RNA–Protein interactions for RNA: ENST00000588059.5

VPS4B-202, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-202ENST00000588059 CYP2G1PQ6ZSU1 146 aa7.72□□□□□ -1.17
VPS4B-202ENST00000588059 OR4B1Q8NGF8 309 aa7.72□□□□□ -1.17
VPS4B-202ENST00000588059 C2orf50Q96LR7 162 aa7.72□□□□□ -1.17
VPS4B-202ENST00000588059 LINC00052Q96N35 136 aa7.72□□□□□ -1.17
VPS4B-202ENST00000588059 TMEM147Q9BVK8 224 aa7.72□□□□□ -1.17
VPS4B-202ENST00000588059 KRTAP1-5Q9BYS1 174 aa7.72□□□□□ -1.17
VPS4B-202ENST00000588059 SLC25A22Q9H936 323 aa7.72□□□□□ -1.17
VPS4B-202ENST00000588059 GPN1Q9HCN4 374 aaPredicted RBP7.72□□□□□ -1.17
VPS4B-202ENST00000588059 DOK5Q9P104 306 aa7.72□□□□□ -1.17
VPS4B-202ENST00000588059 K7EPK0 472 aa7.71□□□□□ -1.18
VPS4B-202ENST00000588059 SOCS3O14543 225 aa7.71□□□□□ -1.18
VPS4B-202ENST00000588059 NUDT3O95989 172 aa7.71□□□□□ -1.18
VPS4B-202ENST00000588059 PVALBP20472 110 aaPredicted RBP7.71□□□□□ -1.18
VPS4B-202ENST00000588059 S100A7P31151 101 aa7.71□□□□□ -1.18
VPS4B-202ENST00000588059 ID1P41134 155 aa7.71□□□□□ -1.18
VPS4B-202ENST00000588059 PSMB3P49720 205 aa7.71□□□□□ -1.18
VPS4B-202ENST00000588059 CAV2P51636 162 aa7.71□□□□□ -1.18
VPS4B-202ENST00000588059 CCL18P55774 89 aa7.71□□□□□ -1.18
VPS4B-202ENST00000588059 PSG9Q00887 426 aa7.71□□□□□ -1.18
VPS4B-202ENST00000588059 NPVFQ9HCQ7 196 aa7.71□□□□□ -1.18
VPS4B-202ENST00000588059 VPS13BQ7Z7G8 4022 aa7.71□□□□□ -1.18
VPS4B-202ENST00000588059 ZNF98A6NK75 572 aa7.7□□□□□ -1.18
VPS4B-202ENST00000588059 F6UB75 175 aa7.7□□□□□ -1.18
VPS4B-202ENST00000588059 OR5G3P0C626 314 aa7.7□□□□□ -1.18
VPS4B-202ENST00000588059 LINC00869P0C866 280 aa7.7□□□□□ -1.18
VPS4B-202ENST00000588059 BTF3P20290 206 aaKnown RBP7.7□□□□□ -1.18
VPS4B-202ENST00000588059 GALR1P47211 349 aa7.7□□□□□ -1.18
VPS4B-202ENST00000588059 DEFA1P59665 94 aa7.7□□□□□ -1.18
VPS4B-202ENST00000588059 DEFA3P59666 94 aa7.7□□□□□ -1.18
VPS4B-202ENST00000588059 RAP2BP61225 183 aa7.7□□□□□ -1.18
VPS4B-202ENST00000588059 SLC38A11Q08AI6 406 aa7.7□□□□□ -1.18
VPS4B-202ENST00000588059 ARL16Q0P5N6 197 aa7.7□□□□□ -1.18
VPS4B-202ENST00000588059 FAM78BQ5VT40 261 aa7.7□□□□□ -1.18
VPS4B-202ENST00000588059 SPATA31B1PQ5VZV4 182 aa7.7□□□□□ -1.18
VPS4B-202ENST00000588059 TEPPQ6URK8 271 aa7.7□□□□□ -1.18
VPS4B-202ENST00000588059 NRARPQ7Z6K4 114 aa7.7□□□□□ -1.18
VPS4B-202ENST00000588059 SLC25A32Q9H2D1 315 aa7.7□□□□□ -1.18
VPS4B-202ENST00000588059 SLC45A2Q9UMX9 530 aa7.7□□□□□ -1.18
VPS4B-202ENST00000588059 FLG2Q5D862 2391 aaPredicted RBP7.7□□□□□ -1.18
VPS4B-202ENST00000588059 FAM24AA6NFZ4 105 aa7.69□□□□□ -1.18
VPS4B-202ENST00000588059 LYRM9A8MSI8 78 aa7.69□□□□□ -1.18
VPS4B-202ENST00000588059 FNDC10F2Z333 226 aa7.69□□□□□ -1.18
VPS4B-202ENST00000588059 F5H768 121 aa7.69□□□□□ -1.18
VPS4B-202ENST00000588059 INMT-MINDY4F8WBC2 141 aa7.69□□□□□ -1.18
VPS4B-202ENST00000588059 GOSR2O14653 212 aa7.69□□□□□ -1.18
VPS4B-202ENST00000588059 HYPMO75409 117 aa7.69□□□□□ -1.18
VPS4B-202ENST00000588059 CST7O76096 145 aa7.69□□□□□ -1.18
VPS4B-202ENST00000588059 DEFB130BP0DP73 79 aa7.69□□□□□ -1.18
VPS4B-202ENST00000588059 DEFB130AP0DP74 79 aa7.69□□□□□ -1.18
VPS4B-202ENST00000588059 SELENOTP62341 195 aa7.69□□□□□ -1.18
VPS4B-202ENST00000588059 RAB32Q13637 225 aa7.69□□□□□ -1.18
VPS4B-202ENST00000588059 TTC32Q5I0X7 151 aa7.69□□□□□ -1.18
VPS4B-202ENST00000588059 SSX7Q7RTT5 188 aa7.69□□□□□ -1.18
VPS4B-202ENST00000588059 RNF141Q8WVD5 230 aa7.69□□□□□ -1.18
VPS4B-202ENST00000588059 C16orf92Q96LL3 132 aa7.69□□□□□ -1.18
VPS4B-202ENST00000588059 IGF2BP2-AS1Q96M15 143 aa7.69□□□□□ -1.18
VPS4B-202ENST00000588059 RSG1Q9BU20 258 aa7.69□□□□□ -1.18
VPS4B-202ENST00000588059 HIGD1AQ9Y241 93 aa7.69□□□□□ -1.18
VPS4B-202ENST00000588059 A0A0J9YX75 114 aa7.68□□□□□ -1.18
VPS4B-202ENST00000588059 A8MTW9 85 aa7.68□□□□□ -1.18
VPS4B-202ENST00000588059 PRAF2O60831 178 aa7.68□□□□□ -1.18
VPS4B-202ENST00000588059 SIX6O95475 246 aa7.68□□□□□ -1.18
VPS4B-202ENST00000588059 PRM2P04554 102 aa7.68□□□□□ -1.18
VPS4B-202ENST00000588059 FGL1Q08830 312 aa7.68□□□□□ -1.18
VPS4B-202ENST00000588059 Q5VSD8 79 aa7.68□□□□□ -1.18
VPS4B-202ENST00000588059 EBLN2Q6P2I7 272 aa7.68□□□□□ -1.18
VPS4B-202ENST00000588059 AMTNQ6UX39 209 aa7.68□□□□□ -1.18
VPS4B-202ENST00000588059 LYPD1Q8N2G4 141 aa7.68□□□□□ -1.18
VPS4B-202ENST00000588059 GPR82Q96P67 336 aa7.68□□□□□ -1.18
VPS4B-202ENST00000588059 UHRF2Q96PU4 802 aa7.68□□□□□ -1.18
VPS4B-202ENST00000588059 TMEM208Q9BTX3 173 aa7.68□□□□□ -1.18
VPS4B-202ENST00000588059 GGACTQ9BVM4 153 aa7.68□□□□□ -1.18
VPS4B-202ENST00000588059 SLC25A39Q9BZJ4 359 aaPredicted RBP7.68□□□□□ -1.18
VPS4B-202ENST00000588059 ARL6Q9H0F7 186 aa7.68□□□□□ -1.18
VPS4B-202ENST00000588059 Q9H3A6 140 aa7.68□□□□□ -1.18
VPS4B-202ENST00000588059 Q9H8V8 135 aa7.68□□□□□ -1.18
VPS4B-202ENST00000588059 PLAC8L1A1L4L8 177 aa7.67□□□□□ -1.18
VPS4B-202ENST00000588059 ZNF705GA8MUZ8 300 aaPredicted RBP7.67□□□□□ -1.18
VPS4B-202ENST00000588059 H3BRN7 92 aa7.67□□□□□ -1.18
VPS4B-202ENST00000588059 ISLRO14498 428 aa7.67□□□□□ -1.18
VPS4B-202ENST00000588059 AGPAT2O15120 278 aa7.67□□□□□ -1.18
VPS4B-202ENST00000588059 ATP5G1P05496 136 aa7.67□□□□□ -1.18
VPS4B-202ENST00000588059 ATP5G3P48201 142 aa7.67□□□□□ -1.18
VPS4B-202ENST00000588059 MEOX2P50222 304 aa7.67□□□□□ -1.18
VPS4B-202ENST00000588059 XGP55808 180 aa7.67□□□□□ -1.18
VPS4B-202ENST00000588059 CLINT1Q14677 625 aa7.67□□□□□ -1.18
VPS4B-202ENST00000588059 SAMD13Q5VXD3 122 aa7.67□□□□□ -1.18
VPS4B-202ENST00000588059 S100A7AQ86SG5 101 aa7.67□□□□□ -1.18
VPS4B-202ENST00000588059 ZNF546Q86UE3 836 aa7.67□□□□□ -1.18
VPS4B-202ENST00000588059 SHANK2-AS3Q9BTD1 123 aa7.67□□□□□ -1.18
VPS4B-202ENST00000588059 C11orf1Q9H5F2 150 aa7.67□□□□□ -1.18
VPS4B-202ENST00000588059 LYRM2Q9NU23 88 aaPredicted RBP7.67□□□□□ -1.18
VPS4B-202ENST00000588059 IGSF23A1L1A6 192 aa7.66□□□□□ -1.18
VPS4B-202ENST00000588059 SSNA1O43805 119 aa7.66□□□□□ -1.18
VPS4B-202ENST00000588059 RLN2P04090 185 aa7.66□□□□□ -1.18
VPS4B-202ENST00000588059 RPL7P18124 248 aaKnown RBP7.66□□□□□ -1.18
VPS4B-202ENST00000588059 TSPOP30536 169 aa7.66□□□□□ -1.18
VPS4B-202ENST00000588059 SULT1A1P50225 295 aa7.66□□□□□ -1.18
VPS4B-202ENST00000588059 PLP1P60201 277 aa7.66□□□□□ -1.18
VPS4B-202ENST00000588059 HBG1P69891 147 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms