RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 C21orf62Q9NYP8 219 aa6.2□□□□□ -1.42
SDF2-204ENST00000587338 TIMM9Q9Y5J7 89 aa6.2□□□□□ -1.42
SDF2-204ENST00000587338 PXMP4Q9Y6I8 212 aa6.2□□□□□ -1.42
SDF2-204ENST00000587338 DEFB131BA0A096LNP1 70 aa6.19□□□□□ -1.42
SDF2-204ENST00000587338 IGHV3-49A0A0A0MS15 119 aa6.19□□□□□ -1.42
SDF2-204ENST00000587338 A0A1B0GV50 99 aa6.19□□□□□ -1.42
SDF2-204ENST00000587338 C16orf90A8MZG2 172 aa6.19□□□□□ -1.42
SDF2-204ENST00000587338 UMAD1C9J7I0 102 aa6.19□□□□□ -1.42
SDF2-204ENST00000587338 NDUFA4O00483 81 aa6.19□□□□□ -1.42
SDF2-204ENST00000587338 CLN5O75503 358 aa6.19□□□□□ -1.42
SDF2-204ENST00000587338 CDK2AP2O75956 126 aa6.19□□□□□ -1.42
SDF2-204ENST00000587338 FABP1P07148 127 aa6.19□□□□□ -1.42
SDF2-204ENST00000587338 CMC4P56277 68 aaPredicted RBP6.19□□□□□ -1.42
SDF2-204ENST00000587338 RAB2AP61019 212 aa6.19□□□□□ -1.42
SDF2-204ENST00000587338 B2MP61769 119 aa6.19□□□□□ -1.42
SDF2-204ENST00000587338 SERF2P84101 59 aa6.19□□□□□ -1.42
SDF2-204ENST00000587338 ZNF90Q03938 601 aa6.19□□□□□ -1.42
SDF2-204ENST00000587338 TIGITQ495A1 244 aa6.19□□□□□ -1.42
SDF2-204ENST00000587338 TMEM41BQ5BJD5 291 aa6.19□□□□□ -1.42
SDF2-204ENST00000587338 SOHLH1Q5JUK2 328 aa6.19□□□□□ -1.42
SDF2-204ENST00000587338 LEMD1Q68G75 181 aa6.19□□□□□ -1.42
SDF2-204ENST00000587338 FAM122CQ6P4D5 195 aa6.19□□□□□ -1.42
SDF2-204ENST00000587338 Q6ZRG5 221 aa6.19□□□□□ -1.42
SDF2-204ENST00000587338 UBE2DNLQ8IWF7 75 aa6.19□□□□□ -1.42
SDF2-204ENST00000587338 THAP8Q8NA92 274 aa6.19□□□□□ -1.42
SDF2-204ENST00000587338 OR10G4Q8NGN3 311 aa6.19□□□□□ -1.42
SDF2-204ENST00000587338 OR10G9Q8NGN4 311 aa6.19□□□□□ -1.42
SDF2-204ENST00000587338 OR10G7Q8NGN6 311 aa6.19□□□□□ -1.42
SDF2-204ENST00000587338 LRRC20Q8TCA0 184 aa6.19□□□□□ -1.42
SDF2-204ENST00000587338 VN1R17PQ8TDU5 208 aa6.19□□□□□ -1.42
SDF2-204ENST00000587338 NDUFAF3Q9BU61 184 aa6.19□□□□□ -1.42
SDF2-204ENST00000587338 VSIRQ9H7M9 311 aa6.19□□□□□ -1.42
SDF2-204ENST00000587338 SLC39A9Q9NUM3 307 aa6.19□□□□□ -1.42
SDF2-204ENST00000587338 IGKV1OR2-108A0A075B7D4 117 aa6.18□□□□□ -1.42
SDF2-204ENST00000587338 TRAV30A0A087WSZ9 112 aa6.18□□□□□ -1.42
SDF2-204ENST00000587338 A0A1W2PPV4 95 aa6.18□□□□□ -1.42
SDF2-204ENST00000587338 NUPL2O15504 423 aaKnown RBP6.18□□□□□ -1.42
SDF2-204ENST00000587338 EIF3GO75821 320 aaKnown RBP eCLIP6.18□□□□□ -1.42
SDF2-204ENST00000587338 MBP02144 154 aa6.18□□□□□ -1.42
SDF2-204ENST00000587338 OR5G3P0C626 314 aa6.18□□□□□ -1.42
SDF2-204ENST00000587338 LINC00869P0C866 280 aa6.18□□□□□ -1.42
SDF2-204ENST00000587338 MIFP14174 115 aa6.18□□□□□ -1.42
SDF2-204ENST00000587338 ORM2P19652 201 aa6.18□□□□□ -1.42
SDF2-204ENST00000587338 RPL29P47914 159 aaKnown RBP6.18□□□□□ -1.42
SDF2-204ENST00000587338 FHITP49789 147 aa6.18□□□□□ -1.42
SDF2-204ENST00000587338 RAB5CP51148 216 aa6.18□□□□□ -1.42
SDF2-204ENST00000587338 LYZP61626 148 aa6.18□□□□□ -1.42
SDF2-204ENST00000587338 BLOC1S1P78537 153 aa6.18□□□□□ -1.42
SDF2-204ENST00000587338 SPSB3Q6PJ21 355 aa6.18□□□□□ -1.42
SDF2-204ENST00000587338 IQCF2Q8IXL9 164 aa6.18□□□□□ -1.42
SDF2-204ENST00000587338 TMEM116Q8NCL8 245 aa6.18□□□□□ -1.42
SDF2-204ENST00000587338 OR1B1Q8NGR6 318 aa6.18□□□□□ -1.42
SDF2-204ENST00000587338 TRGV9Q99603 122 aa6.18□□□□□ -1.42
SDF2-204ENST00000587338 TXN2Q99757 166 aa6.18□□□□□ -1.42
SDF2-204ENST00000587338 PBDC1Q9BVG4 233 aa6.18□□□□□ -1.42
SDF2-204ENST00000587338 RHPN1-AS1Q9BWJ2 59 aa6.18□□□□□ -1.42
SDF2-204ENST00000587338 ACTR3CQ9C0K3 210 aaPredicted RBP6.18□□□□□ -1.42
SDF2-204ENST00000587338 RPRMQ9NS64 109 aa6.18□□□□□ -1.42
SDF2-204ENST00000587338 DOK5Q9P104 306 aa6.18□□□□□ -1.42
SDF2-204ENST00000587338 SMPXQ9UHP9 88 aa6.18□□□□□ -1.42
SDF2-204ENST00000587338 SLC45A2Q9UMX9 530 aa6.18□□□□□ -1.42
SDF2-204ENST00000587338 CELA1Q9UNI1 258 aa6.18□□□□□ -1.42
SDF2-204ENST00000587338 LRP1BQ9NZR2 4599 aa6.18□□□□□ -1.42
SDF2-204ENST00000587338 APOBP04114 4563 aaKnown RBP6.18□□□□□ -1.42
SDF2-204ENST00000587338 IGKV1D-37A0A075B6S9 117 aa6.17□□□□□ -1.42
SDF2-204ENST00000587338 IGHV3OR16-13A0A075B7E8 117 aa6.17□□□□□ -1.42
SDF2-204ENST00000587338 ELOA3CA0A087WX78 387 aaPredicted RBP6.17□□□□□ -1.42
SDF2-204ENST00000587338 IGHV3-74A0A0B4J1X5 117 aa6.17□□□□□ -1.42
SDF2-204ENST00000587338 IGHV7-4-1A0A0J9YVY3 117 aa6.17□□□□□ -1.42
SDF2-204ENST00000587338 TEX46H3BTG2 121 aa6.17□□□□□ -1.42
SDF2-204ENST00000587338 K7EMT4 169 aa6.17□□□□□ -1.42
SDF2-204ENST00000587338 CHEK1O14757 476 aa6.17□□□□□ -1.42
SDF2-204ENST00000587338 HMGB3O15347 200 aaKnown RBP6.17□□□□□ -1.42
SDF2-204ENST00000587338 COX7A2P2O60397 106 aa6.17□□□□□ -1.42
SDF2-204ENST00000587338 YIF1AO95070 293 aa6.17□□□□□ -1.42
SDF2-204ENST00000587338 H2AFB1P0C5Y9 115 aa6.17□□□□□ -1.42
SDF2-204ENST00000587338 IGLC1P0CG04 106 aa6.17□□□□□ -1.42
SDF2-204ENST00000587338 RD3LP0DJH9 198 aa6.17□□□□□ -1.42
SDF2-204ENST00000587338 PSG1P11464 419 aa6.17□□□□□ -1.42
SDF2-204ENST00000587338 M6PRP20645 277 aa6.17□□□□□ -1.42
SDF2-204ENST00000587338 SELENOTP62341 195 aa6.17□□□□□ -1.42
SDF2-204ENST00000587338 GCSAMLQ5JQS6 135 aa6.17□□□□□ -1.42
SDF2-204ENST00000587338 CLLU1Q5K131 121 aa6.17□□□□□ -1.42
SDF2-204ENST00000587338 Q6ZR54 194 aa6.17□□□□□ -1.42
SDF2-204ENST00000587338 Q8WTZ3 238 aa6.17□□□□□ -1.42
SDF2-204ENST00000587338 SCRT1Q9BWW7 348 aa6.17□□□□□ -1.42
SDF2-204ENST00000587338 SLC25A22Q9H936 323 aa6.17□□□□□ -1.42
SDF2-204ENST00000587338 SRRM2Q9UQ35 2752 aaKnown RBP6.17□□□□□ -1.42
SDF2-204ENST00000587338 TOMM40O96008 361 aa6.16□□□□□ -1.42
SDF2-204ENST00000587338 NMBP08949 121 aa6.16□□□□□ -1.42
SDF2-204ENST00000587338 CDC34P49427 236 aaPredicted RBP6.16□□□□□ -1.42
SDF2-204ENST00000587338 FGF8P55075 233 aaPredicted RBP6.16□□□□□ -1.42
SDF2-204ENST00000587338 DEFB131AP59861 70 aa6.16□□□□□ -1.42
SDF2-204ENST00000587338 PAFAH1B2P68402 229 aa6.16□□□□□ -1.42
SDF2-204ENST00000587338 C1orf134Q5TEV5 83 aa6.16□□□□□ -1.42
SDF2-204ENST00000587338 PXDC1Q5TGL8 231 aa6.16□□□□□ -1.42
SDF2-204ENST00000587338 FAM78BQ5VT40 261 aa6.16□□□□□ -1.42
SDF2-204ENST00000587338 LCN15Q6UWW0 184 aa6.16□□□□□ -1.42
SDF2-204ENST00000587338 DPPA3Q6W0C5 159 aa6.16□□□□□ -1.42
SDF2-204ENST00000587338 STHQ8IWL8 128 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms