RNA–Protein interactions for RNA: ENST00000588552.5

PTPRS-206, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 1 (best)

Gene PTPRS, Length 5,443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-206ENST00000588552 HIST1H2BKO60814 126 aa12.44□□□□□ -0.42
PTPRS-206ENST00000588552 HIST1H2BJP06899 126 aa12.44□□□□□ -0.42
PTPRS-206ENST00000588552 HIST1H2BOP23527 126 aa12.44□□□□□ -0.42
PTPRS-206ENST00000588552 HIST1H2BBP33778 126 aa12.44□□□□□ -0.42
PTPRS-206ENST00000588552 HIST1H2BDP58876 126 aa12.44□□□□□ -0.42
PTPRS-206ENST00000588552 HIST1H2BCP62807 126 aa12.44□□□□□ -0.42
PTPRS-206ENST00000588552 HIST2H2BEQ16778 126 aa12.44□□□□□ -0.42
PTPRS-206ENST00000588552 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.44□□□□□ -0.42
PTPRS-206ENST00000588552 HIST1H2BHQ93079 126 aa12.44□□□□□ -0.42
PTPRS-206ENST00000588552 HIST1H2BNQ99877 126 aa12.44□□□□□ -0.42
PTPRS-206ENST00000588552 HIST1H2BMQ99879 126 aa12.44□□□□□ -0.42
PTPRS-206ENST00000588552 ZMAT5Q9UDW3 170 aaKnown RBP12.44□□□□□ -0.42
PTPRS-206ENST00000588552 WIPF3A6NGB9 483 aa12.44□□□□□ -0.42
PTPRS-206ENST00000588552 SNAI2O43623 268 aa12.44□□□□□ -0.42
PTPRS-206ENST00000588552 IGHV2-5P01817 119 aa12.44□□□□□ -0.42
PTPRS-206ENST00000588552 GFI1BQ5VTD9 330 aa12.44□□□□□ -0.42
PTPRS-206ENST00000588552 CTSZQ9UBR2 303 aa12.44□□□□□ -0.42
PTPRS-206ENST00000588552 PDE6HQ13956 83 aa12.44□□□□□ -0.42
PTPRS-206ENST00000588552 Q8NFD4 153 aa12.44□□□□□ -0.42
PTPRS-206ENST00000588552 CXCL1P09341 107 aa12.44□□□□□ -0.42
PTPRS-206ENST00000588552 C3orf56Q8N813 242 aa12.44□□□□□ -0.42
PTPRS-206ENST00000588552 MRPS16Q9Y3D3 137 aaKnown RBP12.44□□□□□ -0.42
PTPRS-206ENST00000588552 ST6GALNAC6Q969X2 333 aa12.44□□□□□ -0.42
PTPRS-206ENST00000588552 PRDM13Q9H4Q3 707 aa12.44□□□□□ -0.42
PTPRS-206ENST00000588552 NIT1Q86X76 327 aa12.43□□□□□ -0.42
PTPRS-206ENST00000588552 COTL1Q14019 142 aa12.43□□□□□ -0.42
PTPRS-206ENST00000588552 KRTAP27-1Q3LI81 207 aa12.43□□□□□ -0.42
PTPRS-206ENST00000588552 SPRNQ5BIV9 151 aa12.43□□□□□ -0.42
PTPRS-206ENST00000588552 WT1-ASQ06250 92 aa12.43□□□□□ -0.42
PTPRS-206ENST00000588552 ZNF415Q09FC8 603 aa12.43□□□□□ -0.42
PTPRS-206ENST00000588552 TTC9CQ8N5M4 171 aa12.43□□□□□ -0.42
PTPRS-206ENST00000588552 LINC01619G3V211 115 aa12.42□□□□□ -0.42
PTPRS-206ENST00000588552 TCF21O43680 179 aa12.42□□□□□ -0.42
PTPRS-206ENST00000588552 SMIM12Q96EX1 92 aa12.42□□□□□ -0.42
PTPRS-206ENST00000588552 TRGV1A0A0A0MS02 117 aa12.42□□□□□ -0.42
PTPRS-206ENST00000588552 IGHV3-73A0A0B4J1V6 119 aa12.42□□□□□ -0.42
PTPRS-206ENST00000588552 INSP01308 110 aa12.42□□□□□ -0.42
PTPRS-206ENST00000588552 RNASE1P07998 156 aaKnown RBP12.42□□□□□ -0.42
PTPRS-206ENST00000588552 CTAG1AP78358 180 aa12.42□□□□□ -0.42
PTPRS-206ENST00000588552 ERCC8Q13216 396 aa12.42□□□□□ -0.42
PTPRS-206ENST00000588552 CFAP161Q6P656 301 aa12.42□□□□□ -0.42
PTPRS-206ENST00000588552 UBE2E2Q96LR5 201 aa12.42□□□□□ -0.42
PTPRS-206ENST00000588552 NCR2O95944 276 aa12.42□□□□□ -0.42
PTPRS-206ENST00000588552 ADORA2A-AS1P86434 159 aa12.42□□□□□ -0.42
PTPRS-206ENST00000588552 FAM120AOSQ5T036 256 aa12.42□□□□□ -0.42
PTPRS-206ENST00000588552 CHCHD1Q96BP2 118 aaKnown RBP12.42□□□□□ -0.42
PTPRS-206ENST00000588552 C1QTNF4Q9BXJ3 329 aa12.42□□□□□ -0.42
PTPRS-206ENST00000588552 FGF23Q9GZV9 251 aaPredicted RBP12.42□□□□□ -0.42
PTPRS-206ENST00000588552 IGKV3D-20A0A0C4DH25 116 aa12.41□□□□□ -0.42
PTPRS-206ENST00000588552 Q86TA4 180 aa12.41□□□□□ -0.42
PTPRS-206ENST00000588552 PRR31Q5SQ13 230 aa12.41□□□□□ -0.42
PTPRS-206ENST00000588552 Q71RC1 249 aaPredicted RBP12.41□□□□□ -0.42
PTPRS-206ENST00000588552 CHCHD5Q9BSY4 110 aa12.41□□□□□ -0.42
PTPRS-206ENST00000588552 ADAMTS9Q9P2N4 1935 aa12.41□□□□□ -0.42
PTPRS-206ENST00000588552 DEFB131AP59861 70 aa12.41□□□□□ -0.42
PTPRS-206ENST00000588552 C1orf122Q6ZSJ8 110 aa12.41□□□□□ -0.42
PTPRS-206ENST00000588552 NUP35Q8NFH5 326 aa12.41□□□□□ -0.42
PTPRS-206ENST00000588552 D6R8Y8 96 aa12.41□□□□□ -0.42
PTPRS-206ENST00000588552 LHBP01229 141 aa12.41□□□□□ -0.42
PTPRS-206ENST00000588552 CD28P10747 220 aa12.41□□□□□ -0.42
PTPRS-206ENST00000588552 LINC00479Q96M42 142 aa12.41□□□□□ -0.42
PTPRS-206ENST00000588552 PRADC1Q9BSG0 188 aa12.41□□□□□ -0.42
PTPRS-206ENST00000588552 SMIM13P0DJ93 91 aa12.4□□□□□ -0.42
PTPRS-206ENST00000588552 MALP21145 153 aa12.4□□□□□ -0.42
PTPRS-206ENST00000588552 DEFB121Q5J5C9 76 aa12.4□□□□□ -0.42
PTPRS-206ENST00000588552 COLCA2A8K830 154 aa12.4□□□□□ -0.42
PTPRS-206ENST00000588552 RASL11AQ6T310 242 aa12.4□□□□□ -0.42
PTPRS-206ENST00000588552 SEM1Q6ZVN7 128 aa12.4□□□□□ -0.42
PTPRS-206ENST00000588552 COL4A3Q01955 1670 aa12.4□□□□□ -0.42
PTPRS-206ENST00000588552 HOXB4P17483 251 aaPredicted RBP12.4□□□□□ -0.42
PTPRS-206ENST00000588552 TMEM249Q2WGJ8 235 aa12.4□□□□□ -0.42
PTPRS-206ENST00000588552 IL17RELQ6ZVW7 336 aa12.4□□□□□ -0.42
PTPRS-206ENST00000588552 DTX2Q86UW9 622 aa12.4□□□□□ -0.42
PTPRS-206ENST00000588552 LOC102724200A0A096LPH7 203 aaPredicted RBP12.4□□□□□ -0.43
PTPRS-206ENST00000588552 TDGF1P3P51864 188 aa12.4□□□□□ -0.43
PTPRS-206ENST00000588552 RNF182Q8N6D2 247 aa12.4□□□□□ -0.43
PTPRS-206ENST00000588552 C8orf31Q8N9H6 132 aa12.39□□□□□ -0.43
PTPRS-206ENST00000588552 DPH3P1Q9H4G8 78 aa12.39□□□□□ -0.43
PTPRS-206ENST00000588552 OBSL1O75147 1896 aa12.39□□□□□ -0.43
PTPRS-206ENST00000588552 DPM2O94777 84 aa12.38□□□□□ -0.43
PTPRS-206ENST00000588552 LAGE3Q14657 143 aa12.38□□□□□ -0.43
PTPRS-206ENST00000588552 FAM90A2PQ658T7 463 aa12.38□□□□□ -0.43
PTPRS-206ENST00000588552 OR9G4Q8NGQ1 327 aa12.38□□□□□ -0.43
PTPRS-206ENST00000588552 HOXA3O43365 443 aaPredicted RBP12.38□□□□□ -0.43
PTPRS-206ENST00000588552 IGHV3-53P01767 116 aa12.38□□□□□ -0.43
PTPRS-206ENST00000588552 ADARB2-AS1A8MUL3 147 aa12.37□□□□□ -0.43
PTPRS-206ENST00000588552 ZNF876PQ49A33 203 aa12.37□□□□□ -0.43
PTPRS-206ENST00000588552 SLC25A2Q9BXI2 301 aa12.37□□□□□ -0.43
PTPRS-206ENST00000588552 CHTOPQ9Y3Y2 248 aaKnown RBP12.37□□□□□ -0.43
PTPRS-206ENST00000588552 IFI27L1Q96BM0 104 aa12.37□□□□□ -0.43
PTPRS-206ENST00000588552 NDUFA4O00483 81 aa12.37□□□□□ -0.43
PTPRS-206ENST00000588552 Q6ZSR3 168 aa12.37□□□□□ -0.43
PTPRS-206ENST00000588552 C14orf178Q8N769 122 aaPredicted RBP12.37□□□□□ -0.43
PTPRS-206ENST00000588552 KLF2Q9Y5W3 355 aaPredicted RBP12.37□□□□□ -0.43
PTPRS-206ENST00000588552 CRPP02741 224 aa12.37□□□□□ -0.43
PTPRS-206ENST00000588552 RPL36AP83881 106 aaKnown RBP12.37□□□□□ -0.43
PTPRS-206ENST00000588552 RPL36ALQ969Q0 106 aaKnown RBP12.37□□□□□ -0.43
PTPRS-206ENST00000588552 DOPEY2Q9Y3R5 2298 aa12.37□□□□□ -0.43
PTPRS-206ENST00000588552 TRBV19A0A075B6N1 114 aa12.36□□□□□ -0.43
PTPRS-206ENST00000588552 POU2AF1Q16633 256 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms