RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 SEC11BP0C7V7 166 aa16.45■□□□□ 0.22
CHMP2A-204ENST00000597848 IGHV4-30-4P0DP06 118 aa16.45■□□□□ 0.22
CHMP2A-204ENST00000597848 PSMB3P49720 205 aa16.45■□□□□ 0.22
CHMP2A-204ENST00000597848 KHDC3LQ587J8 217 aa16.45■□□□□ 0.22
CHMP2A-204ENST00000597848 RPP25LQ8N5L8 163 aaKnown RBP16.45■□□□□ 0.22
CHMP2A-204ENST00000597848 STOML3Q8TAV4 291 aa16.45■□□□□ 0.22
CHMP2A-204ENST00000597848 PAXXQ9BUH6 204 aa16.45■□□□□ 0.22
CHMP2A-204ENST00000597848 ACTR3CQ9C0K3 210 aaPredicted RBP16.45■□□□□ 0.22
CHMP2A-204ENST00000597848 HRH4Q9H3N8 390 aa16.45■□□□□ 0.22
CHMP2A-204ENST00000597848 SRD5A3Q9H8P0 318 aa16.45■□□□□ 0.22
CHMP2A-204ENST00000597848 HMGB3O15347 200 aaKnown RBP16.44■□□□□ 0.22
CHMP2A-204ENST00000597848 IGLC2P0DOY2 106 aa16.44■□□□□ 0.22
CHMP2A-204ENST00000597848 HIST1H1EP10412 219 aaKnown RBP16.44■□□□□ 0.22
CHMP2A-204ENST00000597848 IGFL4Q6B9Z1 124 aa16.44■□□□□ 0.22
CHMP2A-204ENST00000597848 LCN15Q6UWW0 184 aa16.44■□□□□ 0.22
CHMP2A-204ENST00000597848 SLC51BQ86UW2 128 aa16.44■□□□□ 0.22
CHMP2A-204ENST00000597848 RAB24Q969Q5 203 aa16.44■□□□□ 0.22
CHMP2A-204ENST00000597848 OR10J4P0C629 311 aa16.43■□□□□ 0.22
CHMP2A-204ENST00000597848 ZNF124Q15973 351 aa16.43■□□□□ 0.22
CHMP2A-204ENST00000597848 GUK1Q16774 197 aa16.43■□□□□ 0.22
CHMP2A-204ENST00000597848 BLNKQ8WV28 456 aa16.43■□□□□ 0.22
CHMP2A-204ENST00000597848 ZNF586Q9NXT0 402 aa16.43■□□□□ 0.22
CHMP2A-204ENST00000597848 EIF5AL1Q6IS14 154 aaKnown RBP16.42■□□□□ 0.22
CHMP2A-204ENST00000597848 RNF141Q8WVD5 230 aa16.42■□□□□ 0.22
CHMP2A-204ENST00000597848 TMED6Q8WW62 240 aa16.42■□□□□ 0.22
CHMP2A-204ENST00000597848 FBN3Q75N90 2809 aa16.42■□□□□ 0.22
CHMP2A-204ENST00000597848 TRAV8-2A0A0B4J237 113 aa16.41■□□□□ 0.22
CHMP2A-204ENST00000597848 NBEAP1P0C6P0 100 aa16.41■□□□□ 0.22
CHMP2A-204ENST00000597848 UBE2L3P68036 154 aaKnown RBP16.41■□□□□ 0.22
CHMP2A-204ENST00000597848 RNF182Q8N6D2 247 aa16.41■□□□□ 0.22
CHMP2A-204ENST00000597848 CITED4Q96RK1 184 aa16.41■□□□□ 0.22
CHMP2A-204ENST00000597848 SLC50A1Q9BRV3 221 aa16.41■□□□□ 0.22
CHMP2A-204ENST00000597848 TRBV19A0A075B6N1 114 aa16.4■□□□□ 0.22
CHMP2A-204ENST00000597848 KNCNA6PVL3 124 aa16.4■□□□□ 0.22
CHMP2A-204ENST00000597848 UMAD1C9J7I0 102 aa16.4■□□□□ 0.22
CHMP2A-204ENST00000597848 SLC17A3O00476 420 aa16.4■□□□□ 0.22
CHMP2A-204ENST00000597848 PQLC2Q6ZP29 291 aa16.4■□□□□ 0.22
CHMP2A-204ENST00000597848 FXYD5Q96DB9 178 aa16.4■□□□□ 0.22
CHMP2A-204ENST00000597848 ZNF503Q96F45 646 aa16.4■□□□□ 0.22
CHMP2A-204ENST00000597848 C20orf173Q96LM9 149 aa16.4■□□□□ 0.22
CHMP2A-204ENST00000597848 ZNF331Q9NQX6 463 aaPredicted RBP16.4■□□□□ 0.22
CHMP2A-204ENST00000597848 PLA2G2EQ9NZK7 142 aa16.4■□□□□ 0.22
CHMP2A-204ENST00000597848 BOLA1Q9Y3E2 137 aa16.4■□□□□ 0.22
CHMP2A-204ENST00000597848 A8MZ25 164 aa16.39■□□□□ 0.21
CHMP2A-204ENST00000597848 FRMD6-AS1P0C7T7 363 aa16.39■□□□□ 0.21
CHMP2A-204ENST00000597848 STAG3L2P0CL84 134 aa16.39■□□□□ 0.21
CHMP2A-204ENST00000597848 STAG3L3P0CL85 134 aa16.39■□□□□ 0.21
CHMP2A-204ENST00000597848 SAT2Q96F10 170 aaPredicted RBP16.39■□□□□ 0.21
CHMP2A-204ENST00000597848 CTXND1A0A1B0GTU2 59 aa16.38■□□□□ 0.21
CHMP2A-204ENST00000597848 BOLA2-SMG1P6H3BVE0 249 aa16.38■□□□□ 0.21
CHMP2A-204ENST00000597848 ARL14EPLP0DKL9 152 aa16.38■□□□□ 0.21
CHMP2A-204ENST00000597848 HLA-DMBP28068 263 aa16.38■□□□□ 0.21
CHMP2A-204ENST00000597848 ACTL10Q5JWF8 245 aa16.38■□□□□ 0.21
CHMP2A-204ENST00000597848 SSX7Q7RTT5 188 aa16.38■□□□□ 0.21
CHMP2A-204ENST00000597848 ZNF738Q8NE65 137 aa16.38■□□□□ 0.21
CHMP2A-204ENST00000597848 DNAH3Q8TD57 4116 aa16.38■□□□□ 0.21
CHMP2A-204ENST00000597848 RBMY1BA6NDE4 496 aaKnown RBP16.37■□□□□ 0.21
CHMP2A-204ENST00000597848 RBMY1EA6NEQ0 496 aaKnown RBP16.37■□□□□ 0.21
CHMP2A-204ENST00000597848 RBMY1DP0C7P1 496 aaKnown RBP16.37■□□□□ 0.21
CHMP2A-204ENST00000597848 RPL35AP18077 110 aaKnown RBP16.37■□□□□ 0.21
CHMP2A-204ENST00000597848 DEFB1P60022 68 aa16.37■□□□□ 0.21
CHMP2A-204ENST00000597848 PSG9Q00887 426 aa16.37■□□□□ 0.21
CHMP2A-204ENST00000597848 PDE6HQ13956 83 aa16.37■□□□□ 0.21
CHMP2A-204ENST00000597848 ZNF726P1Q15940 193 aa16.37■□□□□ 0.21
CHMP2A-204ENST00000597848 PSG3Q16557 428 aa16.37■□□□□ 0.21
CHMP2A-204ENST00000597848 STHQ8IWL8 128 aa16.37■□□□□ 0.21
CHMP2A-204ENST00000597848 FAM213BQ8TBF2 198 aa16.37■□□□□ 0.21
CHMP2A-204ENST00000597848 MEGF8Q7Z7M0 2845 aa16.37■□□□□ 0.21
CHMP2A-204ENST00000597848 ZNF253O75346 499 aa16.36■□□□□ 0.21
CHMP2A-204ENST00000597848 NDUFB4O95168 129 aa16.36■□□□□ 0.21
CHMP2A-204ENST00000597848 CXorf1O96002 111 aa16.36■□□□□ 0.21
CHMP2A-204ENST00000597848 FHITP49789 147 aa16.36■□□□□ 0.21
CHMP2A-204ENST00000597848 EBLN2Q6P2I7 272 aa16.36■□□□□ 0.21
CHMP2A-204ENST00000597848 IQCF2Q8IXL9 164 aa16.36■□□□□ 0.21
CHMP2A-204ENST00000597848 CLEC5AQ9NY25 188 aa16.36■□□□□ 0.21
CHMP2A-204ENST00000597848 LOC102724200A0A096LPH7 203 aaPredicted RBP16.35■□□□□ 0.21
CHMP2A-204ENST00000597848 GCHFRP30047 84 aa16.35■□□□□ 0.21
CHMP2A-204ENST00000597848 AAMDCQ9H7C9 122 aa16.35■□□□□ 0.21
CHMP2A-204ENST00000597848 MAP1LC3B2A6NCE7 125 aa16.34■□□□□ 0.21
CHMP2A-204ENST00000597848 F6UB75 175 aa16.34■□□□□ 0.21
CHMP2A-204ENST00000597848 RANP62826 216 aaKnown RBP16.34■□□□□ 0.21
CHMP2A-204ENST00000597848 DPPA3Q6W0C5 159 aa16.34■□□□□ 0.21
CHMP2A-204ENST00000597848 FOXI2Q6ZQN5 318 aa16.34■□□□□ 0.21
CHMP2A-204ENST00000597848 EXOC3-AS1Q8N2X6 119 aa16.34■□□□□ 0.21
CHMP2A-204ENST00000597848 PHYHIPLQ96FC7 376 aa16.34■□□□□ 0.21
CHMP2A-204ENST00000597848 MAP1LC3BQ9GZQ8 125 aa16.34■□□□□ 0.21
CHMP2A-204ENST00000597848 ZNF705FA8MVS1 300 aaPredicted RBP16.33■□□□□ 0.2
CHMP2A-204ENST00000597848 PRB4P10163 310 aaPredicted RBP16.33■□□□□ 0.2
CHMP2A-204ENST00000597848 FGF8P55075 233 aaPredicted RBP16.33■□□□□ 0.2
CHMP2A-204ENST00000597848 RPUSD4Q96CM3 377 aaKnown RBP16.33■□□□□ 0.2
CHMP2A-204ENST00000597848 ASCL2Q99929 193 aa16.33■□□□□ 0.2
CHMP2A-204ENST00000597848 SAV1Q9H4B6 383 aaPredicted RBP16.33■□□□□ 0.2
CHMP2A-204ENST00000597848 RAB5CP51148 216 aa16.32■□□□□ 0.2
CHMP2A-204ENST00000597848 ICAM4Q14773 271 aa16.32■□□□□ 0.2
CHMP2A-204ENST00000597848 GDF5OSQ5U4N7 250 aa16.32■□□□□ 0.2
CHMP2A-204ENST00000597848 LINC00322Q6ZN03 302 aaPredicted RBP16.32■□□□□ 0.2
CHMP2A-204ENST00000597848 SFT2D1Q8WV19 159 aa16.32■□□□□ 0.2
CHMP2A-204ENST00000597848 TMEM167BQ9NRX6 74 aa16.32■□□□□ 0.2
CHMP2A-204ENST00000597848 H3BMM0 161 aa16.31■□□□□ 0.2
CHMP2A-204ENST00000597848 IGKV3-20P01619 116 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms