RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 DNASE2O00115 360 aaPredicted RBP7.79□□□□□ -1.16
LIG1-210ENST00000596332 GIG44P09565 113 aaPredicted RBP7.79□□□□□ -1.16
LIG1-210ENST00000596332 ZNF688P0C7X2 276 aa7.79□□□□□ -1.16
LIG1-210ENST00000596332 GALR1P47211 349 aa7.79□□□□□ -1.16
LIG1-210ENST00000596332 DEFB121Q5J5C9 76 aa7.79□□□□□ -1.16
LIG1-210ENST00000596332 GDF5OSQ5U4N7 250 aa7.79□□□□□ -1.16
LIG1-210ENST00000596332 GTSCR1Q86UQ5 136 aa7.79□□□□□ -1.16
LIG1-210ENST00000596332 BPIFA4PQ86YQ2 179 aa7.79□□□□□ -1.16
LIG1-210ENST00000596332 SBSPONQ8IVN8 264 aa7.79□□□□□ -1.16
LIG1-210ENST00000596332 OR10G4Q8NGN3 311 aa7.79□□□□□ -1.16
LIG1-210ENST00000596332 OR10G9Q8NGN4 311 aa7.79□□□□□ -1.16
LIG1-210ENST00000596332 OR10G7Q8NGN6 311 aa7.79□□□□□ -1.16
LIG1-210ENST00000596332 SUN5Q8TC36 379 aa7.79□□□□□ -1.16
LIG1-210ENST00000596332 GNPNAT1Q96EK6 184 aaPredicted RBP7.79□□□□□ -1.16
LIG1-210ENST00000596332 ZNF331Q9NQX6 463 aaPredicted RBP7.79□□□□□ -1.16
LIG1-210ENST00000596332 TENM3Q9P273 2699 aa7.79□□□□□ -1.16
LIG1-210ENST00000596332 HUWE1Q7Z6Z7 4374 aaKnown RBP7.78□□□□□ -1.16
LIG1-210ENST00000596332 TRBV19A0A075B6N1 114 aa7.78□□□□□ -1.16
LIG1-210ENST00000596332 BORCS7-ASMTA0A0B4J1R7 106 aa7.78□□□□□ -1.16
LIG1-210ENST00000596332 KNCNA6PVL3 124 aa7.78□□□□□ -1.16
LIG1-210ENST00000596332 ISLRO14498 428 aa7.78□□□□□ -1.16
LIG1-210ENST00000596332 PRB4P10163 310 aaPredicted RBP7.78□□□□□ -1.16
LIG1-210ENST00000596332 C4BPBP20851 252 aa7.78□□□□□ -1.16
LIG1-210ENST00000596332 PAFAH1B2P68402 229 aa7.78□□□□□ -1.16
LIG1-210ENST00000596332 RNF182Q8N6D2 247 aa7.78□□□□□ -1.16
LIG1-210ENST00000596332 STOML3Q8TAV4 291 aa7.78□□□□□ -1.16
LIG1-210ENST00000596332 MRPL32Q9BYC8 188 aaKnown RBP7.78□□□□□ -1.16
LIG1-210ENST00000596332 SRD5A3Q9H8P0 318 aa7.78□□□□□ -1.16
LIG1-210ENST00000596332 KCNIP2Q9NS61 270 aa7.78□□□□□ -1.16
LIG1-210ENST00000596332 TGP01266 2768 aa7.78□□□□□ -1.16
LIG1-210ENST00000596332 NBEAL2Q6ZNJ1 2754 aa7.78□□□□□ -1.16
LIG1-210ENST00000596332 A8MTW9 85 aa7.77□□□□□ -1.17
LIG1-210ENST00000596332 F6UB75 175 aa7.77□□□□□ -1.17
LIG1-210ENST00000596332 HMGB3O15347 200 aaKnown RBP7.77□□□□□ -1.17
LIG1-210ENST00000596332 SEC11BP0C7V7 166 aa7.77□□□□□ -1.17
LIG1-210ENST00000596332 STAG3L2P0CL84 134 aa7.77□□□□□ -1.17
LIG1-210ENST00000596332 STAG3L3P0CL85 134 aa7.77□□□□□ -1.17
LIG1-210ENST00000596332 HIST1H1EP10412 219 aaKnown RBP7.77□□□□□ -1.17
LIG1-210ENST00000596332 PSMB3P49720 205 aa7.77□□□□□ -1.17
LIG1-210ENST00000596332 FHITP49789 147 aa7.77□□□□□ -1.17
LIG1-210ENST00000596332 HAGHQ16775 308 aa7.77□□□□□ -1.17
LIG1-210ENST00000596332 ACOT6Q3I5F7 207 aaPredicted RBP7.77□□□□□ -1.17
LIG1-210ENST00000596332 PSMG4Q5JS54 123 aa7.77□□□□□ -1.17
LIG1-210ENST00000596332 FAM122CQ6P4D5 195 aa7.77□□□□□ -1.17
LIG1-210ENST00000596332 BAP18Q8IXM2 172 aa7.77□□□□□ -1.17
LIG1-210ENST00000596332 RAB24Q969Q5 203 aa7.77□□□□□ -1.17
LIG1-210ENST00000596332 B9D2Q9BPU9 175 aa7.77□□□□□ -1.17
LIG1-210ENST00000596332 ZNF471Q9BX82 626 aaPredicted RBP7.77□□□□□ -1.17
LIG1-210ENST00000596332 OR51M1Q9H341 326 aa7.77□□□□□ -1.17
LIG1-210ENST00000596332 A0A0J9YX75 114 aa7.76□□□□□ -1.17
LIG1-210ENST00000596332 ZNF705FA8MVS1 300 aaPredicted RBP7.76□□□□□ -1.17
LIG1-210ENST00000596332 PRAC2D3DTV9 90 aa7.76□□□□□ -1.17
LIG1-210ENST00000596332 H3BMM0 161 aa7.76□□□□□ -1.17
LIG1-210ENST00000596332 OR10J4P0C629 311 aa7.76□□□□□ -1.17
LIG1-210ENST00000596332 NBEAP1P0C6P0 100 aa7.76□□□□□ -1.17
LIG1-210ENST00000596332 MEOX2P50222 304 aa7.76□□□□□ -1.17
LIG1-210ENST00000596332 CMC4P56277 68 aaPredicted RBP7.76□□□□□ -1.17
LIG1-210ENST00000596332 RHOBP62745 196 aa7.76□□□□□ -1.17
LIG1-210ENST00000596332 PSG3Q16557 428 aa7.76□□□□□ -1.17
LIG1-210ENST00000596332 TMEM41BQ5BJD5 291 aa7.76□□□□□ -1.17
LIG1-210ENST00000596332 AMTNQ6UX39 209 aa7.76□□□□□ -1.17
LIG1-210ENST00000596332 TRPT1Q86TN4 253 aaKnown RBP7.76□□□□□ -1.17
LIG1-210ENST00000596332 RNF141Q8WVD5 230 aa7.76□□□□□ -1.17
LIG1-210ENST00000596332 AGRNO00468 2067 aa7.75□□□□□ -1.17
LIG1-210ENST00000596332 KANTRA0A1W2PQU2 76 aa7.75□□□□□ -1.17
LIG1-210ENST00000596332 ZNF253O75346 499 aa7.75□□□□□ -1.17
LIG1-210ENST00000596332 ATF4P18848 351 aaPredicted RBP7.75□□□□□ -1.17
LIG1-210ENST00000596332 S100A7P31151 101 aa7.75□□□□□ -1.17
LIG1-210ENST00000596332 LCN15Q6UWW0 184 aa7.75□□□□□ -1.17
LIG1-210ENST00000596332 S100A7AQ86SG5 101 aa7.75□□□□□ -1.17
LIG1-210ENST00000596332 PHYHIPLQ96FC7 376 aa7.75□□□□□ -1.17
LIG1-210ENST00000596332 C16orf92Q96LL3 132 aa7.75□□□□□ -1.17
LIG1-210ENST00000596332 ASCL2Q99929 193 aa7.75□□□□□ -1.17
LIG1-210ENST00000596332 TM2D3Q9BRN9 247 aa7.75□□□□□ -1.17
LIG1-210ENST00000596332 PAXXQ9BUH6 204 aa7.75□□□□□ -1.17
LIG1-210ENST00000596332 SAV1Q9H4B6 383 aaPredicted RBP7.75□□□□□ -1.17
LIG1-210ENST00000596332 M0R3E3 92 aa7.74□□□□□ -1.17
LIG1-210ENST00000596332 MBP02144 154 aa7.74□□□□□ -1.17
LIG1-210ENST00000596332 ZNF705DP0CH99 300 aaPredicted RBP7.74□□□□□ -1.17
LIG1-210ENST00000596332 ZNF705BP0CI00 300 aaPredicted RBP7.74□□□□□ -1.17
LIG1-210ENST00000596332 HLA-DRB4P13762 266 aa7.74□□□□□ -1.17
LIG1-210ENST00000596332 CDC34P49427 236 aaPredicted RBP7.74□□□□□ -1.17
LIG1-210ENST00000596332 GUK1Q16774 197 aa7.74□□□□□ -1.17
LIG1-210ENST00000596332 EXOC3-AS1Q8N2X6 119 aa7.74□□□□□ -1.17
LIG1-210ENST00000596332 CSNK1G2-AS1Q8NCQ2 148 aa7.74□□□□□ -1.17
LIG1-210ENST00000596332 TMED6Q8WW62 240 aa7.74□□□□□ -1.17
LIG1-210ENST00000596332 MBD3L1Q8WWY6 194 aa7.74□□□□□ -1.17
LIG1-210ENST00000596332 LINC00052Q96N35 136 aa7.74□□□□□ -1.17
LIG1-210ENST00000596332 CLUHP3Q96NS8 147 aa7.74□□□□□ -1.17
LIG1-210ENST00000596332 TMPRSS5Q9H3S3 457 aa7.74□□□□□ -1.17
LIG1-210ENST00000596332 RNF24Q9Y225 148 aa7.74□□□□□ -1.17
LIG1-210ENST00000596332 HLA-DRB4X5D2U9 266 aa7.74□□□□□ -1.17
LIG1-210ENST00000596332 ARL14EPLP0DKL9 152 aa7.73□□□□□ -1.17
LIG1-210ENST00000596332 TPT1P13693 172 aaKnown RBP7.73□□□□□ -1.17
LIG1-210ENST00000596332 RPL35AP18077 110 aaKnown RBP7.73□□□□□ -1.17
LIG1-210ENST00000596332 ID1P41134 155 aa7.73□□□□□ -1.17
LIG1-210ENST00000596332 SNRPD3P62318 126 aaKnown RBP7.73□□□□□ -1.17
LIG1-210ENST00000596332 PDE6HQ13956 83 aa7.73□□□□□ -1.17
LIG1-210ENST00000596332 ACTL10Q5JWF8 245 aa7.73□□□□□ -1.17
LIG1-210ENST00000596332 FOXI2Q6ZQN5 318 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms