RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 C1QBP02746 253 aa14.97□□□□□ -0.01
PNKP-211ENST00000598020 HIST1H1EP10412 219 aaKnown RBP14.97□□□□□ -0.01
PNKP-211ENST00000598020 FOXI2Q6ZQN5 318 aa14.97□□□□□ -0.01
PNKP-211ENST00000598020 TRPT1Q86TN4 253 aaKnown RBP14.97□□□□□ -0.01
PNKP-211ENST00000598020 STHQ8IWL8 128 aa14.97□□□□□ -0.01
PNKP-211ENST00000598020 SAT2Q96F10 170 aaPredicted RBP14.97□□□□□ -0.01
PNKP-211ENST00000598020 C20orf173Q96LM9 149 aa14.97□□□□□ -0.01
PNKP-211ENST00000598020 ZNF331Q9NQX6 463 aaPredicted RBP14.97□□□□□ -0.01
PNKP-211ENST00000598020 RPRMQ9NS64 109 aa14.97□□□□□ -0.01
PNKP-211ENST00000598020 A0A1B0GVG6 124 aa14.96□□□□□ -0.01
PNKP-211ENST00000598020 KNCNA6PVL3 124 aa14.96□□□□□ -0.01
PNKP-211ENST00000598020 MBP02144 154 aa14.96□□□□□ -0.01
PNKP-211ENST00000598020 RPL35AP18077 110 aaKnown RBP14.96□□□□□ -0.01
PNKP-211ENST00000598020 ACTL10Q5JWF8 245 aa14.96□□□□□ -0.01
PNKP-211ENST00000598020 LRRC20Q8TCA0 184 aa14.96□□□□□ -0.01
PNKP-211ENST00000598020 SPATA25Q9BR10 227 aa14.96□□□□□ -0.01
PNKP-211ENST00000598020 SAV1Q9H4B6 383 aaPredicted RBP14.96□□□□□ -0.01
PNKP-211ENST00000598020 ZMAT4Q9H898 229 aa14.96□□□□□ -0.01
PNKP-211ENST00000598020 ZNF586Q9NXT0 402 aa14.96□□□□□ -0.01
PNKP-211ENST00000598020 CLEC5AQ9NY25 188 aa14.96□□□□□ -0.01
PNKP-211ENST00000598020 H3BMM0 161 aa14.95□□□□□ -0.02
PNKP-211ENST00000598020 HLA-DRB4P13762 266 aa14.95□□□□□ -0.02
PNKP-211ENST00000598020 PDE6HQ13956 83 aa14.95□□□□□ -0.02
PNKP-211ENST00000598020 CLUHP3Q96NS8 147 aa14.95□□□□□ -0.02
PNKP-211ENST00000598020 CSTL1Q9H114 145 aa14.95□□□□□ -0.02
PNKP-211ENST00000598020 SH3BGRL3Q9H299 93 aa14.95□□□□□ -0.02
PNKP-211ENST00000598020 OR51M1Q9H341 326 aa14.95□□□□□ -0.02
PNKP-211ENST00000598020 HLA-DRB4X5D2U9 266 aa14.95□□□□□ -0.02
PNKP-211ENST00000598020 TRBV19A0A075B6N1 114 aa14.94□□□□□ -0.02
PNKP-211ENST00000598020 BCL2L11O43521 198 aa14.94□□□□□ -0.02
PNKP-211ENST00000598020 PYYP10082 97 aa14.94□□□□□ -0.02
PNKP-211ENST00000598020 TAS2R45P59539 299 aa14.94□□□□□ -0.02
PNKP-211ENST00000598020 RAB2AP61019 212 aa14.94□□□□□ -0.02
PNKP-211ENST00000598020 PSG3Q16557 428 aa14.94□□□□□ -0.02
PNKP-211ENST00000598020 IGFL4Q6B9Z1 124 aa14.94□□□□□ -0.02
PNKP-211ENST00000598020 Q6ZWC4 215 aa14.94□□□□□ -0.02
PNKP-211ENST00000598020 OR10G4Q8NGN3 311 aa14.94□□□□□ -0.02
PNKP-211ENST00000598020 OR10G9Q8NGN4 311 aa14.94□□□□□ -0.02
PNKP-211ENST00000598020 OR10G7Q8NGN6 311 aa14.94□□□□□ -0.02
PNKP-211ENST00000598020 HYLS1Q96M11 299 aa14.94□□□□□ -0.02
PNKP-211ENST00000598020 A0A1W2PPV4 95 aa14.93□□□□□ -0.02
PNKP-211ENST00000598020 KANTRA0A1W2PQU2 76 aa14.93□□□□□ -0.02
PNKP-211ENST00000598020 SLC17A3O00476 420 aa14.93□□□□□ -0.02
PNKP-211ENST00000598020 SPP1P10451 314 aa14.93□□□□□ -0.02
PNKP-211ENST00000598020 KHDC3LQ587J8 217 aa14.93□□□□□ -0.02
PNKP-211ENST00000598020 MORN3Q6PF18 240 aaPredicted RBP14.93□□□□□ -0.02
PNKP-211ENST00000598020 TMUB2Q71RG4 321 aa14.93□□□□□ -0.02
PNKP-211ENST00000598020 RNF182Q8N6D2 247 aa14.93□□□□□ -0.02
PNKP-211ENST00000598020 PAXXQ9BUH6 204 aa14.93□□□□□ -0.02
PNKP-211ENST00000598020 COL7A1Q02388 2944 aa14.93□□□□□ -0.02
PNKP-211ENST00000598020 A0A0J9YX75 114 aa14.92□□□□□ -0.02
PNKP-211ENST00000598020 SNRPCP09234 159 aaKnown RBP14.92□□□□□ -0.02
PNKP-211ENST00000598020 GDF5OSQ5U4N7 250 aa14.92□□□□□ -0.02
PNKP-211ENST00000598020 EBLN2Q6P2I7 272 aa14.92□□□□□ -0.02
PNKP-211ENST00000598020 RPP25LQ8N5L8 163 aaKnown RBP14.92□□□□□ -0.02
PNKP-211ENST00000598020 RNF141Q8WVD5 230 aa14.92□□□□□ -0.02
PNKP-211ENST00000598020 FXYD5Q96DB9 178 aa14.92□□□□□ -0.02
PNKP-211ENST00000598020 ZNF503Q96F45 646 aa14.92□□□□□ -0.02
PNKP-211ENST00000598020 U3KQK5 164 aa14.92□□□□□ -0.02
PNKP-211ENST00000598020 A8MTW9 85 aa14.91□□□□□ -0.02
PNKP-211ENST00000598020 H3BTX0 84 aa14.91□□□□□ -0.02
PNKP-211ENST00000598020 NDUFB4O95168 129 aa14.91□□□□□ -0.02
PNKP-211ENST00000598020 NBEAP1P0C6P0 100 aa14.91□□□□□ -0.02
PNKP-211ENST00000598020 DEFB1P60022 68 aa14.91□□□□□ -0.02
PNKP-211ENST00000598020 PSG9Q00887 426 aa14.91□□□□□ -0.02
PNKP-211ENST00000598020 LGALSLQ3ZCW2 172 aaPredicted RBP14.91□□□□□ -0.02
PNKP-211ENST00000598020 TMEM41BQ5BJD5 291 aa14.91□□□□□ -0.02
PNKP-211ENST00000598020 FAM122CQ6P4D5 195 aa14.91□□□□□ -0.02
PNKP-211ENST00000598020 PQLC2Q6ZP29 291 aa14.91□□□□□ -0.02
PNKP-211ENST00000598020 TP53TG1Q9Y2A0 90 aa14.91□□□□□ -0.02
PNKP-211ENST00000598020 HUWE1Q7Z6Z7 4374 aaKnown RBP14.9□□□□□ -0.02
PNKP-211ENST00000598020 OR7C2O60412 319 aa14.9□□□□□ -0.02
PNKP-211ENST00000598020 HLA-DMBP28068 263 aa14.9□□□□□ -0.02
PNKP-211ENST00000598020 CDC34P49427 236 aaPredicted RBP14.9□□□□□ -0.02
PNKP-211ENST00000598020 EIF5AP63241 154 aaKnown RBP14.9□□□□□ -0.02
PNKP-211ENST00000598020 ZNF738Q8NE65 137 aa14.9□□□□□ -0.02
PNKP-211ENST00000598020 RCHY1Q96PM5 261 aa14.9□□□□□ -0.02
PNKP-211ENST00000598020 TENM3Q9P273 2699 aa14.9□□□□□ -0.02
PNKP-211ENST00000598020 NBEAL2Q6ZNJ1 2754 aa14.9□□□□□ -0.02
PNKP-211ENST00000598020 F6UB75 175 aa14.89□□□□□ -0.03
PNKP-211ENST00000598020 PFDN1O60925 122 aa14.89□□□□□ -0.03
PNKP-211ENST00000598020 GIG44P09565 113 aaPredicted RBP14.89□□□□□ -0.03
PNKP-211ENST00000598020 CD300CQ08708 224 aa14.89□□□□□ -0.03
PNKP-211ENST00000598020 RNF183Q96D59 192 aa14.89□□□□□ -0.03
PNKP-211ENST00000598020 MRPL53Q96EL3 112 aaKnown RBP14.89□□□□□ -0.03
PNKP-211ENST00000598020 OVOL2Q9BRP0 275 aa14.89□□□□□ -0.03
PNKP-211ENST00000598020 ZNF471Q9BX82 626 aaPredicted RBP14.89□□□□□ -0.03
PNKP-211ENST00000598020 STAB2Q8WWQ8 2551 aa14.88□□□□□ -0.03
PNKP-211ENST00000598020 DUSP14O95147 198 aaKnown RBP14.88□□□□□ -0.03
PNKP-211ENST00000598020 OR10J4P0C629 311 aa14.88□□□□□ -0.03
PNKP-211ENST00000598020 SEC11BP0C7V7 166 aa14.88□□□□□ -0.03
PNKP-211ENST00000598020 STAG3L2P0CL84 134 aa14.88□□□□□ -0.03
PNKP-211ENST00000598020 STAG3L3P0CL85 134 aa14.88□□□□□ -0.03
PNKP-211ENST00000598020 NUTF2P61970 127 aaKnown RBP14.88□□□□□ -0.03
PNKP-211ENST00000598020 BLNKQ8WV28 456 aa14.88□□□□□ -0.03
PNKP-211ENST00000598020 RAB24Q969Q5 203 aa14.88□□□□□ -0.03
PNKP-211ENST00000598020 RPUSD4Q96CM3 377 aaKnown RBP14.88□□□□□ -0.03
PNKP-211ENST00000598020 ACTR3CQ9C0K3 210 aaPredicted RBP14.88□□□□□ -0.03
PNKP-211ENST00000598020 PRELID1Q9Y255 219 aa14.88□□□□□ -0.03
PNKP-211ENST00000598020 CA1P00915 261 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms