RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 PMCHL2Q9BQD1 86 aa13.03□□□□□ -0.32
LIG1-206ENST00000594067 CSN3P07498 182 aa13.02□□□□□ -0.32
LIG1-206ENST00000594067 RPS20P60866 119 aaKnown RBP13.02□□□□□ -0.32
LIG1-206ENST00000594067 AMMECR1LQ6DCA0 310 aa13.02□□□□□ -0.32
LIG1-206ENST00000594067 C16orf54Q6UWD8 224 aa13.02□□□□□ -0.32
LIG1-206ENST00000594067 SCNM1Q9BWG6 230 aa13.02□□□□□ -0.32
LIG1-206ENST00000594067 TRBV19A0A075B6N1 114 aa13.02□□□□□ -0.33
LIG1-206ENST00000594067 A0A087X0K7 114 aa13.02□□□□□ -0.33
LIG1-206ENST00000594067 CBY3A6NI87 242 aa13.02□□□□□ -0.33
LIG1-206ENST00000594067 LY6LH3BQJ8 138 aa13.02□□□□□ -0.33
LIG1-206ENST00000594067 HOXB4P17483 251 aaPredicted RBP13.02□□□□□ -0.33
LIG1-206ENST00000594067 KLF17Q5JT82 389 aaPredicted RBP13.02□□□□□ -0.33
LIG1-206ENST00000594067 LINC01545Q5VT33 79 aa13.02□□□□□ -0.33
LIG1-206ENST00000594067 BPIFA4PQ86YQ2 179 aa13.02□□□□□ -0.33
LIG1-206ENST00000594067 SHANK2-AS3Q9BTD1 123 aa13.02□□□□□ -0.33
LIG1-206ENST00000594067 HSPB8Q9UJY1 196 aa13.02□□□□□ -0.33
LIG1-206ENST00000594067 HILPDAQ9Y5L2 63 aa13.02□□□□□ -0.33
LIG1-206ENST00000594067 ARL6IP6Q8N6S5 226 aa13.01□□□□□ -0.33
LIG1-206ENST00000594067 CST9LQ9H4G1 147 aa13.01□□□□□ -0.33
LIG1-206ENST00000594067 RNF24Q9Y225 148 aa13.01□□□□□ -0.33
LIG1-206ENST00000594067 CD5LO43866 347 aa13.01□□□□□ -0.33
LIG1-206ENST00000594067 LY6HO94772 140 aa13.01□□□□□ -0.33
LIG1-206ENST00000594067 FOXE3Q13461 319 aa13.01□□□□□ -0.33
LIG1-206ENST00000594067 TIMM8BQ9Y5J9 83 aaPredicted RBP13.01□□□□□ -0.33
LIG1-206ENST00000594067 H3BRN7 92 aa13□□□□□ -0.33
LIG1-206ENST00000594067 PPBPP02775 128 aa13□□□□□ -0.33
LIG1-206ENST00000594067 IL4P05112 153 aa13□□□□□ -0.33
LIG1-206ENST00000594067 ARMS2P0C7Q2 107 aa13□□□□□ -0.33
LIG1-206ENST00000594067 HTR1DP28221 377 aa13□□□□□ -0.33
LIG1-206ENST00000594067 HIST1H1AQ02539 215 aaPredicted RBP13□□□□□ -0.33
LIG1-206ENST00000594067 GRNP28799 593 aaKnown RBP13□□□□□ -0.33
LIG1-206ENST00000594067 COTL1Q14019 142 aa13□□□□□ -0.33
LIG1-206ENST00000594067 SIGLEC15Q6ZMC9 328 aa13□□□□□ -0.33
LIG1-206ENST00000594067 BCL6BQ8N143 479 aaPredicted RBP13□□□□□ -0.33
LIG1-206ENST00000594067 ZNF491Q8N8L2 437 aa13□□□□□ -0.33
LIG1-206ENST00000594067 PSG8Q9UQ74 426 aa13□□□□□ -0.33
LIG1-206ENST00000594067 FAM90A27PA6NNH2 459 aa12.99□□□□□ -0.33
LIG1-206ENST00000594067 FCGR2BP31994 310 aaPredicted RBP12.99□□□□□ -0.33
LIG1-206ENST00000594067 ARF6P62330 175 aa12.99□□□□□ -0.33
LIG1-206ENST00000594067 ZNF672Q499Z4 452 aaPredicted RBP12.99□□□□□ -0.33
LIG1-206ENST00000594067 RNF125Q96EQ8 232 aa12.99□□□□□ -0.33
LIG1-206ENST00000594067 RNF5Q99942 180 aa12.99□□□□□ -0.33
LIG1-206ENST00000594067 A0A1B0GUT8 65 aa12.99□□□□□ -0.33
LIG1-206ENST00000594067 A0A1W2PRD5 423 aa12.99□□□□□ -0.33
LIG1-206ENST00000594067 A0A1W2PRF3 423 aa12.99□□□□□ -0.33
LIG1-206ENST00000594067 A0A1W2PRM7 423 aa12.99□□□□□ -0.33
LIG1-206ENST00000594067 M0R3E3 92 aa12.99□□□□□ -0.33
LIG1-206ENST00000594067 PSG9Q00887 426 aa12.99□□□□□ -0.33
LIG1-206ENST00000594067 OCIAD2Q56VL3 154 aa12.99□□□□□ -0.33
LIG1-206ENST00000594067 ZNF747Q9BV97 191 aa12.99□□□□□ -0.33
LIG1-206ENST00000594067 GPR183P32249 361 aa12.98□□□□□ -0.33
LIG1-206ENST00000594067 C2orf91Q6ZV80 131 aa12.98□□□□□ -0.33
LIG1-206ENST00000594067 TMEM75Q8N9X5 138 aa12.98□□□□□ -0.33
LIG1-206ENST00000594067 TPPP3Q9BW30 176 aa12.98□□□□□ -0.33
LIG1-206ENST00000594067 AP5S1Q9NUS5 200 aa12.98□□□□□ -0.33
LIG1-206ENST00000594067 TRAV8-6A0A0B4J262 113 aa12.98□□□□□ -0.33
LIG1-206ENST00000594067 NBR2O15453 112 aa12.98□□□□□ -0.33
LIG1-206ENST00000594067 COX8AP10176 69 aa12.98□□□□□ -0.33
LIG1-206ENST00000594067 CRIP1P50238 77 aa12.98□□□□□ -0.33
LIG1-206ENST00000594067 KLRD1Q13241 179 aa12.98□□□□□ -0.33
LIG1-206ENST00000594067 TRBV6-1A0A0K0K1D8 114 aa12.97□□□□□ -0.33
LIG1-206ENST00000594067 VKORC1Q9BQB6 163 aa12.97□□□□□ -0.33
LIG1-206ENST00000594067 SRSF8Q9BRL6 282 aaKnown RBP12.97□□□□□ -0.33
LIG1-206ENST00000594067 NCR2O95944 276 aa12.97□□□□□ -0.33
LIG1-206ENST00000594067 PSG3Q16557 428 aa12.97□□□□□ -0.33
LIG1-206ENST00000594067 ZNF414Q96IQ9 312 aa12.97□□□□□ -0.33
LIG1-206ENST00000594067 K7EQM0 130 aa12.96□□□□□ -0.33
LIG1-206ENST00000594067 MRPS12O15235 138 aaKnown RBP12.96□□□□□ -0.33
LIG1-206ENST00000594067 HES1Q14469 280 aa12.96□□□□□ -0.33
LIG1-206ENST00000594067 C8orf49Q96NF6 230 aa12.96□□□□□ -0.33
LIG1-206ENST00000594067 DPM3Q9P2X0 92 aa12.96□□□□□ -0.33
LIG1-206ENST00000594067 SNAI2O43623 268 aa12.96□□□□□ -0.33
LIG1-206ENST00000594067 RIGQ13278 110 aa12.96□□□□□ -0.33
LIG1-206ENST00000594067 GATD1Q8NB37 220 aa12.96□□□□□ -0.33
LIG1-206ENST00000594067 CFHR4Q92496 578 aa12.96□□□□□ -0.33
LIG1-206ENST00000594067 ARHGAP32A7KAX9 2087 aa12.96□□□□□ -0.33
LIG1-206ENST00000594067 LRBAP50851 2863 aa12.96□□□□□ -0.33
LIG1-206ENST00000594067 GNG7O60262 68 aa12.96□□□□□ -0.34
LIG1-206ENST00000594067 LY6G5BQ8NDX9 201 aa12.96□□□□□ -0.34
LIG1-206ENST00000594067 CSMD1Q96PZ7 3565 aa12.95□□□□□ -0.34
LIG1-206ENST00000594067 DCHS2Q6V1P9 2916 aa12.95□□□□□ -0.34
LIG1-206ENST00000594067 WI2-2373I1.2A0A1W2PRP0 233 aa12.95□□□□□ -0.34
LIG1-206ENST00000594067 GAGE12BA1L429 117 aa12.95□□□□□ -0.34
LIG1-206ENST00000594067 PEF1Q9UBV8 284 aaKnown RBP12.95□□□□□ -0.34
LIG1-206ENST00000594067 TMSB15BA0A087X1C1 80 aa12.94□□□□□ -0.34
LIG1-206ENST00000594067 FAM106CPP0CH98 169 aa12.94□□□□□ -0.34
LIG1-206ENST00000594067 CSN1S1P47710 185 aa12.94□□□□□ -0.34
LIG1-206ENST00000594067 FAM106AQ4KMX7 169 aa12.94□□□□□ -0.34
LIG1-206ENST00000594067 LYPD1Q8N2G4 141 aa12.94□□□□□ -0.34
LIG1-206ENST00000594067 OR10AG1Q8NH19 301 aa12.94□□□□□ -0.34
LIG1-206ENST00000594067 PRSS3P2Q8NHM4 247 aa12.94□□□□□ -0.34
LIG1-206ENST00000594067 VPS25Q9BRG1 176 aa12.94□□□□□ -0.34
LIG1-206ENST00000594067 A0A096LNJ9 63 aa12.94□□□□□ -0.34
LIG1-206ENST00000594067 IGHV3-23P01764 117 aa12.94□□□□□ -0.34
LIG1-206ENST00000594067 PIP4P2Q8N4L2 257 aa12.94□□□□□ -0.34
LIG1-206ENST00000594067 RELNP78509 3460 aa12.93□□□□□ -0.34
LIG1-206ENST00000594067 ABCA4P78363 2273 aa12.93□□□□□ -0.34
LIG1-206ENST00000594067 C7orf71A4D174 169 aa12.93□□□□□ -0.34
LIG1-206ENST00000594067 FA2HQ7L5A8 372 aa12.93□□□□□ -0.34
LIG1-206ENST00000594067 FANCD2OSQ96PS1 177 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms