RNA–Protein interactions for RNA: ENST00000594116.1

LTBP4-209, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-209ENST00000594116 KHDC3LQ587J8 217 aa12.68□□□□□ -0.38
LTBP4-209ENST00000594116 SSX7Q7RTT5 188 aa12.68□□□□□ -0.38
LTBP4-209ENST00000594116 RAB24Q969Q5 203 aa12.68□□□□□ -0.38
LTBP4-209ENST00000594116 C17orf77Q96MU5 243 aa12.68□□□□□ -0.38
LTBP4-209ENST00000594116 SPATA25Q9BR10 227 aa12.68□□□□□ -0.38
LTBP4-209ENST00000594116 RYR2Q92736 4967 aa12.68□□□□□ -0.38
LTBP4-209ENST00000594116 TRAV2A0A0B4J234 112 aa12.67□□□□□ -0.38
LTBP4-209ENST00000594116 IGLC2P0DOY2 106 aa12.67□□□□□ -0.38
LTBP4-209ENST00000594116 HAGHQ16775 308 aa12.67□□□□□ -0.38
LTBP4-209ENST00000594116 ALKAL2Q6UX46 152 aa12.67□□□□□ -0.38
LTBP4-209ENST00000594116 RBPMS2Q6ZRY4 209 aaKnown RBP12.67□□□□□ -0.38
LTBP4-209ENST00000594116 STXBP6Q8NFX7 210 aa12.67□□□□□ -0.38
LTBP4-209ENST00000594116 ZNF503Q96F45 646 aa12.67□□□□□ -0.38
LTBP4-209ENST00000594116 SPAG8Q99932 426 aaPredicted RBP12.67□□□□□ -0.38
LTBP4-209ENST00000594116 ZNF785A8K8V0 405 aa12.66□□□□□ -0.38
LTBP4-209ENST00000594116 EIF3GO75821 320 aaKnown RBP eCLIP12.66□□□□□ -0.38
LTBP4-209ENST00000594116 FHITP49789 147 aa12.66□□□□□ -0.38
LTBP4-209ENST00000594116 PQLC2Q6ZP29 291 aa12.66□□□□□ -0.38
LTBP4-209ENST00000594116 MS4A6AQ9H2W1 248 aa12.66□□□□□ -0.38
LTBP4-209ENST00000594116 OR51M1Q9H341 326 aa12.66□□□□□ -0.38
LTBP4-209ENST00000594116 NRN1Q9NPD7 142 aa12.66□□□□□ -0.38
LTBP4-209ENST00000594116 PYYP10082 97 aa12.65□□□□□ -0.38
LTBP4-209ENST00000594116 ATF4P18848 351 aaPredicted RBP12.65□□□□□ -0.38
LTBP4-209ENST00000594116 RPL11P62913 178 aaKnown RBP12.65□□□□□ -0.38
LTBP4-209ENST00000594116 FAM74A1Q5RGS3 127 aa12.65□□□□□ -0.38
LTBP4-209ENST00000594116 TEX261Q6UWH6 196 aa12.65□□□□□ -0.38
LTBP4-209ENST00000594116 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.65□□□□□ -0.38
LTBP4-209ENST00000594116 FAM213BQ8TBF2 198 aa12.65□□□□□ -0.38
LTBP4-209ENST00000594116 DCANP1Q8TF63 244 aa12.65□□□□□ -0.38
LTBP4-209ENST00000594116 PAXXQ9BUH6 204 aa12.65□□□□□ -0.38
LTBP4-209ENST00000594116 HRH4Q9H3N8 390 aa12.65□□□□□ -0.38
LTBP4-209ENST00000594116 TUBA4BQ9H853 241 aa12.65□□□□□ -0.38
LTBP4-209ENST00000594116 LCE6AA0A183 80 aa12.64□□□□□ -0.39
LTBP4-209ENST00000594116 H3BQ15 152 aa12.64□□□□□ -0.39
LTBP4-209ENST00000594116 K7EQG2 157 aa12.64□□□□□ -0.39
LTBP4-209ENST00000594116 SOCS3O14543 225 aa12.64□□□□□ -0.39
LTBP4-209ENST00000594116 HMGB3O15347 200 aaKnown RBP12.64□□□□□ -0.39
LTBP4-209ENST00000594116 OR7C2O60412 319 aa12.64□□□□□ -0.39
LTBP4-209ENST00000594116 HIST1H1EP10412 219 aaKnown RBP12.64□□□□□ -0.39
LTBP4-209ENST00000594116 MEOX2P50222 304 aa12.64□□□□□ -0.39
LTBP4-209ENST00000594116 PAFAH1B2P68402 229 aa12.64□□□□□ -0.39
LTBP4-209ENST00000594116 MBD3L1Q8WWY6 194 aa12.64□□□□□ -0.39
LTBP4-209ENST00000594116 FXYD5Q96DB9 178 aa12.64□□□□□ -0.39
LTBP4-209ENST00000594116 ZNF586Q9NXT0 402 aa12.64□□□□□ -0.39
LTBP4-209ENST00000594116 STARD9Q9P2P6 4700 aa12.64□□□□□ -0.39
LTBP4-209ENST00000594116 LYSTQ99698 3801 aa12.63□□□□□ -0.39
LTBP4-209ENST00000594116 SACSQ9NZJ4 4579 aa12.63□□□□□ -0.39
LTBP4-209ENST00000594116 IGKV3-7A0A075B6H7 116 aa12.63□□□□□ -0.39
LTBP4-209ENST00000594116 MAP1LC3B2A6NCE7 125 aa12.63□□□□□ -0.39
LTBP4-209ENST00000594116 CXorf1O96002 111 aa12.63□□□□□ -0.39
LTBP4-209ENST00000594116 ARL14EPLP0DKL9 152 aa12.63□□□□□ -0.39
LTBP4-209ENST00000594116 GUK1Q16774 197 aa12.63□□□□□ -0.39
LTBP4-209ENST00000594116 ZFAND6Q6FIF0 208 aa12.63□□□□□ -0.39
LTBP4-209ENST00000594116 LINC00322Q6ZN03 302 aaPredicted RBP12.63□□□□□ -0.39
LTBP4-209ENST00000594116 GBGT1Q8N5D6 347 aa12.63□□□□□ -0.39
LTBP4-209ENST00000594116 SUN5Q8TC36 379 aa12.63□□□□□ -0.39
LTBP4-209ENST00000594116 RNF141Q8WVD5 230 aa12.63□□□□□ -0.39
LTBP4-209ENST00000594116 MAP1LC3BQ9GZQ8 125 aa12.63□□□□□ -0.39
LTBP4-209ENST00000594116 OR4C46A6NHA9 309 aa12.62□□□□□ -0.39
LTBP4-209ENST00000594116 ZNF253O75346 499 aa12.62□□□□□ -0.39
LTBP4-209ENST00000594116 OR10J4P0C629 311 aa12.62□□□□□ -0.39
LTBP4-209ENST00000594116 CD81P60033 236 aa12.62□□□□□ -0.39
LTBP4-209ENST00000594116 UBE2L3P68036 154 aaKnown RBP12.62□□□□□ -0.39
LTBP4-209ENST00000594116 GUCA2BQ16661 112 aa12.62□□□□□ -0.39
LTBP4-209ENST00000594116 SAMD13Q5VXD3 122 aa12.62□□□□□ -0.39
LTBP4-209ENST00000594116 LCN15Q6UWW0 184 aa12.62□□□□□ -0.39
LTBP4-209ENST00000594116 ZNF680Q8NEM1 530 aa12.62□□□□□ -0.39
LTBP4-209ENST00000594116 SAT2Q96F10 170 aaPredicted RBP12.62□□□□□ -0.39
LTBP4-209ENST00000594116 TRBV19A0A075B6N1 114 aa12.61□□□□□ -0.39
LTBP4-209ENST00000594116 DNASE2O00115 360 aaPredicted RBP12.61□□□□□ -0.39
LTBP4-209ENST00000594116 GCHFRP30047 84 aa12.61□□□□□ -0.39
LTBP4-209ENST00000594116 TFPI2P48307 235 aa12.61□□□□□ -0.39
LTBP4-209ENST00000594116 PDE6HQ13956 83 aa12.61□□□□□ -0.39
LTBP4-209ENST00000594116 TRAV1-1A0A0B4J248 108 aa12.6□□□□□ -0.39
LTBP4-209ENST00000594116 ZNF705EA8MWA4 302 aaPredicted RBP12.6□□□□□ -0.39
LTBP4-209ENST00000594116 SLC17A3O00476 420 aa12.6□□□□□ -0.39
LTBP4-209ENST00000594116 ISLRO14498 428 aa12.6□□□□□ -0.39
LTBP4-209ENST00000594116 NDUFB4O95168 129 aa12.6□□□□□ -0.39
LTBP4-209ENST00000594116 IFNA7P01567 189 aa12.6□□□□□ -0.39
LTBP4-209ENST00000594116 H2AFB1P0C5Y9 115 aa12.6□□□□□ -0.39
LTBP4-209ENST00000594116 NBEAP1P0C6P0 100 aa12.6□□□□□ -0.39
LTBP4-209ENST00000594116 PSMB3P49720 205 aa12.6□□□□□ -0.39
LTBP4-209ENST00000594116 FGF8P55075 233 aaPredicted RBP12.6□□□□□ -0.39
LTBP4-209ENST00000594116 WFDC3Q8IUB2 231 aa12.6□□□□□ -0.39
LTBP4-209ENST00000594116 FAM24BQ8N5W8 94 aa12.6□□□□□ -0.39
LTBP4-209ENST00000594116 SLC50A1Q9BRV3 221 aa12.6□□□□□ -0.39
LTBP4-209ENST00000594116 ZNF331Q9NQX6 463 aaPredicted RBP12.6□□□□□ -0.39
LTBP4-209ENST00000594116 TRAV8-2A0A0B4J237 113 aa12.59□□□□□ -0.39
LTBP4-209ENST00000594116 H3BTX0 84 aa12.59□□□□□ -0.39
LTBP4-209ENST00000594116 SNRPCP09234 159 aaKnown RBP12.59□□□□□ -0.39
LTBP4-209ENST00000594116 CD7P09564 240 aa12.59□□□□□ -0.39
LTBP4-209ENST00000594116 IFITM2Q01629 132 aa12.59□□□□□ -0.39
LTBP4-209ENST00000594116 LRRC20Q8TCA0 184 aa12.59□□□□□ -0.39
LTBP4-209ENST00000594116 SFT2D1Q8WV19 159 aa12.59□□□□□ -0.39
LTBP4-209ENST00000594116 FAM110AQ9BQ89 295 aa12.59□□□□□ -0.39
LTBP4-209ENST00000594116 TMEM167BQ9NRX6 74 aa12.59□□□□□ -0.39
LTBP4-209ENST00000594116 BLOC1S1P78537 153 aa12.58□□□□□ -0.4
LTBP4-209ENST00000594116 ODF3L2Q3SX64 289 aa12.58□□□□□ -0.4
LTBP4-209ENST00000594116 BLNKQ8WV28 456 aa12.58□□□□□ -0.4
LTBP4-209ENST00000594116 C16orf92Q96LL3 132 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms