RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 Q6ZRG5 221 aa11.8□□□□□ -0.52
CIRBP-241ENST00000593048 NPIPB3Q92617 1050 aa11.8□□□□□ -0.52
CIRBP-241ENST00000593048 ACY3Q96HD9 319 aa11.8□□□□□ -0.52
CIRBP-241ENST00000593048 KNCNA6PVL3 124 aa11.79□□□□□ -0.52
CIRBP-241ENST00000593048 RD3LP0DJH9 198 aa11.79□□□□□ -0.52
CIRBP-241ENST00000593048 TAGLN2P37802 199 aaKnown RBP11.79□□□□□ -0.52
CIRBP-241ENST00000593048 TMEM41BQ5BJD5 291 aa11.79□□□□□ -0.52
CIRBP-241ENST00000593048 ACTL10Q5JWF8 245 aa11.79□□□□□ -0.52
CIRBP-241ENST00000593048 MORN3Q6PF18 240 aaPredicted RBP11.79□□□□□ -0.52
CIRBP-241ENST00000593048 C16orf54Q6UWD8 224 aa11.79□□□□□ -0.52
CIRBP-241ENST00000593048 DCANP1Q8TF63 244 aa11.79□□□□□ -0.52
CIRBP-241ENST00000593048 MBD3L1Q8WWY6 194 aa11.79□□□□□ -0.52
CIRBP-241ENST00000593048 PBDC1Q9BVG4 233 aa11.79□□□□□ -0.52
CIRBP-241ENST00000593048 SH3BGRL3Q9H299 93 aa11.79□□□□□ -0.52
CIRBP-241ENST00000593048 FRAS1Q86XX4 4008 aa11.78□□□□□ -0.52
CIRBP-241ENST00000593048 UBE2L5PA0A1B0GUS4 154 aa11.78□□□□□ -0.52
CIRBP-241ENST00000593048 H2AFB1P0C5Y9 115 aa11.78□□□□□ -0.52
CIRBP-241ENST00000593048 FGF7P21781 194 aa11.78□□□□□ -0.52
CIRBP-241ENST00000593048 PSMG4Q5JS54 123 aa11.78□□□□□ -0.52
CIRBP-241ENST00000593048 TEPPQ6URK8 271 aa11.78□□□□□ -0.52
CIRBP-241ENST00000593048 TMEM182Q6ZP80 229 aaPredicted RBP11.78□□□□□ -0.52
CIRBP-241ENST00000593048 TMEM144Q7Z5S9 345 aa11.78□□□□□ -0.52
CIRBP-241ENST00000593048 TRPT1Q86TN4 253 aaKnown RBP11.78□□□□□ -0.52
CIRBP-241ENST00000593048 TMEM170AQ8WVE7 144 aa11.78□□□□□ -0.52
CIRBP-241ENST00000593048 NPCDR1Q9BY65 106 aa11.78□□□□□ -0.52
CIRBP-241ENST00000593048 U3KQE9 123 aa11.78□□□□□ -0.52
CIRBP-241ENST00000593048 TOMM40O96008 361 aa11.77□□□□□ -0.53
CIRBP-241ENST00000593048 SNRPD3P62318 126 aaKnown RBP11.77□□□□□ -0.53
CIRBP-241ENST00000593048 USF2Q15853 346 aaPredicted RBP11.77□□□□□ -0.53
CIRBP-241ENST00000593048 ACOT6Q3I5F7 207 aaPredicted RBP11.77□□□□□ -0.53
CIRBP-241ENST00000593048 GLMPQ8WWB7 406 aa11.77□□□□□ -0.53
CIRBP-241ENST00000593048 PLA2G2EQ9NZK7 142 aa11.77□□□□□ -0.53
CIRBP-241ENST00000593048 RPL29P47914 159 aaKnown RBP11.76□□□□□ -0.53
CIRBP-241ENST00000593048 PEA15Q15121 130 aa11.76□□□□□ -0.53
CIRBP-241ENST00000593048 LGALS9CQ6DKI2 356 aa11.76□□□□□ -0.53
CIRBP-241ENST00000593048 FAM213BQ8TBF2 198 aa11.76□□□□□ -0.53
CIRBP-241ENST00000593048 C2CD4CQ8TF44 421 aa11.76□□□□□ -0.53
CIRBP-241ENST00000593048 PCNPQ8WW12 178 aaKnown RBP11.76□□□□□ -0.53
CIRBP-241ENST00000593048 HRH4Q9H3N8 390 aa11.76□□□□□ -0.53
CIRBP-241ENST00000593048 ZFP92A6NM28 416 aa11.75□□□□□ -0.53
CIRBP-241ENST00000593048 PSG1P11464 419 aa11.75□□□□□ -0.53
CIRBP-241ENST00000593048 MIFP14174 115 aa11.75□□□□□ -0.53
CIRBP-241ENST00000593048 M6PRP20645 277 aa11.75□□□□□ -0.53
CIRBP-241ENST00000593048 PPT1P50897 306 aa11.75□□□□□ -0.53
CIRBP-241ENST00000593048 SIGLEC15Q6ZMC9 328 aa11.75□□□□□ -0.53
CIRBP-241ENST00000593048 OR51G1Q8NGK1 321 aa11.75□□□□□ -0.53
CIRBP-241ENST00000593048 SLC35E1Q96K37 410 aa11.75□□□□□ -0.53
CIRBP-241ENST00000593048 RSG1Q9BU20 258 aa11.75□□□□□ -0.53
CIRBP-241ENST00000593048 CLEC5AQ9NY25 188 aa11.75□□□□□ -0.53
CIRBP-241ENST00000593048 IGHV4-28A0A0C4DH34 117 aa11.74□□□□□ -0.53
CIRBP-241ENST00000593048 BUB3O43684 328 aa11.74□□□□□ -0.53
CIRBP-241ENST00000593048 GIG44P09565 113 aaPredicted RBP11.74□□□□□ -0.53
CIRBP-241ENST00000593048 NUTF2P61970 127 aaKnown RBP11.74□□□□□ -0.53
CIRBP-241ENST00000593048 SELENOTP62341 195 aa11.74□□□□□ -0.53
CIRBP-241ENST00000593048 Q8NAQ8 132 aa11.74□□□□□ -0.53
CIRBP-241ENST00000593048 ACTR3CQ9C0K3 210 aaPredicted RBP11.74□□□□□ -0.53
CIRBP-241ENST00000593048 NRN1Q9NPD7 142 aa11.74□□□□□ -0.53
CIRBP-241ENST00000593048 RPRMQ9NS64 109 aa11.74□□□□□ -0.53
CIRBP-241ENST00000593048 CTXND1A0A1B0GTU2 59 aa11.73□□□□□ -0.53
CIRBP-241ENST00000593048 IGLL5B9A064 214 aa11.73□□□□□ -0.53
CIRBP-241ENST00000593048 C11orf94C9JXX5 98 aa11.73□□□□□ -0.53
CIRBP-241ENST00000593048 TOR2AQ5JU69 321 aa11.73□□□□□ -0.53
CIRBP-241ENST00000593048 RPP25LQ8N5L8 163 aaKnown RBP11.73□□□□□ -0.53
CIRBP-241ENST00000593048 RNF125Q96EQ8 232 aa11.73□□□□□ -0.53
CIRBP-241ENST00000593048 TMEM218A2RU14 115 aa11.72□□□□□ -0.53
CIRBP-241ENST00000593048 SMCO3A2RU48 225 aa11.72□□□□□ -0.53
CIRBP-241ENST00000593048 IFNA1P01562 189 aa11.72□□□□□ -0.53
CIRBP-241ENST00000593048 FABP1P07148 127 aa11.72□□□□□ -0.53
CIRBP-241ENST00000593048 RBMY1A1P0DJD3 496 aaKnown RBP11.72□□□□□ -0.53
CIRBP-241ENST00000593048 RBMY1CP0DJD4 496 aa11.72□□□□□ -0.53
CIRBP-241ENST00000593048 TCTAP57738 103 aa11.72□□□□□ -0.53
CIRBP-241ENST00000593048 AKR1C1Q04828 323 aa11.72□□□□□ -0.53
CIRBP-241ENST00000593048 GAMTQ14353 236 aa11.72□□□□□ -0.53
CIRBP-241ENST00000593048 RBMY1FQ15415 496 aaKnown RBP11.72□□□□□ -0.53
CIRBP-241ENST00000593048 FFAR4Q5NUL3 377 aa11.72□□□□□ -0.53
CIRBP-241ENST00000593048 SUN5Q8TC36 379 aa11.72□□□□□ -0.53
CIRBP-241ENST00000593048 C1QTNF4Q9BXJ3 329 aa11.72□□□□□ -0.53
CIRBP-241ENST00000593048 SEPSECSQ9HD40 501 aaKnown RBP11.72□□□□□ -0.53
CIRBP-241ENST00000593048 SLC39A9Q9NUM3 307 aa11.72□□□□□ -0.53
CIRBP-241ENST00000593048 LYZP61626 148 aa11.71□□□□□ -0.53
CIRBP-241ENST00000593048 ZNF90Q03938 601 aa11.71□□□□□ -0.53
CIRBP-241ENST00000593048 C10orf91Q5T1B1 145 aa11.71□□□□□ -0.53
CIRBP-241ENST00000593048 THAP8Q8NA92 274 aa11.71□□□□□ -0.53
CIRBP-241ENST00000593048 OR10G4Q8NGN3 311 aa11.71□□□□□ -0.53
CIRBP-241ENST00000593048 OR10G9Q8NGN4 311 aa11.71□□□□□ -0.53
CIRBP-241ENST00000593048 OR10G7Q8NGN6 311 aa11.71□□□□□ -0.53
CIRBP-241ENST00000593048 SFT2D1Q8WV19 159 aa11.71□□□□□ -0.53
CIRBP-241ENST00000593048 TXNDC17Q9BRA2 123 aa11.71□□□□□ -0.53
CIRBP-241ENST00000593048 SEC11CQ9BY50 192 aa11.71□□□□□ -0.53
CIRBP-241ENST00000593048 AGPAT2O15120 278 aa11.7□□□□□ -0.54
CIRBP-241ENST00000593048 HLA-DMBP28068 263 aa11.7□□□□□ -0.54
CIRBP-241ENST00000593048 PSMB3P49720 205 aa11.7□□□□□ -0.54
CIRBP-241ENST00000593048 PRR20EP86478 221 aa11.7□□□□□ -0.54
CIRBP-241ENST00000593048 PRR20CP86479 221 aa11.7□□□□□ -0.54
CIRBP-241ENST00000593048 PRR20DP86480 221 aa11.7□□□□□ -0.54
CIRBP-241ENST00000593048 PRR20BP86481 221 aa11.7□□□□□ -0.54
CIRBP-241ENST00000593048 PRR20AP86496 221 aa11.7□□□□□ -0.54
CIRBP-241ENST00000593048 GUK1Q16774 197 aa11.7□□□□□ -0.54
CIRBP-241ENST00000593048 KHDC3LQ587J8 217 aa11.7□□□□□ -0.54
CIRBP-241ENST00000593048 LINC00052Q96N35 136 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms