 313 aa8.22□□□□□ -1.09
HIF3A-217ENST00000600236 OR2G3Q8NGZ4 309 aa8.22□□□□□ -1.09
HIF3A-217ENST00000600236 GPR82Q96P67 336 aa8.22□□□□□ -1.09
HIF3A-217ENST00000600236 WDR61Q9GZS3 305 aaKnown RBP8.22□□□□□ -1.09
HIF3A-217ENST00000600236 SLC25A22Q9H936 323 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms