RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 SRSF3P84103 164 aaKnown RBP9.55□□□□□ -0.88
UPF1-208ENST00000600012 GUK1Q16774 197 aa9.55□□□□□ -0.88
UPF1-208ENST00000600012 S100A7AQ86SG5 101 aa9.55□□□□□ -0.88
UPF1-208ENST00000600012 FXYD5Q96DB9 178 aa9.55□□□□□ -0.88
UPF1-208ENST00000600012 FAM210AQ96ND0 272 aa9.55□□□□□ -0.88
UPF1-208ENST00000600012 TM2D3Q9BRN9 247 aa9.55□□□□□ -0.88
UPF1-208ENST00000600012 U3KQE9 123 aa9.55□□□□□ -0.88
UPF1-208ENST00000600012 IGHV7-4-1A0A0J9YVY3 117 aa9.54□□□□□ -0.88
UPF1-208ENST00000600012 LOC102723971A0A1B0GUV8 181 aa9.54□□□□□ -0.88
UPF1-208ENST00000600012 MRPS12O15235 138 aaKnown RBP9.54□□□□□ -0.88
UPF1-208ENST00000600012 BUB3O43684 328 aa9.54□□□□□ -0.88
UPF1-208ENST00000600012 IFNA1P01562 189 aa9.54□□□□□ -0.88
UPF1-208ENST00000600012 BCL2P10415 239 aa9.54□□□□□ -0.88
UPF1-208ENST00000600012 PSMB3P49720 205 aa9.54□□□□□ -0.88
UPF1-208ENST00000600012 BPIFA4PQ86YQ2 179 aa9.54□□□□□ -0.88
UPF1-208ENST00000600012 OR8I2Q8N0Y5 310 aa9.54□□□□□ -0.88
UPF1-208ENST00000600012 RARRES2Q99969 163 aa9.54□□□□□ -0.88
UPF1-208ENST00000600012 DAZ1Q9NQZ3 744 aaKnown RBP9.54□□□□□ -0.88
UPF1-208ENST00000600012 TMEM167BQ9NRX6 74 aa9.54□□□□□ -0.88
UPF1-208ENST00000600012 UFC1Q9Y3C8 167 aa9.54□□□□□ -0.88
UPF1-208ENST00000600012 TMEM213A2RRL7 107 aa9.53□□□□□ -0.88
UPF1-208ENST00000600012 RAB19A4D1S5 217 aa9.53□□□□□ -0.88
UPF1-208ENST00000600012 RBFOX3A6NFN3 312 aa9.53□□□□□ -0.88
UPF1-208ENST00000600012 A8MWP6 167 aa9.53□□□□□ -0.88
UPF1-208ENST00000600012 H3BQ15 152 aa9.53□□□□□ -0.88
UPF1-208ENST00000600012 K7EMT4 169 aa9.53□□□□□ -0.88
UPF1-208ENST00000600012 LGALS9O00182 355 aa9.53□□□□□ -0.88
UPF1-208ENST00000600012 PAGE4O60829 102 aa9.53□□□□□ -0.88
UPF1-208ENST00000600012 S100A7P31151 101 aa9.53□□□□□ -0.88
UPF1-208ENST00000600012 KLF5Q13887 457 aaPredicted RBP9.53□□□□□ -0.88
UPF1-208ENST00000600012 ICAM4Q14773 271 aa9.53□□□□□ -0.88
UPF1-208ENST00000600012 STXBP6Q8NFX7 210 aa9.53□□□□□ -0.88
UPF1-208ENST00000600012 RXFP4Q8TDU9 374 aa9.53□□□□□ -0.88
UPF1-208ENST00000600012 BLNKQ8WV28 456 aa9.53□□□□□ -0.88
UPF1-208ENST00000600012 NARS2Q96I59 477 aaKnown RBP9.53□□□□□ -0.88
UPF1-208ENST00000600012 ELOVL1Q9BW60 279 aa9.53□□□□□ -0.88
UPF1-208ENST00000600012 EIF5A2Q9GZV4 153 aaKnown RBP9.53□□□□□ -0.88
UPF1-208ENST00000600012 MANBALQ9NQG1 85 aa9.53□□□□□ -0.88
UPF1-208ENST00000600012 TMEM14CQ9P0S9 112 aa9.53□□□□□ -0.88
UPF1-208ENST00000600012 YTHDF2Q9Y5A9 579 aaKnown RBP9.53□□□□□ -0.88
UPF1-208ENST00000600012 SELENOKQ9Y6D0 94 aa9.53□□□□□ -0.88
UPF1-208ENST00000600012 A8MZ25 164 aa9.52□□□□□ -0.89
UPF1-208ENST00000600012 IGLV1-51P01701 117 aa9.52□□□□□ -0.89
UPF1-208ENST00000600012 IGLC2P0DOY2 106 aa9.52□□□□□ -0.89
UPF1-208ENST00000600012 IGHV4-30-4P0DP06 118 aa9.52□□□□□ -0.89
UPF1-208ENST00000600012 HIST1H1EP10412 219 aaKnown RBP9.52□□□□□ -0.89
UPF1-208ENST00000600012 RPL7P18124 248 aaKnown RBP9.52□□□□□ -0.89
UPF1-208ENST00000600012 ATP5G3P48201 142 aa9.52□□□□□ -0.89
UPF1-208ENST00000600012 PPT1P50897 306 aa9.52□□□□□ -0.89
UPF1-208ENST00000600012 ZNF506Q5JVG8 444 aa9.52□□□□□ -0.89
UPF1-208ENST00000600012 C16orf54Q6UWD8 224 aa9.52□□□□□ -0.89
UPF1-208ENST00000600012 SUN5Q8TC36 379 aa9.52□□□□□ -0.89
UPF1-208ENST00000600012 GLMPQ8WWB7 406 aa9.52□□□□□ -0.89
UPF1-208ENST00000600012 TREM1Q9NP99 234 aa9.52□□□□□ -0.89
UPF1-208ENST00000600012 ZNF586Q9NXT0 402 aa9.52□□□□□ -0.89
UPF1-208ENST00000600012 SMPXQ9UHP9 88 aa9.52□□□□□ -0.89
UPF1-208ENST00000600012 C2orf70A6NJV1 201 aa9.51□□□□□ -0.89
UPF1-208ENST00000600012 FAM74A7A6NL05 159 aa9.51□□□□□ -0.89
UPF1-208ENST00000600012 C9JQL5 133 aa9.51□□□□□ -0.89
UPF1-208ENST00000600012 CHEK1O14757 476 aa9.51□□□□□ -0.89
UPF1-208ENST00000600012 NBEAP1P0C6P0 100 aa9.51□□□□□ -0.89
UPF1-208ENST00000600012 ATF4P18848 351 aaPredicted RBP9.51□□□□□ -0.89
UPF1-208ENST00000600012 PMS2P11Q13670 270 aa9.51□□□□□ -0.89
UPF1-208ENST00000600012 CST9LP1Q5W188 147 aa9.51□□□□□ -0.89
UPF1-208ENST00000600012 ZFAND6Q6FIF0 208 aa9.51□□□□□ -0.89
UPF1-208ENST00000600012 Q8N1Y9 231 aa9.51□□□□□ -0.89
UPF1-208ENST00000600012 GRAMD2BQ96HH9 432 aa9.51□□□□□ -0.89
UPF1-208ENST00000600012 C17orf77Q96MU5 243 aa9.51□□□□□ -0.89
UPF1-208ENST00000600012 RHPN1-AS1Q9BWJ2 59 aa9.51□□□□□ -0.89
UPF1-208ENST00000600012 EDA2RQ9HAV5 297 aa9.51□□□□□ -0.89
UPF1-208ENST00000600012 C19orf73Q9NVV2 129 aa9.51□□□□□ -0.89
UPF1-208ENST00000600012 VAX2Q9UIW0 290 aa9.51□□□□□ -0.89
UPF1-208ENST00000600012 RNF24Q9Y225 148 aa9.51□□□□□ -0.89
UPF1-208ENST00000600012 A0A1W2PS18 150 aa9.5□□□□□ -0.89
UPF1-208ENST00000600012 SLC17A3O00476 420 aa9.5□□□□□ -0.89
UPF1-208ENST00000600012 ATP6V1G1O75348 118 aa9.5□□□□□ -0.89
UPF1-208ENST00000600012 PEA15Q15121 130 aa9.5□□□□□ -0.89
UPF1-208ENST00000600012 C1orf194Q5T5A4 169 aa9.5□□□□□ -0.89
UPF1-208ENST00000600012 SIGLEC15Q6ZMC9 328 aa9.5□□□□□ -0.89
UPF1-208ENST00000600012 EIF4E3Q8N5X7 224 aaKnown RBP9.5□□□□□ -0.89
UPF1-208ENST00000600012 OR9G4Q8NGQ1 327 aa9.5□□□□□ -0.89
UPF1-208ENST00000600012 SACSQ9NZJ4 4579 aa9.49□□□□□ -0.89
UPF1-208ENST00000600012 TRBV19A0A075B6N1 114 aa9.49□□□□□ -0.89
UPF1-208ENST00000600012 ZNF785A8K8V0 405 aa9.49□□□□□ -0.89
UPF1-208ENST00000600012 GGTLC3B5MD39 225 aa9.49□□□□□ -0.89
UPF1-208ENST00000600012 C11orf94C9JXX5 98 aa9.49□□□□□ -0.89
UPF1-208ENST00000600012 NDUFB4O95168 129 aa9.49□□□□□ -0.89
UPF1-208ENST00000600012 CD5P06127 495 aa9.49□□□□□ -0.89
UPF1-208ENST00000600012 FOLR2P14207 255 aa9.49□□□□□ -0.89
UPF1-208ENST00000600012 GALR1P47211 349 aa9.49□□□□□ -0.89
UPF1-208ENST00000600012 CD81P60033 236 aa9.49□□□□□ -0.89
UPF1-208ENST00000600012 MEF2BQ02080 365 aaPredicted RBP9.49□□□□□ -0.89
UPF1-208ENST00000600012 UQCC3Q6UW78 93 aa9.49□□□□□ -0.89
UPF1-208ENST00000600012 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.49□□□□□ -0.89
UPF1-208ENST00000600012 ADAMTSL5Q6ZMM2 481 aa9.49□□□□□ -0.89
UPF1-208ENST00000600012 GPR82Q96P67 336 aa9.49□□□□□ -0.89
UPF1-208ENST00000600012 SPATA25Q9BR10 227 aa9.49□□□□□ -0.89
UPF1-208ENST00000600012 PEMTQ9UBM1 199 aa9.49□□□□□ -0.89
UPF1-208ENST00000600012 IGKV3-7A0A075B6H7 116 aa9.48□□□□□ -0.89
UPF1-208ENST00000600012 A0A087X0K7 114 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms