RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 RBPMS2Q6ZRY4 209 aaKnown RBP11.63□□□□□ -0.55
RETREG3-208ENST00000589797 AP5S1Q9NUS5 200 aa11.63□□□□□ -0.55
RETREG3-208ENST00000589797 KAAG1Q9UBP8 84 aa11.63□□□□□ -0.55
RETREG3-208ENST00000589797 TRAV41A0A0B4J266 112 aa11.62□□□□□ -0.55
RETREG3-208ENST00000589797 APOHP02749 345 aaPredicted RBP11.62□□□□□ -0.55
RETREG3-208ENST00000589797 RNF182Q8N6D2 247 aa11.62□□□□□ -0.55
RETREG3-208ENST00000589797 BEND2Q8NDZ0 799 aa11.62□□□□□ -0.55
RETREG3-208ENST00000589797 NUP35Q8NFH5 326 aa11.62□□□□□ -0.55
RETREG3-208ENST00000589797 FMC1Q96HJ9 113 aa11.62□□□□□ -0.55
RETREG3-208ENST00000589797 DMRT1Q9Y5R6 373 aa11.62□□□□□ -0.55
RETREG3-208ENST00000589797 A0A1B0GV90 55 aa11.62□□□□□ -0.55
RETREG3-208ENST00000589797 CBY3A6NI87 242 aa11.62□□□□□ -0.55
RETREG3-208ENST00000589797 IGHV2-70P01814 119 aa11.62□□□□□ -0.55
RETREG3-208ENST00000589797 TRBV20OR9-2A0A075B6H5 130 aa11.62□□□□□ -0.55
RETREG3-208ENST00000589797 SLC25A2Q9BXI2 301 aa11.62□□□□□ -0.55
RETREG3-208ENST00000589797 A0A1W2PS18 150 aa11.62□□□□□ -0.55
RETREG3-208ENST00000589797 A6NNC1 897 aa11.62□□□□□ -0.55
RETREG3-208ENST00000589797 M0R1W7 72 aa11.62□□□□□ -0.55
RETREG3-208ENST00000589797 SAPCD1Q5SSQ6 148 aa11.62□□□□□ -0.55
RETREG3-208ENST00000589797 CDPF1Q6NVV7 123 aa11.62□□□□□ -0.55
RETREG3-208ENST00000589797 LSM4Q9Y4Z0 139 aaKnown RBP11.62□□□□□ -0.55
RETREG3-208ENST00000589797 RNF223E7ERA6 249 aa11.61□□□□□ -0.55
RETREG3-208ENST00000589797 FOSL1P15407 271 aa11.61□□□□□ -0.55
RETREG3-208ENST00000589797 ZNF25P17030 456 aaPredicted RBP11.61□□□□□ -0.55
RETREG3-208ENST00000589797 ADGRG4Q8IZF6 3080 aa11.61□□□□□ -0.55
RETREG3-208ENST00000589797 DMXL2Q8TDJ6 3036 aa11.61□□□□□ -0.55
RETREG3-208ENST00000589797 CTAG1AP78358 180 aa11.61□□□□□ -0.55
RETREG3-208ENST00000589797 NCR2O95944 276 aa11.61□□□□□ -0.55
RETREG3-208ENST00000589797 CGB3P0DN86 165 aa11.61□□□□□ -0.55
RETREG3-208ENST00000589797 CGB7P0DN87 165 aa11.61□□□□□ -0.55
RETREG3-208ENST00000589797 ERCC8Q13216 396 aa11.61□□□□□ -0.55
RETREG3-208ENST00000589797 NCOR1P1Q9H4R4 102 aa11.61□□□□□ -0.55
RETREG3-208ENST00000589797 FRMD6-AS1P0C7T7 363 aa11.6□□□□□ -0.55
RETREG3-208ENST00000589797 PAX8Q06710 450 aa11.6□□□□□ -0.55
RETREG3-208ENST00000589797 ERASQ7Z444 233 aa11.6□□□□□ -0.55
RETREG3-208ENST00000589797 DMRTC2Q8IXT2 367 aaPredicted RBP11.6□□□□□ -0.55
RETREG3-208ENST00000589797 POU2AF1Q16633 256 aa11.6□□□□□ -0.55
RETREG3-208ENST00000589797 EVI2AP22794 236 aa11.6□□□□□ -0.55
RETREG3-208ENST00000589797 ZFP36P26651 326 aaKnown RBP11.6□□□□□ -0.55
RETREG3-208ENST00000589797 LINC00311Q8N616 119 aa11.6□□□□□ -0.55
RETREG3-208ENST00000589797 TSKUQ8WUA8 353 aa11.6□□□□□ -0.55
RETREG3-208ENST00000589797 IFITM10A6NMD0 228 aa11.59□□□□□ -0.55
RETREG3-208ENST00000589797 K7EN84 100 aa11.59□□□□□ -0.55
RETREG3-208ENST00000589797 HLA-DMBP28068 263 aa11.59□□□□□ -0.55
RETREG3-208ENST00000589797 RNASE4P34096 147 aaKnown RBP11.59□□□□□ -0.55
RETREG3-208ENST00000589797 FER1L6-AS1Q8NA97 138 aa11.59□□□□□ -0.55
RETREG3-208ENST00000589797 PRELID3AQ96N28 172 aa11.59□□□□□ -0.55
RETREG3-208ENST00000589797 GOLT1BQ9Y3E0 138 aa11.59□□□□□ -0.55
RETREG3-208ENST00000589797 IGLC1P0CG04 106 aa11.59□□□□□ -0.55
RETREG3-208ENST00000589797 RNF151Q2KHN1 245 aa11.59□□□□□ -0.55
RETREG3-208ENST00000589797 EBLN2Q6P2I7 272 aa11.59□□□□□ -0.55
RETREG3-208ENST00000589797 HSPB8Q9UJY1 196 aa11.59□□□□□ -0.55
RETREG3-208ENST00000589797 TRBV9A0A0B4J1U6 114 aa11.58□□□□□ -0.56
RETREG3-208ENST00000589797 MINOS1Q5TGZ0 78 aa11.58□□□□□ -0.56
RETREG3-208ENST00000589797 PATE2Q6UY27 113 aa11.58□□□□□ -0.56
RETREG3-208ENST00000589797 MINOS1-NBL1R4GNA1 71 aa11.58□□□□□ -0.56
RETREG3-208ENST00000589797 COL4A2P08572 1712 aa11.58□□□□□ -0.56
RETREG3-208ENST00000589797 ID1P41134 155 aa11.58□□□□□ -0.56
RETREG3-208ENST00000589797 OR4C46A6NHA9 309 aa11.58□□□□□ -0.56
RETREG3-208ENST00000589797 JOSD1Q15040 202 aaPredicted RBP11.58□□□□□ -0.56
RETREG3-208ENST00000589797 WDFY3Q8IZQ1 3526 aa11.57□□□□□ -0.56
RETREG3-208ENST00000589797 IGHV4-61A0A0C4DH41 118 aa11.57□□□□□ -0.56
RETREG3-208ENST00000589797 FABP5P3A8MUU1 101 aa11.57□□□□□ -0.56
RETREG3-208ENST00000589797 F2Z2F3 143 aa11.57□□□□□ -0.56
RETREG3-208ENST00000589797 SMKR1H3BMG3 65 aa11.57□□□□□ -0.56
RETREG3-208ENST00000589797 SP5Q6BEB4 398 aaPredicted RBP11.57□□□□□ -0.56
RETREG3-208ENST00000589797 NIT1Q86X76 327 aa11.57□□□□□ -0.56
RETREG3-208ENST00000589797 BEX4Q9NWD9 120 aaPredicted RBP11.57□□□□□ -0.56
RETREG3-208ENST00000589797 MOB4Q9Y3A3 225 aa11.57□□□□□ -0.56
RETREG3-208ENST00000589797 P0C879 139 aa11.57□□□□□ -0.56
RETREG3-208ENST00000589797 ACTL10Q5JWF8 245 aa11.57□□□□□ -0.56
RETREG3-208ENST00000589797 C19orf84I3L1E1 186 aa11.56□□□□□ -0.56
RETREG3-208ENST00000589797 ZNF688P0C7X2 276 aa11.56□□□□□ -0.56
RETREG3-208ENST00000589797 UBE2E1P51965 193 aa11.56□□□□□ -0.56
RETREG3-208ENST00000589797 RNF5Q99942 180 aa11.56□□□□□ -0.56
RETREG3-208ENST00000589797 GNB1LQ9BYB4 327 aa11.56□□□□□ -0.56
RETREG3-208ENST00000589797 DSCAML1Q8TD84 2053 aa11.56□□□□□ -0.56
RETREG3-208ENST00000589797 TNRC18O15417 2968 aaPredicted RBP11.56□□□□□ -0.56
RETREG3-208ENST00000589797 B4DSR2 109 aa11.56□□□□□ -0.56
RETREG3-208ENST00000589797 ZNF324O75467 553 aaPredicted RBP11.56□□□□□ -0.56
RETREG3-208ENST00000589797 LYZL1Q6UWQ5 148 aa11.56□□□□□ -0.56
RETREG3-208ENST00000589797 TMEM75Q8N9X5 138 aa11.56□□□□□ -0.56
RETREG3-208ENST00000589797 IGHV2-70DA0A0C4DH43 119 aa11.56□□□□□ -0.56
RETREG3-208ENST00000589797 OVOL3O00110 214 aa11.56□□□□□ -0.56
RETREG3-208ENST00000589797 VWC2Q2TAL6 325 aa11.56□□□□□ -0.56
RETREG3-208ENST00000589797 FXYD5Q96DB9 178 aa11.56□□□□□ -0.56
RETREG3-208ENST00000589797 C8orf49Q96NF6 230 aa11.56□□□□□ -0.56
RETREG3-208ENST00000589797 ZZEF1O43149 2961 aa11.56□□□□□ -0.56
RETREG3-208ENST00000589797 SPRY2O43597 315 aa11.55□□□□□ -0.56
RETREG3-208ENST00000589797 IGLV1-47P01700 117 aa11.55□□□□□ -0.56
RETREG3-208ENST00000589797 ARMS2P0C7Q2 107 aa11.55□□□□□ -0.56
RETREG3-208ENST00000589797 Q8N7P7 452 aa11.55□□□□□ -0.56
RETREG3-208ENST00000589797 FAM159AQ6UWV7 190 aa11.55□□□□□ -0.56
RETREG3-208ENST00000589797 SHANK2-AS3Q9BTD1 123 aa11.55□□□□□ -0.56
RETREG3-208ENST00000589797 TMEM70Q9BUB7 260 aa11.55□□□□□ -0.56
RETREG3-208ENST00000589797 LOC102724200A0A096LPH7 203 aaPredicted RBP11.55□□□□□ -0.56
RETREG3-208ENST00000589797 A0A0G2JLM5 398 aa11.55□□□□□ -0.56
RETREG3-208ENST00000589797 C7orf71A4D174 169 aa11.55□□□□□ -0.56
RETREG3-208ENST00000589797 IGHV2-5P01817 119 aa11.55□□□□□ -0.56
RETREG3-208ENST00000589797 OR10AG1Q8NH19 301 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms